RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 PDZD9Q8IXQ8 264 aa13.29□□□□□ -0.28
DDX55-212ENST00000544738 ELMOD2Q8IZ81 293 aa13.29□□□□□ -0.28
DDX55-212ENST00000544738 PIP4P2Q8N4L2 257 aa13.29□□□□□ -0.28
DDX55-212ENST00000544738 LRTOMTQ8WZ04 291 aa13.29□□□□□ -0.28
DDX55-212ENST00000544738 DUS3LQ96G46 650 aaKnown RBP13.29□□□□□ -0.28
DDX55-212ENST00000544738 APOL4Q9BPW4 351 aa13.29□□□□□ -0.28
DDX55-212ENST00000544738 TTTY10Q9BZA0 68 aa13.29□□□□□ -0.28
DDX55-212ENST00000544738 GABARAPL1Q9H0R8 117 aa13.29□□□□□ -0.28
DDX55-212ENST00000544738 METTL8Q9H825 291 aaKnown RBP13.29□□□□□ -0.28
DDX55-212ENST00000544738 ADGRL4Q9HBW9 690 aa13.29□□□□□ -0.28
DDX55-212ENST00000544738 SIRT7Q9NRC8 400 aa13.29□□□□□ -0.28
DDX55-212ENST00000544738 GTF2A1LQ9UNN4 478 aa13.29□□□□□ -0.28
DDX55-212ENST00000544738 R4GMQ9 66 aa13.29□□□□□ -0.28
DDX55-212ENST00000544738 IGKV1D-17A0A075B6S4 117 aa13.28□□□□□ -0.28
DDX55-212ENST00000544738 A0A1W2PQ09 198 aa13.28□□□□□ -0.28
DDX55-212ENST00000544738 DHRS7CA6NNS2 312 aa13.28□□□□□ -0.28
DDX55-212ENST00000544738 M0R1W7 72 aa13.28□□□□□ -0.28
DDX55-212ENST00000544738 DLGAP1O14490 977 aa13.28□□□□□ -0.28
DDX55-212ENST00000544738 SRSF10O75494 262 aaKnown RBP13.28□□□□□ -0.28
DDX55-212ENST00000544738 PSG2P11465 335 aa13.28□□□□□ -0.28
DDX55-212ENST00000544738 EPHA2P29317 976 aa13.28□□□□□ -0.28
DDX55-212ENST00000544738 LOXL3P58215 753 aa13.28□□□□□ -0.28
DDX55-212ENST00000544738 PROK1P58294 105 aa13.28□□□□□ -0.28
DDX55-212ENST00000544738 MFGE8Q08431 387 aaPredicted RBP13.28□□□□□ -0.28
DDX55-212ENST00000544738 CLVS2Q5SYC1 327 aa13.28□□□□□ -0.28
DDX55-212ENST00000544738 BCL2L15Q5TBC7 163 aa13.28□□□□□ -0.28
DDX55-212ENST00000544738 NCR3LG1Q68D85 454 aa13.28□□□□□ -0.28
DDX55-212ENST00000544738 ZNF573Q86YE8 665 aa13.28□□□□□ -0.28
DDX55-212ENST00000544738 Q8N7P7 452 aa13.28□□□□□ -0.28
DDX55-212ENST00000544738 PPP1R14AQ96A00 147 aa13.28□□□□□ -0.28
DDX55-212ENST00000544738 IL4I1Q96RQ9 567 aa13.28□□□□□ -0.28
DDX55-212ENST00000544738 WARS2Q9UGM6 360 aaKnown RBP13.28□□□□□ -0.28
DDX55-212ENST00000544738 OR52A1Q9UKL2 312 aa13.28□□□□□ -0.28
DDX55-212ENST00000544738 SNX5Q9Y5X3 404 aa13.28□□□□□ -0.28
DDX55-212ENST00000544738 TRBV23-1A0A0A0MS06 115 aa13.27□□□□□ -0.29
DDX55-212ENST00000544738 BTBD17A6NE02 478 aa13.27□□□□□ -0.29
DDX55-212ENST00000544738 RNASEK-C17orf49H0YIS7 233 aa13.27□□□□□ -0.29
DDX55-212ENST00000544738 M0R129 80 aa13.27□□□□□ -0.29
DDX55-212ENST00000544738 NPFFO15130 113 aa13.27□□□□□ -0.29
DDX55-212ENST00000544738 IGHV4-59P01825 116 aa13.27□□□□□ -0.29
DDX55-212ENST00000544738 SMIM21Q3B7S5 101 aa13.27□□□□□ -0.29
DDX55-212ENST00000544738 KPRPQ5T749 579 aaPredicted RBP13.27□□□□□ -0.29
DDX55-212ENST00000544738 TMEM42Q69YG0 159 aa13.27□□□□□ -0.29
DDX55-212ENST00000544738 GDPGP1Q6ZNW5 385 aa13.27□□□□□ -0.29
DDX55-212ENST00000544738 AMIGO2Q86SJ2 522 aa13.27□□□□□ -0.29
DDX55-212ENST00000544738 POC1AQ8NBT0 407 aa13.27□□□□□ -0.29
DDX55-212ENST00000544738 ZNRF1Q8ND25 227 aa13.27□□□□□ -0.29
DDX55-212ENST00000544738 TMEM185AQ8NFB2 350 aa13.27□□□□□ -0.29
DDX55-212ENST00000544738 SDSLQ96GA7 329 aa13.27□□□□□ -0.29
DDX55-212ENST00000544738 ZNF222Q9UK12 451 aa13.27□□□□□ -0.29
DDX55-212ENST00000544738 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.27□□□□□ -0.29
DDX55-212ENST00000544738 POLDIP2Q9Y2S7 368 aa13.27□□□□□ -0.29
DDX55-212ENST00000544738 V9GYS6 101 aa13.27□□□□□ -0.29
DDX55-212ENST00000544738 J3QT63 122 aa13.26□□□□□ -0.29
DDX55-212ENST00000544738 GPR137BO60478 399 aa13.26□□□□□ -0.29
DDX55-212ENST00000544738 NOS1APO75052 506 aaPredicted RBP13.26□□□□□ -0.29
DDX55-212ENST00000544738 TFF1P04155 84 aa13.26□□□□□ -0.29
DDX55-212ENST00000544738 KRT8P05787 483 aa13.26□□□□□ -0.29
DDX55-212ENST00000544738 HAAOP46952 286 aa13.26□□□□□ -0.29
DDX55-212ENST00000544738 UBE2E1P51965 193 aa13.26□□□□□ -0.29
DDX55-212ENST00000544738 ACSM1Q08AH1 577 aa13.26□□□□□ -0.29
DDX55-212ENST00000544738 DMRTC1Q5HYR2 192 aa13.26□□□□□ -0.29
DDX55-212ENST00000544738 SAMD5Q5TGI4 173 aa13.26□□□□□ -0.29
DDX55-212ENST00000544738 ACP7Q6ZNF0 438 aa13.26□□□□□ -0.29
DDX55-212ENST00000544738 OR51G2Q8NGK0 314 aa13.26□□□□□ -0.29
DDX55-212ENST00000544738 OR5D13Q8NGL4 314 aa13.26□□□□□ -0.29
DDX55-212ENST00000544738 TNFRSF14Q92956 283 aa13.26□□□□□ -0.29
DDX55-212ENST00000544738 CENPNQ96H22 339 aaPredicted RBP13.26□□□□□ -0.29
DDX55-212ENST00000544738 CIB1Q99828 191 aa13.26□□□□□ -0.29
DDX55-212ENST00000544738 OSBPL10Q9BXB5 764 aa13.26□□□□□ -0.29
DDX55-212ENST00000544738 ZNRD1Q9P1U0 126 aa13.26□□□□□ -0.29
DDX55-212ENST00000544738 MRM2Q9UI43 246 aaKnown RBP13.26□□□□□ -0.29
DDX55-212ENST00000544738 MAB21L2Q9Y586 359 aa13.26□□□□□ -0.29
DDX55-212ENST00000544738 A0A1B0GTI1 187 aa13.25□□□□□ -0.29
DDX55-212ENST00000544738 A0A1W2PPH5 198 aa13.25□□□□□ -0.29
DDX55-212ENST00000544738 SLC1A7O00341 560 aa13.25□□□□□ -0.29
DDX55-212ENST00000544738 MAGEB4O15481 346 aaPredicted RBP13.25□□□□□ -0.29
DDX55-212ENST00000544738 PAHP00439 452 aa13.25□□□□□ -0.29
DDX55-212ENST00000544738 OR2T7P0C7T2 308 aa13.25□□□□□ -0.29
DDX55-212ENST00000544738 CAPZA1P52907 286 aa13.25□□□□□ -0.29
DDX55-212ENST00000544738 Q6ZSR3 168 aa13.25□□□□□ -0.29
DDX55-212ENST00000544738 ZNF561Q8N587 486 aa13.25□□□□□ -0.29
DDX55-212ENST00000544738 YIPF7Q8N8F6 280 aa13.25□□□□□ -0.29
DDX55-212ENST00000544738 OR8J1Q8NGP2 316 aa13.25□□□□□ -0.29
DDX55-212ENST00000544738 OR14K1Q8NGZ2 314 aa13.25□□□□□ -0.29
DDX55-212ENST00000544738 OR2T27Q8NH04 317 aa13.25□□□□□ -0.29
DDX55-212ENST00000544738 PQLC2LA1A4F0 135 aa13.24□□□□□ -0.29
DDX55-212ENST00000544738 RFPL4AA6NLU0 287 aa13.24□□□□□ -0.29
DDX55-212ENST00000544738 RFPL4AL1F8VTS6 287 aa13.24□□□□□ -0.29
DDX55-212ENST00000544738 H0YAE9 185 aa13.24□□□□□ -0.29
DDX55-212ENST00000544738 CIB2O75838 187 aa13.24□□□□□ -0.29
DDX55-212ENST00000544738 SULT1C4O75897 302 aa13.24□□□□□ -0.29
DDX55-212ENST00000544738 PGA5P0DJD9 388 aa13.24□□□□□ -0.29
DDX55-212ENST00000544738 HTR1FP30939 366 aa13.24□□□□□ -0.29
DDX55-212ENST00000544738 SAA4P35542 130 aa13.24□□□□□ -0.29
DDX55-212ENST00000544738 ATP6V1E1P36543 226 aa13.24□□□□□ -0.29
DDX55-212ENST00000544738 TMED1Q13445 227 aa13.24□□□□□ -0.29
DDX55-212ENST00000544738 ASRGL1Q7L266 308 aa13.24□□□□□ -0.29
DDX55-212ENST00000544738 CCDC54Q8NEL0 328 aa13.24□□□□□ -0.29
DDX55-212ENST00000544738 OR5R1Q8NH85 324 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms