RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 ENSAO43768 121 aaKnown RBP9.18□□□□□ -0.94
DDB1-222ENST00000543627 CUBNO60494 3623 aa9.18□□□□□ -0.94
DDB1-222ENST00000543627 FSTL3O95633 263 aa9.18□□□□□ -0.94
DDB1-222ENST00000543627 IGHA1P01876 353 aa9.18□□□□□ -0.94
DDB1-222ENST00000543627 LIMS3P0CW19 117 aa9.18□□□□□ -0.94
DDB1-222ENST00000543627 LIMS4P0CW20 117 aa9.18□□□□□ -0.94
DDB1-222ENST00000543627 CCL1P22362 96 aa9.18□□□□□ -0.94
DDB1-222ENST00000543627 FPR2P25090 351 aa9.18□□□□□ -0.94
DDB1-222ENST00000543627 DCKP27707 260 aa9.18□□□□□ -0.94
DDB1-222ENST00000543627 SOX2P48431 317 aa9.18□□□□□ -0.94
DDB1-222ENST00000543627 CEBPDP49716 269 aaPredicted RBP9.18□□□□□ -0.94
DDB1-222ENST00000543627 FUT6P51993 359 aa9.18□□□□□ -0.94
DDB1-222ENST00000543627 AQP4P55087 323 aa9.18□□□□□ -0.94
DDB1-222ENST00000543627 SNU13P55769 128 aaKnown RBP9.18□□□□□ -0.94
DDB1-222ENST00000543627 MTCP1P56278 107 aa9.18□□□□□ -0.94
DDB1-222ENST00000543627 FGF12P61328 243 aa9.18□□□□□ -0.94
DDB1-222ENST00000543627 ARF6P62330 175 aa9.18□□□□□ -0.94
DDB1-222ENST00000543627 SCGB2A2Q13296 93 aa9.18□□□□□ -0.94
DDB1-222ENST00000543627 IL18R1Q13478 541 aa9.18□□□□□ -0.94
DDB1-222ENST00000543627 CNN3Q15417 329 aaKnown RBP9.18□□□□□ -0.94
DDB1-222ENST00000543627 LRRC10Q5BKY1 277 aa9.18□□□□□ -0.94
DDB1-222ENST00000543627 C1QL2Q7Z5L3 287 aa9.18□□□□□ -0.94
DDB1-222ENST00000543627 CALHM1Q8IU99 346 aa9.18□□□□□ -0.94
DDB1-222ENST00000543627 PDZD9Q8IXQ8 264 aa9.18□□□□□ -0.94
DDB1-222ENST00000543627 SYS1Q8N2H4 156 aa9.18□□□□□ -0.94
DDB1-222ENST00000543627 CCDC54Q8NEL0 328 aa9.18□□□□□ -0.94
DDB1-222ENST00000543627 TMEM185AQ8NFB2 350 aa9.18□□□□□ -0.94
DDB1-222ENST00000543627 ZNF418Q8TF45 676 aaPredicted RBP9.18□□□□□ -0.94
DDB1-222ENST00000543627 NRG4Q8WWG1 115 aa9.18□□□□□ -0.94
DDB1-222ENST00000543627 ITFG2Q969R8 447 aa9.18□□□□□ -0.94
DDB1-222ENST00000543627 RNF166Q96A37 237 aaPredicted RBP9.18□□□□□ -0.94
DDB1-222ENST00000543627 SPACA5Q96QH8 159 aa9.18□□□□□ -0.94
DDB1-222ENST00000543627 SLC6A7Q99884 636 aa9.18□□□□□ -0.94
DDB1-222ENST00000543627 MS4A7Q9GZW8 240 aaPredicted RBP9.18□□□□□ -0.94
DDB1-222ENST00000543627 NEK6Q9HC98 313 aa9.18□□□□□ -0.94
DDB1-222ENST00000543627 FGF20Q9NP95 211 aaPredicted RBP9.18□□□□□ -0.94
DDB1-222ENST00000543627 MRPS18AQ9NVS2 196 aaKnown RBP9.18□□□□□ -0.94
DDB1-222ENST00000543627 ONECUT1Q9UBC0 465 aa9.18□□□□□ -0.94
DDB1-222ENST00000543627 CLEC2DQ9UHP7 191 aa9.18□□□□□ -0.94
DDB1-222ENST00000543627 DHDHQ9UQ10 334 aa9.18□□□□□ -0.94
DDB1-222ENST00000543627 POLDIP2Q9Y2S7 368 aa9.18□□□□□ -0.94
DDB1-222ENST00000543627 EXOSC1Q9Y3B2 195 aaKnown RBP9.18□□□□□ -0.94
DDB1-222ENST00000543627 PPIAL4CA0A0B4J2A2 164 aa9.17□□□□□ -0.94
DDB1-222ENST00000543627 KIR2DS1A0A191URI9 304 aa9.17□□□□□ -0.94
DDB1-222ENST00000543627 A0A1W2PQ09 198 aa9.17□□□□□ -0.94
DDB1-222ENST00000543627 RFPL4AA6NLU0 287 aa9.17□□□□□ -0.94
DDB1-222ENST00000543627 OR4C45A6NMZ5 311 aa9.17□□□□□ -0.94
DDB1-222ENST00000543627 DHRS7CA6NNS2 312 aa9.17□□□□□ -0.94
DDB1-222ENST00000543627 PTGES3LE9PB15 166 aa9.17□□□□□ -0.94
DDB1-222ENST00000543627 RFPL4AL1F8VTS6 287 aa9.17□□□□□ -0.94
DDB1-222ENST00000543627 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.17□□□□□ -0.94
DDB1-222ENST00000543627 TNFRSF13BO14836 293 aaPredicted RBP9.17□□□□□ -0.94
DDB1-222ENST00000543627 TOX4O94842 621 aa9.17□□□□□ -0.94
DDB1-222ENST00000543627 CYB5AP00167 134 aa9.17□□□□□ -0.94
DDB1-222ENST00000543627 HCKP08631 526 aa9.17□□□□□ -0.94
DDB1-222ENST00000543627 RPSAP08865 295 aaKnown RBP9.17□□□□□ -0.94
DDB1-222ENST00000543627 CCDC159P0C7I6 412 aa9.17□□□□□ -0.94
DDB1-222ENST00000543627 PSG2P11465 335 aa9.17□□□□□ -0.94
DDB1-222ENST00000543627 ATF1P18846 271 aa9.17□□□□□ -0.94
DDB1-222ENST00000543627 CPT2P23786 658 aa9.17□□□□□ -0.94
DDB1-222ENST00000543627 AZGP1P25311 298 aaKnown RBP9.17□□□□□ -0.94
DDB1-222ENST00000543627 CFHR2P36980 270 aa9.17□□□□□ -0.94
DDB1-222ENST00000543627 CCR9P51686 369 aa9.17□□□□□ -0.94
DDB1-222ENST00000543627 ATP1B3P54709 279 aa9.17□□□□□ -0.94
DDB1-222ENST00000543627 IL13RA1P78552 427 aa9.17□□□□□ -0.94
DDB1-222ENST00000543627 PAX8Q06710 450 aa9.17□□□□□ -0.94
DDB1-222ENST00000543627 ST3GAL4Q11206 333 aa9.17□□□□□ -0.94
DDB1-222ENST00000543627 METTL11BQ5VVY1 283 aa9.17□□□□□ -0.94
DDB1-222ENST00000543627 TMEM42Q69YG0 159 aa9.17□□□□□ -0.94
DDB1-222ENST00000543627 STUMQ69YW2 141 aa9.17□□□□□ -0.94
DDB1-222ENST00000543627 ACP7Q6ZNF0 438 aa9.17□□□□□ -0.94
DDB1-222ENST00000543627 SLC25A26Q70HW3 274 aa9.17□□□□□ -0.94
DDB1-222ENST00000543627 AHSA2Q719I0 299 aa9.17□□□□□ -0.94
DDB1-222ENST00000543627 SATL1Q86VE3 508 aa9.17□□□□□ -0.94
DDB1-222ENST00000543627 ZFP41Q8N8Y5 198 aa9.17□□□□□ -0.94
DDB1-222ENST00000543627 PNLDC1Q8NA58 520 aaKnown RBP9.17□□□□□ -0.94
DDB1-222ENST00000543627 ZNRF1Q8ND25 227 aa9.17□□□□□ -0.94
DDB1-222ENST00000543627 OR13C9Q8NGT0 318 aa9.17□□□□□ -0.94
DDB1-222ENST00000543627 MED30Q96HR3 178 aa9.17□□□□□ -0.94
DDB1-222ENST00000543627 CHST5Q9GZS9 411 aa9.17□□□□□ -0.94
DDB1-222ENST00000543627 ELL3Q9HB65 397 aaPredicted RBP9.17□□□□□ -0.94
DDB1-222ENST00000543627 SLC25A10Q9UBX3 287 aaPredicted RBP9.17□□□□□ -0.94
DDB1-222ENST00000543627 NUP50Q9UKX7 468 aa9.17□□□□□ -0.94
DDB1-222ENST00000543627 CAB39Q9Y376 341 aaPredicted RBP9.17□□□□□ -0.94
DDB1-222ENST00000543627 DOCK11Q5JSL3 2073 aa9.17□□□□□ -0.94
DDB1-222ENST00000543627 IGKV1-27A0A075B6S5 117 aa9.16□□□□□ -0.94
DDB1-222ENST00000543627 TRAV40A0A0B4J280 105 aa9.16□□□□□ -0.94
DDB1-222ENST00000543627 EFCAB10A6NFE3 127 aa9.16□□□□□ -0.94
DDB1-222ENST00000543627 TMEM212A6NML5 194 aa9.16□□□□□ -0.94
DDB1-222ENST00000543627 SPRY1O43609 319 aaPredicted RBP9.16□□□□□ -0.94
DDB1-222ENST00000543627 ZFPL1O95159 310 aa9.16□□□□□ -0.94
DDB1-222ENST00000543627 ISG15P05161 165 aa9.16□□□□□ -0.94
DDB1-222ENST00000543627 SFTPBP07988 381 aa9.16□□□□□ -0.94
DDB1-222ENST00000543627 PPIAL4GP0DN37 164 aa9.16□□□□□ -0.94
DDB1-222ENST00000543627 IGHV4-38-2P0DP08 117 aa9.16□□□□□ -0.94
DDB1-222ENST00000543627 AMY2BP19961 511 aa9.16□□□□□ -0.94
DDB1-222ENST00000543627 PRKACBP22694 351 aa9.16□□□□□ -0.94
DDB1-222ENST00000543627 PRDX2P32119 198 aa9.16□□□□□ -0.94
DDB1-222ENST00000543627 RBP2P50120 134 aa9.16□□□□□ -0.94
DDB1-222ENST00000543627 PRB3Q04118 309 aaPredicted RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms