RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 WDR82Q6UXN9 313 aa11.56□□□□□ -0.56
CD44-224ENST00000526669 ZNF573Q86YE8 665 aa11.56□□□□□ -0.56
CD44-224ENST00000526669 OR11L1Q8NGX0 322 aa11.56□□□□□ -0.56
CD44-224ENST00000526669 AQP3Q92482 292 aa11.56□□□□□ -0.56
CD44-224ENST00000526669 PHYHIPQ92561 330 aa11.56□□□□□ -0.56
CD44-224ENST00000526669 SLAMF9Q96A28 289 aa11.56□□□□□ -0.56
CD44-224ENST00000526669 MBD6Q96DN6 1003 aa11.56□□□□□ -0.56
CD44-224ENST00000526669 KCTD7Q96MP8 289 aa11.56□□□□□ -0.56
CD44-224ENST00000526669 TLNRD1Q9H1K6 362 aa11.56□□□□□ -0.56
CD44-224ENST00000526669 BARX1Q9HBU1 254 aaPredicted RBP11.56□□□□□ -0.56
CD44-224ENST00000526669 TMEM106BQ9NUM4 274 aa11.56□□□□□ -0.56
CD44-224ENST00000526669 RNF7Q9UBF6 113 aa11.56□□□□□ -0.56
CD44-224ENST00000526669 ITPR3Q14573 2671 aa11.55□□□□□ -0.56
CD44-224ENST00000526669 WNT9BO14905 357 aa11.55□□□□□ -0.56
CD44-224ENST00000526669 PPIHO43447 177 aaKnown RBP11.55□□□□□ -0.56
CD44-224ENST00000526669 CDRT1O95170 752 aa11.55□□□□□ -0.56
CD44-224ENST00000526669 ALDOBP05062 364 aa11.55□□□□□ -0.56
CD44-224ENST00000526669 CALCBP10092 127 aa11.55□□□□□ -0.56
CD44-224ENST00000526669 IRF2P14316 349 aa11.55□□□□□ -0.56
CD44-224ENST00000526669 GALP22466 123 aa11.55□□□□□ -0.56
CD44-224ENST00000526669 SDC2P34741 201 aa11.55□□□□□ -0.56
CD44-224ENST00000526669 ZNF93P35789 620 aaPredicted RBP11.55□□□□□ -0.56
CD44-224ENST00000526669 PDLIM4P50479 330 aa11.55□□□□□ -0.56
CD44-224ENST00000526669 CAV3P56539 151 aa11.55□□□□□ -0.56
CD44-224ENST00000526669 OR10A3P58181 314 aa11.55□□□□□ -0.56
CD44-224ENST00000526669 ZP1P60852 638 aa11.55□□□□□ -0.56
CD44-224ENST00000526669 VBP1P61758 197 aa11.55□□□□□ -0.56
CD44-224ENST00000526669 FAM76BQ5HYJ3 339 aa11.55□□□□□ -0.56
CD44-224ENST00000526669 Q5PR19 223 aa11.55□□□□□ -0.56
CD44-224ENST00000526669 SLC25A26Q70HW3 274 aa11.55□□□□□ -0.56
CD44-224ENST00000526669 ANKRD13BQ86YJ7 626 aa11.55□□□□□ -0.56
CD44-224ENST00000526669 Q8TCH9 128 aa11.55□□□□□ -0.56
CD44-224ENST00000526669 TNFAIP8L1Q8WVP5 186 aa11.55□□□□□ -0.56
CD44-224ENST00000526669 SEH1LQ96EE3 360 aa11.55□□□□□ -0.56
CD44-224ENST00000526669 SNTG1Q9NSN8 517 aa11.55□□□□□ -0.56
CD44-224ENST00000526669 IGHV3OR15-7A0A075B7D8 119 aa11.54□□□□□ -0.56
CD44-224ENST00000526669 TRAV1-2A0A0B4J238 106 aa11.54□□□□□ -0.56
CD44-224ENST00000526669 IGKV1-12A0A0C4DH73 117 aa11.54□□□□□ -0.56
CD44-224ENST00000526669 TRIM64BA6NI03 449 aa11.54□□□□□ -0.56
CD44-224ENST00000526669 CLDN25C9JDP6 229 aa11.54□□□□□ -0.56
CD44-224ENST00000526669 TMEM178BH3BS89 294 aa11.54□□□□□ -0.56
CD44-224ENST00000526669 IGKV1D-12P01611 117 aa11.54□□□□□ -0.56
CD44-224ENST00000526669 TMEM225BP0DP42 221 aa11.54□□□□□ -0.56
CD44-224ENST00000526669 BCL3P20749 454 aa11.54□□□□□ -0.56
CD44-224ENST00000526669 SERPINB10P48595 397 aa11.54□□□□□ -0.56
CD44-224ENST00000526669 ART1P52961 327 aa11.54□□□□□ -0.56
CD44-224ENST00000526669 PDZK1IP1Q13113 114 aa11.54□□□□□ -0.56
CD44-224ENST00000526669 BLMHQ13867 455 aa11.54□□□□□ -0.56
CD44-224ENST00000526669 CLEC12BQ2HXU8 276 aa11.54□□□□□ -0.56
CD44-224ENST00000526669 HES5Q5TA89 166 aa11.54□□□□□ -0.56
CD44-224ENST00000526669 GLT8D1Q68CQ7 371 aa11.54□□□□□ -0.56
CD44-224ENST00000526669 SFRP4Q6FHJ7 346 aaPredicted RBP11.54□□□□□ -0.56
CD44-224ENST00000526669 CLEC2AQ6UVW9 174 aa11.54□□□□□ -0.56
CD44-224ENST00000526669 C1QL2Q7Z5L3 287 aa11.54□□□□□ -0.56
CD44-224ENST00000526669 LRRC75A-AS1Q8N1F1 130 aa11.54□□□□□ -0.56
CD44-224ENST00000526669 GCSAMQ8N6F7 178 aa11.54□□□□□ -0.56
CD44-224ENST00000526669 OR10K1Q8NGX5 313 aa11.54□□□□□ -0.56
CD44-224ENST00000526669 ERGIC1Q969X5 290 aa11.54□□□□□ -0.56
CD44-224ENST00000526669 PKIBQ9C010 78 aa11.54□□□□□ -0.56
CD44-224ENST00000526669 WDR13Q9H1Z4 485 aa11.54□□□□□ -0.56
CD44-224ENST00000526669 KCNK15Q9H427 330 aa11.54□□□□□ -0.56
CD44-224ENST00000526669 NARFLQ9H6Q4 476 aa11.54□□□□□ -0.56
CD44-224ENST00000526669 CNTD2Q9H8S5 307 aa11.54□□□□□ -0.56
CD44-224ENST00000526669 CHODLQ9H9P2 273 aa11.54□□□□□ -0.56
CD44-224ENST00000526669 ELL3Q9HB65 397 aaPredicted RBP11.54□□□□□ -0.56
CD44-224ENST00000526669 DLL4Q9NR61 685 aa11.54□□□□□ -0.56
CD44-224ENST00000526669 ING4Q9UNL4 249 aa11.54□□□□□ -0.56
CD44-224ENST00000526669 MALRD1Q5VYJ5 2156 aa11.53□□□□□ -0.56
CD44-224ENST00000526669 IGHV4-30-2A0A087WSY4 118 aa11.53□□□□□ -0.56
CD44-224ENST00000526669 ISPDA4D126 451 aa11.53□□□□□ -0.56
CD44-224ENST00000526669 MEGF11A6BM72 1044 aa11.53□□□□□ -0.56
CD44-224ENST00000526669 CCDC160A6NGH7 325 aa11.53□□□□□ -0.56
CD44-224ENST00000526669 LRRC30A6NM36 301 aa11.53□□□□□ -0.56
CD44-224ENST00000526669 F8VVB4 439 aa11.53□□□□□ -0.56
CD44-224ENST00000526669 F8VWA3 439 aa11.53□□□□□ -0.56
CD44-224ENST00000526669 PDCD5O14737 125 aa11.53□□□□□ -0.56
CD44-224ENST00000526669 GABARAPO95166 117 aa11.53□□□□□ -0.56
CD44-224ENST00000526669 TFF1P04155 84 aa11.53□□□□□ -0.56
CD44-224ENST00000526669 RAB3BP20337 219 aa11.53□□□□□ -0.56
CD44-224ENST00000526669 GLRA1P23415 457 aa11.53□□□□□ -0.56
CD44-224ENST00000526669 MPZP25189 248 aa11.53□□□□□ -0.56
CD44-224ENST00000526669 GPR6P46095 362 aaPredicted RBP11.53□□□□□ -0.56
CD44-224ENST00000526669 NPBWR2P48146 333 aa11.53□□□□□ -0.56
CD44-224ENST00000526669 MTNR1BP49286 362 aa11.53□□□□□ -0.56
CD44-224ENST00000526669 SNU13P55769 128 aaKnown RBP11.53□□□□□ -0.56
CD44-224ENST00000526669 IL24Q13007 206 aa11.53□□□□□ -0.56
CD44-224ENST00000526669 P2RY14Q15391 338 aa11.53□□□□□ -0.56
CD44-224ENST00000526669 AWAT2Q6E213 333 aa11.53□□□□□ -0.56
CD44-224ENST00000526669 GDPGP1Q6ZNW5 385 aa11.53□□□□□ -0.56
CD44-224ENST00000526669 NR2C2APQ86WQ0 139 aa11.53□□□□□ -0.56
CD44-224ENST00000526669 KRTAP1-3Q8IUG1 177 aa11.53□□□□□ -0.56
CD44-224ENST00000526669 NKAIN3Q8N8D7 197 aa11.53□□□□□ -0.56
CD44-224ENST00000526669 PNLDC1Q8NA58 520 aaKnown RBP11.53□□□□□ -0.56
CD44-224ENST00000526669 DEFB108BQ8NET1 73 aa11.53□□□□□ -0.56
CD44-224ENST00000526669 OR4D6Q8NGJ1 314 aa11.53□□□□□ -0.56
CD44-224ENST00000526669 OR10Z1Q8NGY1 313 aa11.53□□□□□ -0.56
CD44-224ENST00000526669 OR51F2Q8NH61 342 aa11.53□□□□□ -0.56
CD44-224ENST00000526669 ZNF671Q8TAW3 534 aa11.53□□□□□ -0.56
CD44-224ENST00000526669 FAM168AQ92567 244 aa11.53□□□□□ -0.56
CD44-224ENST00000526669 HPS1Q92902 700 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 126 ms