RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 ZNF574Q6ZN55 896 aaPredicted RBP14.72□□□□□ -0.05
PCDHA1-203ENST00000504120 OR6X1Q8NH79 312 aa14.72□□□□□ -0.05
PCDHA1-203ENST00000504120 ARFGEF1Q9Y6D6 1849 aa14.72□□□□□ -0.05
PCDHA1-203ENST00000504120 UBE2L5PA0A1B0GUS4 154 aa14.72□□□□□ -0.05
PCDHA1-203ENST00000504120 NPIPB8E9PQR5 432 aa14.72□□□□□ -0.05
PCDHA1-203ENST00000504120 MBTPS2O43462 519 aa14.72□□□□□ -0.05
PCDHA1-203ENST00000504120 FBP1P09467 338 aa14.72□□□□□ -0.05
PCDHA1-203ENST00000504120 MICBQ29980 383 aa14.72□□□□□ -0.05
PCDHA1-203ENST00000504120 DMKNQ6E0U4 476 aaPredicted RBP14.72□□□□□ -0.05
PCDHA1-203ENST00000504120 MUC20Q8N307 709 aaPredicted RBP14.72□□□□□ -0.05
PCDHA1-203ENST00000504120 OR13G1Q8NGZ3 307 aa14.72□□□□□ -0.05
PCDHA1-203ENST00000504120 GAR1Q9NY12 217 aaKnown RBP14.72□□□□□ -0.05
PCDHA1-203ENST00000504120 K7EQS6 105 aa14.72□□□□□ -0.05
PCDHA1-203ENST00000504120 S100A8P05109 93 aa14.72□□□□□ -0.05
PCDHA1-203ENST00000504120 LIMK1P53667 647 aa14.72□□□□□ -0.05
PCDHA1-203ENST00000504120 PPP1R1AQ13522 171 aa14.72□□□□□ -0.05
PCDHA1-203ENST00000504120 MRGPREQ86SM8 312 aa14.72□□□□□ -0.05
PCDHA1-203ENST00000504120 TGIF2Q9GZN2 237 aa14.72□□□□□ -0.05
PCDHA1-203ENST00000504120 ZNF586Q9NXT0 402 aa14.72□□□□□ -0.05
PCDHA1-203ENST00000504120 RNASEK-C17orf49H0YIS7 233 aa14.71□□□□□ -0.05
PCDHA1-203ENST00000504120 MASP2O00187 686 aa14.71□□□□□ -0.05
PCDHA1-203ENST00000504120 PDCD6O75340 191 aa14.71□□□□□ -0.05
PCDHA1-203ENST00000504120 NUFIP2Q7Z417 695 aaKnown RBP14.71□□□□□ -0.05
PCDHA1-203ENST00000504120 RAB40CQ96S21 281 aa14.71□□□□□ -0.05
PCDHA1-203ENST00000504120 ZNF230Q9UIE0 474 aaPredicted RBP14.71□□□□□ -0.05
PCDHA1-203ENST00000504120 RNF24Q9Y225 148 aa14.71□□□□□ -0.05
PCDHA1-203ENST00000504120 FAM96BQ9Y3D0 163 aa14.71□□□□□ -0.05
PCDHA1-203ENST00000504120 KRASP01116 189 aa14.71□□□□□ -0.05
PCDHA1-203ENST00000504120 PPP1CAP62136 330 aa14.71□□□□□ -0.05
PCDHA1-203ENST00000504120 DHRS13Q6UX07 377 aa14.71□□□□□ -0.05
PCDHA1-203ENST00000504120 M1APQ8TC57 530 aa14.71□□□□□ -0.05
PCDHA1-203ENST00000504120 CMBLQ96DG6 245 aa14.71□□□□□ -0.05
PCDHA1-203ENST00000504120 LURAP1Q96LR2 239 aa14.71□□□□□ -0.05
PCDHA1-203ENST00000504120 BARX1Q9HBU1 254 aaPredicted RBP14.71□□□□□ -0.05
PCDHA1-203ENST00000504120 MCM3APO60318 1980 aa14.71□□□□□ -0.05
PCDHA1-203ENST00000504120 SEMG1P04279 462 aa14.71□□□□□ -0.05
PCDHA1-203ENST00000504120 CA6P23280 308 aa14.71□□□□□ -0.05
PCDHA1-203ENST00000504120 CEACAM6P40199 344 aa14.71□□□□□ -0.05
PCDHA1-203ENST00000504120 CNN1P51911 297 aaKnown RBP14.71□□□□□ -0.05
PCDHA1-203ENST00000504120 KHDC1LQ5JSQ8 128 aa14.71□□□□□ -0.05
PCDHA1-203ENST00000504120 VASH2Q86V25 355 aa14.71□□□□□ -0.05
PCDHA1-203ENST00000504120 SIGLECL1Q8N7X8 197 aa14.71□□□□□ -0.05
PCDHA1-203ENST00000504120 MARVELD1Q9BSK0 173 aa14.71□□□□□ -0.05
PCDHA1-203ENST00000504120 FAAP24Q9BTP7 215 aa14.71□□□□□ -0.05
PCDHA1-203ENST00000504120 MYOZ1Q9NP98 299 aaPredicted RBP14.71□□□□□ -0.05
PCDHA1-203ENST00000504120 ZNF835Q9Y2P0 537 aa14.71□□□□□ -0.05
PCDHA1-203ENST00000504120 C9orf170A2RU37 121 aa14.71□□□□□ -0.06
PCDHA1-203ENST00000504120 CPN1P15169 458 aa14.71□□□□□ -0.06
PCDHA1-203ENST00000504120 RASL12Q9NYN1 266 aa14.71□□□□□ -0.06
PCDHA1-203ENST00000504120 CCL27Q9Y4X3 112 aa14.71□□□□□ -0.06
PCDHA1-203ENST00000504120 TIMM9Q9Y5J7 89 aa14.71□□□□□ -0.06
PCDHA1-203ENST00000504120 FER1L6Q2WGJ9 1857 aa14.71□□□□□ -0.06
PCDHA1-203ENST00000504120 SCN1AP35498 2009 aa14.7□□□□□ -0.06
PCDHA1-203ENST00000504120 A0A1B0GTH9 108 aa14.7□□□□□ -0.06
PCDHA1-203ENST00000504120 H3BMH7 237 aa14.7□□□□□ -0.06
PCDHA1-203ENST00000504120 HRASP01112 189 aa14.7□□□□□ -0.06
PCDHA1-203ENST00000504120 FABP9Q0Z7S8 132 aa14.7□□□□□ -0.06
PCDHA1-203ENST00000504120 PWWP2BQ6NUJ5 590 aa14.7□□□□□ -0.06
PCDHA1-203ENST00000504120 CNTD2Q9H8S5 307 aa14.7□□□□□ -0.06
PCDHA1-203ENST00000504120 UQCC1Q9NVA1 299 aa14.7□□□□□ -0.06
PCDHA1-203ENST00000504120 ERRFI1Q9UJM3 462 aaPredicted RBP14.7□□□□□ -0.06
PCDHA1-203ENST00000504120 TRBV5-3A0A0A0MS03 114 aa14.7□□□□□ -0.06
PCDHA1-203ENST00000504120 SEC14L6B5MCN3 397 aa14.7□□□□□ -0.06
PCDHA1-203ENST00000504120 SPP1P10451 314 aa14.7□□□□□ -0.06
PCDHA1-203ENST00000504120 OR3A4PP47883 348 aa14.7□□□□□ -0.06
PCDHA1-203ENST00000504120 C8orf82Q6P1X6 216 aaPredicted RBP14.7□□□□□ -0.06
PCDHA1-203ENST00000504120 ASB10Q8WXI3 467 aa14.7□□□□□ -0.06
PCDHA1-203ENST00000504120 FBXO17Q96EF6 278 aa14.7□□□□□ -0.06
PCDHA1-203ENST00000504120 VSTM2LQ96N03 204 aa14.7□□□□□ -0.06
PCDHA1-203ENST00000504120 SMCHD1A6NHR9 2005 aa14.7□□□□□ -0.06
PCDHA1-203ENST00000504120 ANKRD20A5PA0PJZ0 165 aa14.7□□□□□ -0.06
PCDHA1-203ENST00000504120 NTF3P20783 257 aa14.7□□□□□ -0.06
PCDHA1-203ENST00000504120 C6orf201Q7Z4U5 140 aa14.7□□□□□ -0.06
PCDHA1-203ENST00000504120 LSMEM1Q8N8F7 131 aa14.7□□□□□ -0.06
PCDHA1-203ENST00000504120 TMEM56Q96MV1 263 aa14.7□□□□□ -0.06
PCDHA1-203ENST00000504120 OGG1O15527 345 aa14.7□□□□□ -0.06
PCDHA1-203ENST00000504120 OR10V1Q8NGI7 309 aa14.7□□□□□ -0.06
PCDHA1-203ENST00000504120 MRM2Q9UI43 246 aaKnown RBP14.7□□□□□ -0.06
PCDHA1-203ENST00000504120 KLK10O43240 276 aa14.69□□□□□ -0.06
PCDHA1-203ENST00000504120 ZNF17P17021 662 aa14.69□□□□□ -0.06
PCDHA1-203ENST00000504120 ZP3P21754 424 aa14.69□□□□□ -0.06
PCDHA1-203ENST00000504120 ATG4DQ86TL0 474 aaPredicted RBP14.69□□□□□ -0.06
PCDHA1-203ENST00000504120 CXorf67Q86X51 503 aaPredicted RBP14.69□□□□□ -0.06
PCDHA1-203ENST00000504120 TMEM18Q96B42 140 aa14.69□□□□□ -0.06
PCDHA1-203ENST00000504120 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.69□□□□□ -0.06
PCDHA1-203ENST00000504120 C3orf85A0A1B0GTC6 90 aa14.69□□□□□ -0.06
PCDHA1-203ENST00000504120 SERTM2A0A1B0GWG4 89 aa14.69□□□□□ -0.06
PCDHA1-203ENST00000504120 A0A1W2PPQ1 181 aa14.69□□□□□ -0.06
PCDHA1-203ENST00000504120 DUS4LO95620 317 aaKnown RBP14.69□□□□□ -0.06
PCDHA1-203ENST00000504120 SFTA3P0C7M3 94 aa14.69□□□□□ -0.06
PCDHA1-203ENST00000504120 ACSM4P0C7M7 580 aa14.69□□□□□ -0.06
PCDHA1-203ENST00000504120 PDCD1Q15116 288 aa14.69□□□□□ -0.06
PCDHA1-203ENST00000504120 AKR1E2Q96JD6 320 aa14.69□□□□□ -0.06
PCDHA1-203ENST00000504120 NAA60Q9H7X0 242 aa14.69□□□□□ -0.06
PCDHA1-203ENST00000504120 MMP26Q9NRE1 261 aa14.69□□□□□ -0.06
PCDHA1-203ENST00000504120 MVDP53602 400 aa14.69□□□□□ -0.06
PCDHA1-203ENST00000504120 SLC37A1P57057 533 aa14.69□□□□□ -0.06
PCDHA1-203ENST00000504120 PSG6Q00889 435 aa14.69□□□□□ -0.06
PCDHA1-203ENST00000504120 C20orf196Q8IYI0 205 aa14.69□□□□□ -0.06
PCDHA1-203ENST00000504120 ACY3Q96HD9 319 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms