RNA–Protein interactions for RNA: ENST00000495485.1

HDAC3-214, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 797 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-214ENST00000495485 RHOFQ9HBH0 211 aa8.85□□□□□ -0.99
HDAC3-214ENST00000495485 GPN1Q9HCN4 374 aaPredicted RBP8.85□□□□□ -0.99
HDAC3-214ENST00000495485 KCNJ16Q9NPI9 418 aa8.85□□□□□ -0.99
HDAC3-214ENST00000495485 MCUBQ9NWR8 336 aa8.85□□□□□ -0.99
HDAC3-214ENST00000495485 ETAA1Q9NY74 926 aa8.85□□□□□ -0.99
HDAC3-214ENST00000495485 NKIRAS2Q9NYR9 191 aa8.85□□□□□ -0.99
HDAC3-214ENST00000495485 IL36GQ9NZH8 169 aa8.85□□□□□ -0.99
HDAC3-214ENST00000495485 KLK11Q9UBX7 282 aa8.85□□□□□ -0.99
HDAC3-214ENST00000495485 SH3BGRL2Q9UJC5 107 aa8.85□□□□□ -0.99
HDAC3-214ENST00000495485 SCP2D1Q9UJQ7 156 aa8.85□□□□□ -0.99
HDAC3-214ENST00000495485 STARD10Q9Y365 291 aa8.85□□□□□ -0.99
HDAC3-214ENST00000495485 RHBDD3Q9Y3P4 386 aa8.85□□□□□ -0.99
HDAC3-214ENST00000495485 TACC2O95359 2948 aa8.85□□□□□ -0.99
HDAC3-214ENST00000495485 CELSR2Q9HCU4 2923 aa8.85□□□□□ -0.99
HDAC3-214ENST00000495485 ITPR2Q14571 2701 aa8.85□□□□□ -0.99
HDAC3-214ENST00000495485 NOTCH2Q04721 2471 aa8.85□□□□□ -0.99
HDAC3-214ENST00000495485 OR5B21A6NL26 309 aa8.84□□□□□ -0.99
HDAC3-214ENST00000495485 ZNF850A8MQ14 1090 aa8.84□□□□□ -0.99
HDAC3-214ENST00000495485 ZNF736B4DX44 427 aaPredicted RBP8.84□□□□□ -0.99
HDAC3-214ENST00000495485 RAB27BO00194 218 aa8.84□□□□□ -0.99
HDAC3-214ENST00000495485 MSTNO14793 375 aa8.84□□□□□ -0.99
HDAC3-214ENST00000495485 AKR7A2O43488 359 aa8.84□□□□□ -0.99
HDAC3-214ENST00000495485 ZG16O60844 167 aa8.84□□□□□ -0.99
HDAC3-214ENST00000495485 CA11O75493 328 aa8.84□□□□□ -0.99
HDAC3-214ENST00000495485 CCNKO75909 580 aa8.84□□□□□ -0.99
HDAC3-214ENST00000495485 GOSR1O95249 250 aa8.84□□□□□ -0.99
HDAC3-214ENST00000495485 HTR3BO95264 441 aa8.84□□□□□ -0.99
HDAC3-214ENST00000495485 CGAP01215 116 aa8.84□□□□□ -0.99
HDAC3-214ENST00000495485 MT-ND4P03905 459 aa8.84□□□□□ -0.99
HDAC3-214ENST00000495485 H2AFB2P0C5Z0 115 aa8.84□□□□□ -0.99
HDAC3-214ENST00000495485 FAM157BP0CG42 384 aa8.84□□□□□ -0.99
HDAC3-214ENST00000495485 RAC2P15153 192 aa8.84□□□□□ -0.99
HDAC3-214ENST00000495485 SERPINA2P20848 420 aa8.84□□□□□ -0.99
HDAC3-214ENST00000495485 ASCL1P50553 236 aa8.84□□□□□ -0.99
HDAC3-214ENST00000495485 PRDX4Q13162 271 aa8.84□□□□□ -0.99
HDAC3-214ENST00000495485 UNC119Q13432 240 aa8.84□□□□□ -0.99
HDAC3-214ENST00000495485 ARFRP1Q13795 201 aa8.84□□□□□ -0.99
HDAC3-214ENST00000495485 RBMS2Q15434 407 aaKnown RBP8.84□□□□□ -0.99
HDAC3-214ENST00000495485 TATDN3Q17R31 274 aa8.84□□□□□ -0.99
HDAC3-214ENST00000495485 C11orf91Q3C1V1 193 aa8.84□□□□□ -0.99
HDAC3-214ENST00000495485 TIMM23BQ5SRD1 257 aa8.84□□□□□ -0.99
HDAC3-214ENST00000495485 STEAP1BQ6NZ63 245 aa8.84□□□□□ -0.99
HDAC3-214ENST00000495485 FBXW12Q6X9E4 464 aa8.84□□□□□ -0.99
HDAC3-214ENST00000495485 CXorf67Q86X51 503 aaPredicted RBP8.84□□□□□ -0.99
HDAC3-214ENST00000495485 ZNF573Q86YE8 665 aa8.84□□□□□ -0.99
HDAC3-214ENST00000495485 ZNF610Q8N9Z0 462 aa8.84□□□□□ -0.99
HDAC3-214ENST00000495485 OR56B2PQ8NGI1 322 aa8.84□□□□□ -0.99
HDAC3-214ENST00000495485 UBASH3BQ8TF42 649 aa8.84□□□□□ -0.99
HDAC3-214ENST00000495485 AQP3Q92482 292 aa8.84□□□□□ -0.99
HDAC3-214ENST00000495485 HPS1Q92902 700 aa8.84□□□□□ -0.99
HDAC3-214ENST00000495485 SEH1LQ96EE3 360 aa8.84□□□□□ -0.99
HDAC3-214ENST00000495485 TM2D1Q9BX74 207 aa8.84□□□□□ -0.99
HDAC3-214ENST00000495485 SELENOIQ9C0D9 397 aa8.84□□□□□ -0.99
HDAC3-214ENST00000495485 LPAR5Q9H1C0 372 aa8.84□□□□□ -0.99
HDAC3-214ENST00000495485 PLK3Q9H4B4 646 aa8.84□□□□□ -0.99
HDAC3-214ENST00000495485 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.84□□□□□ -0.99
HDAC3-214ENST00000495485 ING3Q9NXR8 418 aa8.84□□□□□ -0.99
HDAC3-214ENST00000495485 MYEF2Q9P2K5 600 aaKnown RBP8.84□□□□□ -0.99
HDAC3-214ENST00000495485 SETXQ7Z333 2677 aaKnown RBP8.84□□□□□ -0.99
HDAC3-214ENST00000495485 DCHS2Q6V1P9 2916 aa8.84□□□□□ -0.99
HDAC3-214ENST00000495485 ABCA12Q86UK0 2595 aa8.83□□□□□ -1
HDAC3-214ENST00000495485 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.83□□□□□ -1
HDAC3-214ENST00000495485 A0A0G2JNJ9 132 aa8.83□□□□□ -1
HDAC3-214ENST00000495485 C5orf63A6NC05 138 aa8.83□□□□□ -1
HDAC3-214ENST00000495485 FAM90A10PA6NDY2 464 aa8.83□□□□□ -1
HDAC3-214ENST00000495485 FAM90A18PA6NE21 464 aa8.83□□□□□ -1
HDAC3-214ENST00000495485 FAM90A16PA6NEW6 464 aa8.83□□□□□ -1
HDAC3-214ENST00000495485 FAM90A20PA6NIJ5 464 aa8.83□□□□□ -1
HDAC3-214ENST00000495485 FAM90A8PA6NJQ4 464 aa8.83□□□□□ -1
HDAC3-214ENST00000495485 FAM90A7PA6NKC0 464 aa8.83□□□□□ -1
HDAC3-214ENST00000495485 CD300LBA8K4G0 201 aa8.83□□□□□ -1
HDAC3-214ENST00000495485 FAM90A22PA8MWA6 464 aa8.83□□□□□ -1
HDAC3-214ENST00000495485 FAM90A12PA8MX19 464 aa8.83□□□□□ -1
HDAC3-214ENST00000495485 FAM90A5PA8MXJ8 464 aa8.83□□□□□ -1
HDAC3-214ENST00000495485 FAM90A23PA8MXZ1 464 aa8.83□□□□□ -1
HDAC3-214ENST00000495485 TNFSF13O75888 250 aa8.83□□□□□ -1
HDAC3-214ENST00000495485 RAB3DO95716 219 aa8.83□□□□□ -1
HDAC3-214ENST00000495485 IGKV3-15P01624 115 aa8.83□□□□□ -1
HDAC3-214ENST00000495485 IFNA6P05013 189 aa8.83□□□□□ -1
HDAC3-214ENST00000495485 FAM90A15PP0C7V4 464 aa8.83□□□□□ -1
HDAC3-214ENST00000495485 FAM90A13PP0C7W8 464 aa8.83□□□□□ -1
HDAC3-214ENST00000495485 FAM90A14PP0C7W9 464 aa8.83□□□□□ -1
HDAC3-214ENST00000495485 FAM90A24PP0C7X0 464 aa8.83□□□□□ -1
HDAC3-214ENST00000495485 CCL2P13500 99 aa8.83□□□□□ -1
HDAC3-214ENST00000495485 HIST1H1DP16402 221 aaKnown RBP8.83□□□□□ -1
HDAC3-214ENST00000495485 BLVRBP30043 206 aaPredicted RBP8.83□□□□□ -1
HDAC3-214ENST00000495485 IDH3GP51553 393 aaPredicted RBP8.83□□□□□ -1
HDAC3-214ENST00000495485 UCP2P55851 309 aa8.83□□□□□ -1
HDAC3-214ENST00000495485 PPP1CBP62140 327 aa8.83□□□□□ -1
HDAC3-214ENST00000495485 SORDQ00796 357 aa8.83□□□□□ -1
HDAC3-214ENST00000495485 SRSF1Q07955 248 aaKnown RBP eCLIP8.83□□□□□ -1
HDAC3-214ENST00000495485 PLA2G7Q13093 441 aa8.83□□□□□ -1
HDAC3-214ENST00000495485 PDZK1IP1Q13113 114 aa8.83□□□□□ -1
HDAC3-214ENST00000495485 METTL11BQ5VVY1 283 aa8.83□□□□□ -1
HDAC3-214ENST00000495485 OR10K2Q6IF99 312 aa8.83□□□□□ -1
HDAC3-214ENST00000495485 ASCL4Q6XD76 172 aa8.83□□□□□ -1
HDAC3-214ENST00000495485 SEM1Q6ZVN7 128 aa8.83□□□□□ -1
HDAC3-214ENST00000495485 TRAPPC6BQ86SZ2 158 aa8.83□□□□□ -1
HDAC3-214ENST00000495485 TMEM17Q86X19 198 aa8.83□□□□□ -1
HDAC3-214ENST00000495485 FAM89BQ8N5H3 189 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 99.3 ms