RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 WISP3O95389 354 aaPredicted RBP1.5□□□□□ -2.17
LMNB1-207ENST00000494185 IGHV3-11P01762 117 aa1.5□□□□□ -2.17
LMNB1-207ENST00000494185 S100A6P06703 90 aa1.5□□□□□ -2.17
LMNB1-207ENST00000494185 HSPD1P10809 573 aaKnown RBP1.5□□□□□ -2.17
LMNB1-207ENST00000494185 ZNF35P13682 527 aa1.5□□□□□ -2.17
LMNB1-207ENST00000494185 HLA-GP17693 338 aa1.5□□□□□ -2.17
LMNB1-207ENST00000494185 CD40LGP29965 261 aa1.5□□□□□ -2.17
LMNB1-207ENST00000494185 PRSS3P35030 304 aa1.5□□□□□ -2.17
LMNB1-207ENST00000494185 POLR2IP36954 125 aaKnown RBP1.5□□□□□ -2.17
LMNB1-207ENST00000494185 PSMB2P49721 201 aa1.5□□□□□ -2.17
LMNB1-207ENST00000494185 UBE2G2P60604 165 aa1.5□□□□□ -2.17
LMNB1-207ENST00000494185 C1QTNF8P60827 252 aa1.5□□□□□ -2.17
LMNB1-207ENST00000494185 CDK5Q00535 292 aa1.5□□□□□ -2.17
LMNB1-207ENST00000494185 BAXQ07812 192 aa1.5□□□□□ -2.17
LMNB1-207ENST00000494185 LAMTOR4Q0VGL1 99 aa1.5□□□□□ -2.17
LMNB1-207ENST00000494185 MED21Q13503 144 aa1.5□□□□□ -2.17
LMNB1-207ENST00000494185 RBMY1FQ15415 496 aaKnown RBP1.5□□□□□ -2.17
LMNB1-207ENST00000494185 TRAM1Q15629 374 aa1.5□□□□□ -2.17
LMNB1-207ENST00000494185 PRSS8Q16651 343 aa1.5□□□□□ -2.17
LMNB1-207ENST00000494185 CEACAM21Q3KPI0 293 aa1.5□□□□□ -2.17
LMNB1-207ENST00000494185 FBXL19-AS1Q494R0 122 aa1.5□□□□□ -2.17
LMNB1-207ENST00000494185 C6orf99Q4VX62 202 aa1.5□□□□□ -2.17
LMNB1-207ENST00000494185 HHATQ5VTY9 493 aa1.5□□□□□ -2.17
LMNB1-207ENST00000494185 KDM4DQ6B0I6 523 aa1.5□□□□□ -2.17
LMNB1-207ENST00000494185 TMEM205Q6UW68 189 aa1.5□□□□□ -2.17
LMNB1-207ENST00000494185 PLCZ1Q86YW0 608 aa1.5□□□□□ -2.17
LMNB1-207ENST00000494185 SAXO1Q8IYX7 474 aa1.5□□□□□ -2.17
LMNB1-207ENST00000494185 LYPD1Q8N2G4 141 aa1.5□□□□□ -2.17
LMNB1-207ENST00000494185 OR6N1Q8NGY5 312 aa1.5□□□□□ -2.17
LMNB1-207ENST00000494185 DCAKDQ8WVC6 231 aa1.5□□□□□ -2.17
LMNB1-207ENST00000494185 CDS1Q92903 461 aa1.5□□□□□ -2.17
LMNB1-207ENST00000494185 PPWD1Q96BP3 646 aaKnown RBP1.5□□□□□ -2.17
LMNB1-207ENST00000494185 ZMYND19Q96E35 227 aaPredicted RBP1.5□□□□□ -2.17
LMNB1-207ENST00000494185 MRPL48Q96GC5 212 aaKnown RBP1.5□□□□□ -2.17
LMNB1-207ENST00000494185 SNF8Q96H20 258 aa1.5□□□□□ -2.17
LMNB1-207ENST00000494185 C8orf76Q96K31 380 aa1.5□□□□□ -2.17
LMNB1-207ENST00000494185 Q96MT0 163 aa1.5□□□□□ -2.17
LMNB1-207ENST00000494185 BIRC8Q96P09 236 aa1.5□□□□□ -2.17
LMNB1-207ENST00000494185 OR2M4Q96R27 311 aa1.5□□□□□ -2.17
LMNB1-207ENST00000494185 APOL4Q9BPW4 351 aa1.5□□□□□ -2.17
LMNB1-207ENST00000494185 C7orf50Q9BRJ6 194 aaKnown RBP1.5□□□□□ -2.17
LMNB1-207ENST00000494185 TMEM243Q9BU79 118 aa1.5□□□□□ -2.17
LMNB1-207ENST00000494185 NXF2Q9GZY0 626 aaKnown RBP1.5□□□□□ -2.17
LMNB1-207ENST00000494185 LHX5Q9H2C1 402 aa1.5□□□□□ -2.17
LMNB1-207ENST00000494185 IFI27L2Q9H2X8 130 aa1.5□□□□□ -2.17
LMNB1-207ENST00000494185 DSN1Q9H410 356 aa1.5□□□□□ -2.17
LMNB1-207ENST00000494185 PLEKHF2Q9H8W4 249 aa1.5□□□□□ -2.17
LMNB1-207ENST00000494185 HMG20AQ9NP66 347 aa1.5□□□□□ -2.17
LMNB1-207ENST00000494185 LHX9Q9NQ69 397 aa1.5□□□□□ -2.17
LMNB1-207ENST00000494185 C12orf4Q9NQ89 552 aa1.5□□□□□ -2.17
LMNB1-207ENST00000494185 IMP3Q9NV31 184 aaKnown RBP1.5□□□□□ -2.17
LMNB1-207ENST00000494185 RBM22Q9NW64 420 aaKnown RBP eCLIP1.5□□□□□ -2.17
LMNB1-207ENST00000494185 RBFOX1Q9NWB1 397 aaKnown RBP1.5□□□□□ -2.17
LMNB1-207ENST00000494185 DNAJC27Q9NZQ0 273 aa1.5□□□□□ -2.17
LMNB1-207ENST00000494185 PPIL1Q9Y3C6 166 aa1.5□□□□□ -2.17
LMNB1-207ENST00000494185 ORC6Q9Y5N6 252 aa1.5□□□□□ -2.17
LMNB1-207ENST00000494185 ZNF608Q9ULD9 1512 aaPredicted RBP1.5□□□□□ -2.17
LMNB1-207ENST00000494185 MYO3BQ8WXR4 1341 aa1.49□□□□□ -2.17
LMNB1-207ENST00000494185 A0A1W2PQ67 120 aa1.49□□□□□ -2.17
LMNB1-207ENST00000494185 ZNF705GA8MUZ8 300 aaPredicted RBP1.49□□□□□ -2.17
LMNB1-207ENST00000494185 UPK1AO00322 258 aa1.49□□□□□ -2.17
LMNB1-207ENST00000494185 SULT1C2O00338 296 aa1.49□□□□□ -2.17
LMNB1-207ENST00000494185 UPK2O00526 184 aa1.49□□□□□ -2.17
LMNB1-207ENST00000494185 SLC31A1O15431 190 aa1.49□□□□□ -2.17
LMNB1-207ENST00000494185 AQP9O43315 295 aa1.49□□□□□ -2.17
LMNB1-207ENST00000494185 CHST10O43529 356 aa1.49□□□□□ -2.17
LMNB1-207ENST00000494185 CYTH3O43739 400 aa1.49□□□□□ -2.17
LMNB1-207ENST00000494185 SYNGR1O43759 233 aa1.49□□□□□ -2.17
LMNB1-207ENST00000494185 ENSAO43768 121 aaKnown RBP1.49□□□□□ -2.17
LMNB1-207ENST00000494185 ANGPTL7O43827 346 aa1.49□□□□□ -2.17
LMNB1-207ENST00000494185 NDUFS5O43920 106 aa1.49□□□□□ -2.17
LMNB1-207ENST00000494185 UGT2B11O75310 529 aa1.49□□□□□ -2.17
LMNB1-207ENST00000494185 MYO1DO94832 1006 aa1.49□□□□□ -2.17
LMNB1-207ENST00000494185 KLHL2O95198 593 aa1.49□□□□□ -2.17
LMNB1-207ENST00000494185 IGKV1D-16P01601 117 aa1.49□□□□□ -2.17
LMNB1-207ENST00000494185 MT-ND4P03905 459 aa1.49□□□□□ -2.17
LMNB1-207ENST00000494185 MRPL3P09001 348 aaKnown RBP1.49□□□□□ -2.17
LMNB1-207ENST00000494185 TLX1NBP0CAT3 122 aa1.49□□□□□ -2.17
LMNB1-207ENST00000494185 RPS10P46783 165 aaKnown RBP1.49□□□□□ -2.17
LMNB1-207ENST00000494185 GCLMP48507 274 aa1.49□□□□□ -2.17
LMNB1-207ENST00000494185 TUFMP49411 452 aaKnown RBP1.49□□□□□ -2.17
LMNB1-207ENST00000494185 RPL14P50914 215 aaKnown RBP1.49□□□□□ -2.17
LMNB1-207ENST00000494185 STC1P52823 247 aa1.49□□□□□ -2.17
LMNB1-207ENST00000494185 SLC18A1P54219 525 aa1.49□□□□□ -2.17
LMNB1-207ENST00000494185 AQP5P55064 265 aa1.49□□□□□ -2.17
LMNB1-207ENST00000494185 OR10A3P58181 314 aa1.49□□□□□ -2.17
LMNB1-207ENST00000494185 ESRRGP62508 458 aa1.49□□□□□ -2.17
LMNB1-207ENST00000494185 RAP1AP62834 184 aa1.49□□□□□ -2.17
LMNB1-207ENST00000494185 IL5RAQ01344 420 aa1.49□□□□□ -2.17
LMNB1-207ENST00000494185 PRKCDQ05655 676 aa1.49□□□□□ -2.17
LMNB1-207ENST00000494185 LOXL1Q08397 574 aaPredicted RBP1.49□□□□□ -2.17
LMNB1-207ENST00000494185 TRIP13Q15645 432 aaPredicted RBP1.49□□□□□ -2.17
LMNB1-207ENST00000494185 OR10J3Q5JRS4 329 aa1.49□□□□□ -2.17
LMNB1-207ENST00000494185 CLEC12AQ5QGZ9 265 aa1.49□□□□□ -2.17
LMNB1-207ENST00000494185 AP1ARQ63HQ0 302 aa1.49□□□□□ -2.17
LMNB1-207ENST00000494185 PTRHD1Q6GMV3 140 aaKnown RBP1.49□□□□□ -2.17
LMNB1-207ENST00000494185 OPN5Q6U736 354 aa1.49□□□□□ -2.17
LMNB1-207ENST00000494185 UGT2A3Q6UWM9 527 aa1.49□□□□□ -2.17
LMNB1-207ENST00000494185 FAM151BQ6UXP7 276 aa1.49□□□□□ -2.17
LMNB1-207ENST00000494185 CLEC19AQ6UXS0 136 aa1.49□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms