RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 DPF1Q92782 380 aa14.19□□□□□ -0.14
NUP50-218ENST00000493456 LYVE1Q9Y5Y7 322 aa14.19□□□□□ -0.14
NUP50-218ENST00000493456 TCRBV4S1A1TA0A5B7 111 aa14.18□□□□□ -0.14
NUP50-218ENST00000493456 LYNP07948 512 aa14.18□□□□□ -0.14
NUP50-218ENST00000493456 DLX6P56179 175 aa14.18□□□□□ -0.14
NUP50-218ENST00000493456 OR12D2P58182 307 aa14.18□□□□□ -0.14
NUP50-218ENST00000493456 ZNF770Q6IQ21 691 aaPredicted RBP14.18□□□□□ -0.14
NUP50-218ENST00000493456 LCN8Q6JVE9 175 aa14.18□□□□□ -0.14
NUP50-218ENST00000493456 RNF148Q8N7C7 305 aa14.18□□□□□ -0.14
NUP50-218ENST00000493456 CMTM5Q96DZ9 223 aa14.18□□□□□ -0.14
NUP50-218ENST00000493456 NSMCE2Q96MF7 247 aa14.18□□□□□ -0.14
NUP50-218ENST00000493456 NIPAL2Q9H841 368 aa14.18□□□□□ -0.14
NUP50-218ENST00000493456 CMC2Q9NRP2 79 aa14.18□□□□□ -0.14
NUP50-218ENST00000493456 RYR2Q92736 4967 aa14.17□□□□□ -0.14
NUP50-218ENST00000493456 TNFRSF11BO00300 401 aa14.17□□□□□ -0.14
NUP50-218ENST00000493456 GASTP01350 101 aa14.17□□□□□ -0.14
NUP50-218ENST00000493456 TK1P04183 234 aa14.17□□□□□ -0.14
NUP50-218ENST00000493456 ATP6V1B1P15313 513 aa14.17□□□□□ -0.14
NUP50-218ENST00000493456 LDLRAD2Q5SZI1 272 aa14.17□□□□□ -0.14
NUP50-218ENST00000493456 CCDC121Q6ZUS5 278 aa14.17□□□□□ -0.14
NUP50-218ENST00000493456 C16orf82Q7Z2V1 217 aa14.17□□□□□ -0.14
NUP50-218ENST00000493456 CENPVQ7Z7K6 275 aaPredicted RBP14.17□□□□□ -0.14
NUP50-218ENST00000493456 ZNF454Q8N9F8 522 aa14.17□□□□□ -0.14
NUP50-218ENST00000493456 OR4X2Q8NGF9 303 aa14.17□□□□□ -0.14
NUP50-218ENST00000493456 OTOSQ8NHW6 89 aa14.17□□□□□ -0.14
NUP50-218ENST00000493456 INPP5EQ9NRR6 644 aa14.17□□□□□ -0.14
NUP50-218ENST00000493456 A0A0U1RQV5 110 aa14.16□□□□□ -0.14
NUP50-218ENST00000493456 NOS1APO75052 506 aaPredicted RBP14.16□□□□□ -0.14
NUP50-218ENST00000493456 CCNB2O95067 398 aa14.16□□□□□ -0.14
NUP50-218ENST00000493456 PGA5P0DJD9 388 aa14.16□□□□□ -0.14
NUP50-218ENST00000493456 ZNF728P0DKX0 622 aa14.16□□□□□ -0.14
NUP50-218ENST00000493456 HSD17B1P14061 328 aa14.16□□□□□ -0.14
NUP50-218ENST00000493456 TCTEX1D4Q5JR98 221 aa14.16□□□□□ -0.14
NUP50-218ENST00000493456 MINOS1Q5TGZ0 78 aa14.16□□□□□ -0.14
NUP50-218ENST00000493456 AQP11Q8NBQ7 271 aa14.16□□□□□ -0.14
NUP50-218ENST00000493456 THEM6Q8WUY1 208 aa14.16□□□□□ -0.14
NUP50-218ENST00000493456 MYDGFQ969H8 173 aa14.16□□□□□ -0.14
NUP50-218ENST00000493456 AKR1E2Q96JD6 320 aa14.16□□□□□ -0.14
NUP50-218ENST00000493456 MED20Q9H944 212 aa14.16□□□□□ -0.14
NUP50-218ENST00000493456 ARMC1Q9NVT9 282 aa14.16□□□□□ -0.14
NUP50-218ENST00000493456 POLDIP2Q9Y2S7 368 aa14.16□□□□□ -0.14
NUP50-218ENST00000493456 MINOS1-NBL1R4GNA1 71 aa14.16□□□□□ -0.14
NUP50-218ENST00000493456 DYNC2H1Q8NCM8 4307 aaKnown RBP14.15□□□□□ -0.14
NUP50-218ENST00000493456 FAM183AA6NL82 134 aa14.15□□□□□ -0.14
NUP50-218ENST00000493456 FAM90A22PA8MWA6 464 aa14.15□□□□□ -0.14
NUP50-218ENST00000493456 J3QT63 122 aa14.15□□□□□ -0.14
NUP50-218ENST00000493456 NXPH2O95156 264 aa14.15□□□□□ -0.14
NUP50-218ENST00000493456 SOX14O95416 240 aa14.15□□□□□ -0.14
NUP50-218ENST00000493456 IGHV1-8P0DP01 117 aa14.15□□□□□ -0.14
NUP50-218ENST00000493456 PIPP12273 146 aaPredicted RBP14.15□□□□□ -0.14
NUP50-218ENST00000493456 HOXD3P31249 432 aaPredicted RBP14.15□□□□□ -0.14
NUP50-218ENST00000493456 SLC34A1Q06495 639 aa14.15□□□□□ -0.14
NUP50-218ENST00000493456 DYNC1I2Q13409 638 aaKnown RBP14.15□□□□□ -0.14
NUP50-218ENST00000493456 LCN1P1Q5VSP4 162 aa14.15□□□□□ -0.14
NUP50-218ENST00000493456 PLCXD3Q63HM9 321 aa14.15□□□□□ -0.14
NUP50-218ENST00000493456 OR8B4Q96RC9 309 aa14.15□□□□□ -0.14
NUP50-218ENST00000493456 DNAH7Q8WXX0 4024 aa14.14□□□□□ -0.15
NUP50-218ENST00000493456 ACOD1A6NK06 481 aa14.14□□□□□ -0.15
NUP50-218ENST00000493456 ARPC2O15144 300 aa14.14□□□□□ -0.15
NUP50-218ENST00000493456 CEBPDP49716 269 aaPredicted RBP14.14□□□□□ -0.15
NUP50-218ENST00000493456 RIPPLY1Q0D2K3 151 aa14.14□□□□□ -0.15
NUP50-218ENST00000493456 MOB3CQ70IA8 216 aa14.14□□□□□ -0.15
NUP50-218ENST00000493456 TRPM8Q7Z2W7 1104 aa14.14□□□□□ -0.15
NUP50-218ENST00000493456 PIGWQ7Z7B1 504 aa14.14□□□□□ -0.15
NUP50-218ENST00000493456 ZNF573Q86YE8 665 aa14.14□□□□□ -0.15
NUP50-218ENST00000493456 LINC00482Q8N8I6 264 aa14.14□□□□□ -0.15
NUP50-218ENST00000493456 OTULINQ96BN8 352 aa14.14□□□□□ -0.15
NUP50-218ENST00000493456 ZNF488Q96MN9 340 aa14.14□□□□□ -0.15
NUP50-218ENST00000493456 NRIP2Q9BQI9 281 aa14.14□□□□□ -0.15
NUP50-218ENST00000493456 HES4Q9HCC6 221 aa14.14□□□□□ -0.15
NUP50-218ENST00000493456 HILPDAQ9Y5L2 63 aa14.14□□□□□ -0.15
NUP50-218ENST00000493456 K7N7A8 449 aa14.13□□□□□ -0.15
NUP50-218ENST00000493456 GSC2O15499 205 aa14.13□□□□□ -0.15
NUP50-218ENST00000493456 NHLRC4P0CG21 123 aaPredicted RBP14.13□□□□□ -0.15
NUP50-218ENST00000493456 HAAOP46952 286 aa14.13□□□□□ -0.15
NUP50-218ENST00000493456 IL18R1Q13478 541 aa14.13□□□□□ -0.15
NUP50-218ENST00000493456 KHDC1LQ5JSQ8 128 aa14.13□□□□□ -0.15
NUP50-218ENST00000493456 COMMD2Q86X83 199 aa14.13□□□□□ -0.15
NUP50-218ENST00000493456 NDNFQ8TB73 568 aa14.13□□□□□ -0.15
NUP50-218ENST00000493456 CAPSLQ8WWF8 208 aa14.13□□□□□ -0.15
NUP50-218ENST00000493456 DGCR6LQ9BY27 220 aa14.13□□□□□ -0.15
NUP50-218ENST00000493456 OR51V1Q9H2C8 321 aa14.13□□□□□ -0.15
NUP50-218ENST00000493456 LIN7BQ9HAP6 207 aa14.13□□□□□ -0.15
NUP50-218ENST00000493456 ZMAT5Q9UDW3 170 aaKnown RBP14.13□□□□□ -0.15
NUP50-218ENST00000493456 OR14J1Q9UGF5 321 aa14.13□□□□□ -0.15
NUP50-218ENST00000493456 ENPP5Q9UJA9 477 aa14.13□□□□□ -0.15
NUP50-218ENST00000493456 SACSQ9NZJ4 4579 aa14.12□□□□□ -0.15
NUP50-218ENST00000493456 SELENOFO60613 162 aa14.12□□□□□ -0.15
NUP50-218ENST00000493456 DNAJC8O75937 253 aaPredicted RBP14.12□□□□□ -0.15
NUP50-218ENST00000493456 NRASP01111 189 aa14.12□□□□□ -0.15
NUP50-218ENST00000493456 H2AFXP16104 143 aaPredicted RBP14.12□□□□□ -0.15
NUP50-218ENST00000493456 PRDX6P30041 224 aa14.12□□□□□ -0.15
NUP50-218ENST00000493456 COL10A1Q03692 680 aa14.12□□□□□ -0.15
NUP50-218ENST00000493456 DMRTC1Q5HYR2 192 aa14.12□□□□□ -0.15
NUP50-218ENST00000493456 ZNF684Q5T5D7 378 aa14.12□□□□□ -0.15
NUP50-218ENST00000493456 ZBTB49Q6ZSB9 765 aa14.12□□□□□ -0.15
NUP50-218ENST00000493456 ASCC1Q8N9N2 400 aaKnown RBP14.12□□□□□ -0.15
NUP50-218ENST00000493456 TEX47Q8TBZ9 253 aa14.12□□□□□ -0.15
NUP50-218ENST00000493456 ZNF714Q96N38 554 aa14.12□□□□□ -0.15
NUP50-218ENST00000493456 MCRIP2Q9BUT9 160 aaKnown RBP14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms