RNA–Protein interactions for RNA: ENST00000490099.5

TMEM39A-210, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 868 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-210ENST00000490099 M0R1W7 72 aa7.97□□□□□ -1.13
TMEM39A-210ENST00000490099 DLGAP1O14490 977 aa7.97□□□□□ -1.13
TMEM39A-210ENST00000490099 MRPL3P09001 348 aaKnown RBP7.97□□□□□ -1.13
TMEM39A-210ENST00000490099 MPZP25189 248 aa7.97□□□□□ -1.13
TMEM39A-210ENST00000490099 ALDH3A2P51648 485 aa7.97□□□□□ -1.13
TMEM39A-210ENST00000490099 GPM6AP51674 278 aa7.97□□□□□ -1.13
TMEM39A-210ENST00000490099 ERVK11-1P61568 191 aa7.97□□□□□ -1.13
TMEM39A-210ENST00000490099 LRRC36Q1X8D7 754 aa7.97□□□□□ -1.13
TMEM39A-210ENST00000490099 ZNF829Q3KNS6 432 aaPredicted RBP7.97□□□□□ -1.13
TMEM39A-210ENST00000490099 LPCAT4Q643R3 524 aa7.97□□□□□ -1.13
TMEM39A-210ENST00000490099 VMO1Q7Z5L0 202 aa7.97□□□□□ -1.13
TMEM39A-210ENST00000490099 SLC35F2Q8IXU6 374 aa7.97□□□□□ -1.13
TMEM39A-210ENST00000490099 CBR4Q8N4T8 237 aa7.97□□□□□ -1.13
TMEM39A-210ENST00000490099 C11orf42Q8N5U0 333 aa7.97□□□□□ -1.13
TMEM39A-210ENST00000490099 POC1AQ8NBT0 407 aa7.97□□□□□ -1.13
TMEM39A-210ENST00000490099 OR4F5Q8NH21 305 aa7.97□□□□□ -1.13
TMEM39A-210ENST00000490099 TBC1D15Q8TC07 691 aa7.97□□□□□ -1.13
TMEM39A-210ENST00000490099 AJUBAQ96IF1 538 aa7.97□□□□□ -1.13
TMEM39A-210ENST00000490099 NRIP2Q9BQI9 281 aa7.97□□□□□ -1.13
TMEM39A-210ENST00000490099 GABARAPL3Q9BY60 117 aa7.97□□□□□ -1.13
TMEM39A-210ENST00000490099 MOB1AQ9H8S9 216 aa7.97□□□□□ -1.13
TMEM39A-210ENST00000490099 HES4Q9HCC6 221 aa7.97□□□□□ -1.13
TMEM39A-210ENST00000490099 SNTG1Q9NSN8 517 aa7.97□□□□□ -1.13
TMEM39A-210ENST00000490099 USE1Q9NZ43 259 aa7.97□□□□□ -1.13
TMEM39A-210ENST00000490099 SLC25A10Q9UBX3 287 aaPredicted RBP7.97□□□□□ -1.13
TMEM39A-210ENST00000490099 WARS2Q9UGM6 360 aaKnown RBP7.97□□□□□ -1.13
TMEM39A-210ENST00000490099 R4GMQ9 66 aa7.97□□□□□ -1.13
TMEM39A-210ENST00000490099 TRRAPQ9Y4A5 3859 aa7.96□□□□□ -1.13
TMEM39A-210ENST00000490099 TRBV23-1A0A0A0MS06 115 aa7.96□□□□□ -1.14
TMEM39A-210ENST00000490099 CLPSL1A2RUU4 121 aa7.96□□□□□ -1.14
TMEM39A-210ENST00000490099 LOC110117498-PIK3R3F6TDL0 507 aa7.96□□□□□ -1.14
TMEM39A-210ENST00000490099 M0R129 80 aa7.96□□□□□ -1.14
TMEM39A-210ENST00000490099 EI24O14681 340 aa7.96□□□□□ -1.14
TMEM39A-210ENST00000490099 MAGEB4O15481 346 aaPredicted RBP7.96□□□□□ -1.14
TMEM39A-210ENST00000490099 GPR137BO60478 399 aa7.96□□□□□ -1.14
TMEM39A-210ENST00000490099 SULT1C4O75897 302 aa7.96□□□□□ -1.14
TMEM39A-210ENST00000490099 NRASP01111 189 aa7.96□□□□□ -1.14
TMEM39A-210ENST00000490099 IGHV4-59P01825 116 aa7.96□□□□□ -1.14
TMEM39A-210ENST00000490099 OR2T7P0C7T2 308 aa7.96□□□□□ -1.14
TMEM39A-210ENST00000490099 PGA5P0DJD9 388 aa7.96□□□□□ -1.14
TMEM39A-210ENST00000490099 FAHP16930 419 aa7.96□□□□□ -1.14
TMEM39A-210ENST00000490099 GLRA1P23415 457 aa7.96□□□□□ -1.14
TMEM39A-210ENST00000490099 HTR1FP30939 366 aa7.96□□□□□ -1.14
TMEM39A-210ENST00000490099 UBE2E1P51965 193 aa7.96□□□□□ -1.14
TMEM39A-210ENST00000490099 RAG2P55895 527 aa7.96□□□□□ -1.14
TMEM39A-210ENST00000490099 CXCR4P61073 352 aa7.96□□□□□ -1.14
TMEM39A-210ENST00000490099 ISL1P61371 349 aa7.96□□□□□ -1.14
TMEM39A-210ENST00000490099 ACSM1Q08AH1 577 aa7.96□□□□□ -1.14
TMEM39A-210ENST00000490099 IKZF1Q13422 519 aa7.96□□□□□ -1.14
TMEM39A-210ENST00000490099 TMED1Q13445 227 aa7.96□□□□□ -1.14
TMEM39A-210ENST00000490099 CEP78Q5JTW2 689 aa7.96□□□□□ -1.14
TMEM39A-210ENST00000490099 SLC25A30Q5SVS4 291 aa7.96□□□□□ -1.14
TMEM39A-210ENST00000490099 HCP5Q6MZN7 132 aa7.96□□□□□ -1.14
TMEM39A-210ENST00000490099 HAGHLQ6PII5 290 aaPredicted RBP7.96□□□□□ -1.14
TMEM39A-210ENST00000490099 FIP1L1Q6UN15 594 aaKnown RBP7.96□□□□□ -1.14
TMEM39A-210ENST00000490099 KCTD8Q6ZWB6 473 aa7.96□□□□□ -1.14
TMEM39A-210ENST00000490099 MOB3CQ70IA8 216 aa7.96□□□□□ -1.14
TMEM39A-210ENST00000490099 SSX6Q7RTT6 188 aa7.96□□□□□ -1.14
TMEM39A-210ENST00000490099 ZNF573Q86YE8 665 aa7.96□□□□□ -1.14
TMEM39A-210ENST00000490099 GID4Q8IVV7 300 aa7.96□□□□□ -1.14
TMEM39A-210ENST00000490099 CMTM4Q8IZR5 234 aa7.96□□□□□ -1.14
TMEM39A-210ENST00000490099 ZSCAN4Q8NAM6 433 aaPredicted RBP7.96□□□□□ -1.14
TMEM39A-210ENST00000490099 OR8J1Q8NGP2 316 aa7.96□□□□□ -1.14
TMEM39A-210ENST00000490099 OR2T27Q8NH04 317 aa7.96□□□□□ -1.14
TMEM39A-210ENST00000490099 FAM81AQ8TBF8 368 aa7.96□□□□□ -1.14
TMEM39A-210ENST00000490099 WFDC12Q8WWY7 111 aa7.96□□□□□ -1.14
TMEM39A-210ENST00000490099 IL4I1Q96RQ9 567 aa7.96□□□□□ -1.14
TMEM39A-210ENST00000490099 METTL8Q9H825 291 aaKnown RBP7.96□□□□□ -1.14
TMEM39A-210ENST00000490099 SEBOXQ9HB31 216 aaPredicted RBP7.96□□□□□ -1.14
TMEM39A-210ENST00000490099 H2AFY2Q9P0M6 372 aaPredicted RBP7.96□□□□□ -1.14
TMEM39A-210ENST00000490099 DNAJB11Q9UBS4 358 aa7.96□□□□□ -1.14
TMEM39A-210ENST00000490099 ENPP5Q9UJA9 477 aa7.96□□□□□ -1.14
TMEM39A-210ENST00000490099 OR52A1Q9UKL2 312 aa7.96□□□□□ -1.14
TMEM39A-210ENST00000490099 PIGLQ9Y2B2 252 aa7.96□□□□□ -1.14
TMEM39A-210ENST00000490099 SNX5Q9Y5X3 404 aa7.96□□□□□ -1.14
TMEM39A-210ENST00000490099 MEGF8Q7Z7M0 2845 aa7.96□□□□□ -1.14
TMEM39A-210ENST00000490099 A0A1W2PQL4 384 aaPredicted RBP7.95□□□□□ -1.14
TMEM39A-210ENST00000490099 NKX6-3A6NJ46 265 aa7.95□□□□□ -1.14
TMEM39A-210ENST00000490099 ZNF670-ZNF695F2Z2N8 137 aa7.95□□□□□ -1.14
TMEM39A-210ENST00000490099 J3QT63 122 aa7.95□□□□□ -1.14
TMEM39A-210ENST00000490099 NPFFO15130 113 aa7.95□□□□□ -1.14
TMEM39A-210ENST00000490099 SYNGR1O43759 233 aa7.95□□□□□ -1.14
TMEM39A-210ENST00000490099 CLPXO76031 633 aa7.95□□□□□ -1.14
TMEM39A-210ENST00000490099 TFF1P04155 84 aa7.95□□□□□ -1.14
TMEM39A-210ENST00000490099 ALPLP05186 524 aa7.95□□□□□ -1.14
TMEM39A-210ENST00000490099 OMGP23515 440 aa7.95□□□□□ -1.14
TMEM39A-210ENST00000490099 PROK1P58294 105 aa7.95□□□□□ -1.14
TMEM39A-210ENST00000490099 TAF9Q16594 264 aa7.95□□□□□ -1.14
TMEM39A-210ENST00000490099 DMRTC1Q5HYR2 192 aa7.95□□□□□ -1.14
TMEM39A-210ENST00000490099 CLVS2Q5SYC1 327 aa7.95□□□□□ -1.14
TMEM39A-210ENST00000490099 NCR3LG1Q68D85 454 aa7.95□□□□□ -1.14
TMEM39A-210ENST00000490099 IZUMO2Q6UXV1 221 aa7.95□□□□□ -1.14
TMEM39A-210ENST00000490099 ACP7Q6ZNF0 438 aa7.95□□□□□ -1.14
TMEM39A-210ENST00000490099 THAP5Q7Z6K1 395 aa7.95□□□□□ -1.14
TMEM39A-210ENST00000490099 CATSPERDQ86XM0 798 aa7.95□□□□□ -1.14
TMEM39A-210ENST00000490099 CD177Q8N6Q3 437 aa7.95□□□□□ -1.14
TMEM39A-210ENST00000490099 ZNRF1Q8ND25 227 aa7.95□□□□□ -1.14
TMEM39A-210ENST00000490099 NRG4Q8WWG1 115 aa7.95□□□□□ -1.14
TMEM39A-210ENST00000490099 TRUB1Q8WWH5 349 aaKnown RBP7.95□□□□□ -1.14
TMEM39A-210ENST00000490099 RORBQ92753 470 aa7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms