RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 A0A1B0GTQ1 180 aa11.19□□□□□ -0.62
VPS52-218ENST00000482399 FAM24AA6NFZ4 105 aa11.19□□□□□ -0.62
VPS52-218ENST00000482399 COLCA2A8K830 154 aa11.19□□□□□ -0.62
VPS52-218ENST00000482399 S100A8P05109 93 aa11.19□□□□□ -0.62
VPS52-218ENST00000482399 MDKP21741 143 aaPredicted RBP11.19□□□□□ -0.62
VPS52-218ENST00000482399 PPP1CCP36873 323 aaKnown RBP11.19□□□□□ -0.62
VPS52-218ENST00000482399 PRR18Q8N4B5 295 aa11.19□□□□□ -0.62
VPS52-218ENST00000482399 SAT2Q96F10 170 aaPredicted RBP11.19□□□□□ -0.62
VPS52-218ENST00000482399 BORCS8Q96FH0 119 aa11.19□□□□□ -0.62
VPS52-218ENST00000482399 RARRES2Q99969 163 aa11.19□□□□□ -0.62
VPS52-218ENST00000482399 C19orf12Q9NSK7 152 aa11.19□□□□□ -0.62
VPS52-218ENST00000482399 LHFPL6Q9Y693 200 aa11.19□□□□□ -0.62
VPS52-218ENST00000482399 ZDBF2Q9HCK1 2354 aa11.19□□□□□ -0.62
VPS52-218ENST00000482399 GVINP1Q7Z2Y8 2422 aa11.19□□□□□ -0.62
VPS52-218ENST00000482399 CHATP28329 748 aa11.19□□□□□ -0.62
VPS52-218ENST00000482399 NAAAQ02083 359 aa11.19□□□□□ -0.62
VPS52-218ENST00000482399 MST1LQ2TV78 715 aa11.19□□□□□ -0.62
VPS52-218ENST00000482399 OPN5Q6U736 354 aa11.19□□□□□ -0.62
VPS52-218ENST00000482399 SKA3Q8IX90 412 aa11.19□□□□□ -0.62
VPS52-218ENST00000482399 PIGCQ92535 297 aa11.19□□□□□ -0.62
VPS52-218ENST00000482399 ZNF251Q9BRH9 671 aa11.19□□□□□ -0.62
VPS52-218ENST00000482399 TMEM14DPA8MWL7 114 aa11.19□□□□□ -0.62
VPS52-218ENST00000482399 LDLRAD4O15165 306 aa11.19□□□□□ -0.62
VPS52-218ENST00000482399 TSPAN2O60636 221 aa11.19□□□□□ -0.62
VPS52-218ENST00000482399 F10P00742 488 aa11.19□□□□□ -0.62
VPS52-218ENST00000482399 CLPSP04118 112 aa11.19□□□□□ -0.62
VPS52-218ENST00000482399 FBP1P09467 338 aa11.19□□□□□ -0.62
VPS52-218ENST00000482399 AFF3P51826 1226 aaKnown RBP11.19□□□□□ -0.62
VPS52-218ENST00000482399 RPS18P62269 152 aaKnown RBP11.19□□□□□ -0.62
VPS52-218ENST00000482399 RHEBQ15382 184 aa11.19□□□□□ -0.62
VPS52-218ENST00000482399 SHHQ15465 462 aa11.19□□□□□ -0.62
VPS52-218ENST00000482399 FAM189A2Q15884 450 aa11.19□□□□□ -0.62
VPS52-218ENST00000482399 DOK3Q7L591 496 aa11.19□□□□□ -0.62
VPS52-218ENST00000482399 SLC38A9Q8NBW4 561 aa11.19□□□□□ -0.62
VPS52-218ENST00000482399 OR10S1Q8NGN2 331 aa11.19□□□□□ -0.62
VPS52-218ENST00000482399 PHOSPHO2Q8TCD6 241 aa11.19□□□□□ -0.62
VPS52-218ENST00000482399 KCNK17Q96T54 332 aa11.19□□□□□ -0.62
VPS52-218ENST00000482399 PECRQ9BY49 303 aa11.19□□□□□ -0.62
VPS52-218ENST00000482399 PRO1933Q9H354 126 aa11.19□□□□□ -0.62
VPS52-218ENST00000482399 CFAP54Q96N23 3096 aa11.18□□□□□ -0.62
VPS52-218ENST00000482399 CELSR3Q9NYQ7 3312 aa11.18□□□□□ -0.62
VPS52-218ENST00000482399 A0A1W2PPC4 97 aa11.18□□□□□ -0.62
VPS52-218ENST00000482399 BLACEA4D250 179 aa11.18□□□□□ -0.62
VPS52-218ENST00000482399 MFNGO00587 321 aa11.18□□□□□ -0.62
VPS52-218ENST00000482399 TAAR5O14804 337 aa11.18□□□□□ -0.62
VPS52-218ENST00000482399 DUX1O43812 170 aa11.18□□□□□ -0.62
VPS52-218ENST00000482399 SSSCA1O60232 199 aa11.18□□□□□ -0.62
VPS52-218ENST00000482399 MELTFP08582 738 aa11.18□□□□□ -0.62
VPS52-218ENST00000482399 HOXC4P09017 264 aaPredicted RBP11.18□□□□□ -0.62
VPS52-218ENST00000482399 MRPS21P82921 87 aaKnown RBP11.18□□□□□ -0.62
VPS52-218ENST00000482399 DEFA6Q01524 100 aa11.18□□□□□ -0.62
VPS52-218ENST00000482399 GPR157Q5UAW9 335 aa11.18□□□□□ -0.62
VPS52-218ENST00000482399 TMEM268Q5VZI3 342 aa11.18□□□□□ -0.62
VPS52-218ENST00000482399 PLXDC1Q8IUK5 500 aa11.18□□□□□ -0.62
VPS52-218ENST00000482399 ZNF695Q8IW36 515 aa11.18□□□□□ -0.62
VPS52-218ENST00000482399 SLC25A43Q8WUT9 341 aaPredicted RBP11.18□□□□□ -0.62
VPS52-218ENST00000482399 CA14Q9ULX7 337 aa11.18□□□□□ -0.62
VPS52-218ENST00000482399 EPOPA6NHQ4 379 aa11.18□□□□□ -0.62
VPS52-218ENST00000482399 ZFP92A6NM28 416 aa11.18□□□□□ -0.62
VPS52-218ENST00000482399 ZNF724A8MTY0 619 aa11.18□□□□□ -0.62
VPS52-218ENST00000482399 IGKV3-11P04433 115 aa11.18□□□□□ -0.62
VPS52-218ENST00000482399 ISG15P05161 165 aa11.18□□□□□ -0.62
VPS52-218ENST00000482399 ANOS1P23352 680 aa11.18□□□□□ -0.62
VPS52-218ENST00000482399 DUSP1P28562 367 aa11.18□□□□□ -0.62
VPS52-218ENST00000482399 APOBEC1P41238 236 aaKnown RBP11.18□□□□□ -0.62
VPS52-218ENST00000482399 SULT1A2P50226 295 aa11.18□□□□□ -0.62
VPS52-218ENST00000482399 IGLV3-21P80748 117 aaPredicted RBP11.18□□□□□ -0.62
VPS52-218ENST00000482399 TSC22D1Q15714 1073 aa11.18□□□□□ -0.62
VPS52-218ENST00000482399 ACER2Q5QJU3 275 aa11.18□□□□□ -0.62
VPS52-218ENST00000482399 THEM4Q5T1C6 240 aa11.18□□□□□ -0.62
VPS52-218ENST00000482399 ZNF343Q6P1L6 599 aa11.18□□□□□ -0.62
VPS52-218ENST00000482399 OR5AS1Q8N127 324 aa11.18□□□□□ -0.62
VPS52-218ENST00000482399 C15orf54Q8N8G6 183 aa11.18□□□□□ -0.62
VPS52-218ENST00000482399 OR10D4PQ8NGN7 298 aa11.18□□□□□ -0.62
VPS52-218ENST00000482399 MYOZ1Q9NP98 299 aaPredicted RBP11.18□□□□□ -0.62
VPS52-218ENST00000482399 NUDT19A8MXV4 375 aa11.17□□□□□ -0.62
VPS52-218ENST00000482399 F8VVB4 439 aa11.17□□□□□ -0.62
VPS52-218ENST00000482399 F8VWA3 439 aa11.17□□□□□ -0.62
VPS52-218ENST00000482399 ST8SIA3O43173 380 aa11.17□□□□□ -0.62
VPS52-218ENST00000482399 HYAL1Q12794 435 aa11.17□□□□□ -0.62
VPS52-218ENST00000482399 DEGS2Q6QHC5 323 aa11.17□□□□□ -0.62
VPS52-218ENST00000482399 POC1AQ8NBT0 407 aa11.17□□□□□ -0.62
VPS52-218ENST00000482399 OR1J1Q8NGS3 322 aa11.17□□□□□ -0.62
VPS52-218ENST00000482399 AQP10Q96PS8 301 aa11.17□□□□□ -0.62
VPS52-218ENST00000482399 ULBP2Q9BZM5 246 aa11.17□□□□□ -0.62
VPS52-218ENST00000482399 OR51B6Q9H340 312 aa11.17□□□□□ -0.62
VPS52-218ENST00000482399 ZNF581Q9P0T4 197 aa11.17□□□□□ -0.62
VPS52-218ENST00000482399 MCTS1Q9ULC4 181 aaKnown RBP11.17□□□□□ -0.62
VPS52-218ENST00000482399 MMP17Q9ULZ9 603 aa11.17□□□□□ -0.62
VPS52-218ENST00000482399 DNAJC13O75165 2243 aa11.17□□□□□ -0.62
VPS52-218ENST00000482399 NCOR1O75376 2440 aa11.17□□□□□ -0.62
VPS52-218ENST00000482399 A0A1B0GX78 115 aa11.17□□□□□ -0.62
VPS52-218ENST00000482399 M0R135 149 aa11.17□□□□□ -0.62
VPS52-218ENST00000482399 HNRNPKP61978 463 aaKnown RBP eCLIP11.17□□□□□ -0.624e-9■■□□□ 12.6
VPS52-218ENST00000482399 POLR2GP62487 172 aaKnown RBP eCLIP11.17□□□□□ -0.62
VPS52-218ENST00000482399 TMEM156Q8N614 296 aa11.17□□□□□ -0.62
VPS52-218ENST00000482399 ZNF799Q96GE5 643 aa11.17□□□□□ -0.62
VPS52-218ENST00000482399 TOLLIPQ9H0E2 274 aa11.17□□□□□ -0.62
VPS52-218ENST00000482399 WNT16Q9UBV4 365 aa11.17□□□□□ -0.62
VPS52-218ENST00000482399 AK3Q9UIJ7 227 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms