RNA–Protein interactions for RNA: ENST00000476855.5

PSMD4-211, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 2

Gene PSMD4, Length 1,232 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-211	ENST00000476855	CELF2-AS1	Q8N7Q2	184 aa		13.44	□□□□□ -0.26
PSMD4-211	ENST00000476855	OR4D6	Q8NGJ1	314 aa		13.44	□□□□□ -0.26
PSMD4-211	ENST00000476855	SPATA3	Q8NHX4	192 aa		13.44	□□□□□ -0.26
PSMD4-211	ENST00000476855	FOXRED1	Q96CU9	486 aa	Predicted RBP	13.44	□□□□□ -0.26
PSMD4-211	ENST00000476855	MEGF10	Q96KG7	1140 aa		13.44	□□□□□ -0.26
PSMD4-211	ENST00000476855	DIRC2	Q96SL1	478 aa		13.44	□□□□□ -0.26
PSMD4-211	ENST00000476855	DCUN1D5	Q9BTE7	237 aa		13.44	□□□□□ -0.26
PSMD4-211	ENST00000476855	TLNRD1	Q9H1K6	362 aa		13.44	□□□□□ -0.26
PSMD4-211	ENST00000476855	OR51I2	Q9H344	312 aa		13.44	□□□□□ -0.26
PSMD4-211	ENST00000476855	CNTD2	Q9H8S5	307 aa		13.44	□□□□□ -0.26
PSMD4-211	ENST00000476855	DYNLRB1	Q9NP97	96 aa		13.44	□□□□□ -0.26
PSMD4-211	ENST00000476855	PMF1-BGLAP	U3KQ54	211 aa		13.44	□□□□□ -0.26
PSMD4-211	ENST00000476855	LRP5L	A4QPB2	252 aa		13.43	□□□□□ -0.26
PSMD4-211	ENST00000476855	COL6A5	A8TX70	2615 aa		13.43	□□□□□ -0.26
PSMD4-211	ENST00000476855	OCM	P0CE72	109 aa	Predicted RBP	13.43	□□□□□ -0.26
PSMD4-211	ENST00000476855	SLC2A2	P11168	524 aa	Predicted RBP	13.43	□□□□□ -0.26
PSMD4-211	ENST00000476855	MPZ	P25189	248 aa		13.43	□□□□□ -0.26
PSMD4-211	ENST00000476855	OR3A4P	P47883	348 aa		13.43	□□□□□ -0.26
PSMD4-211	ENST00000476855	RORC	P51449	518 aa		13.43	□□□□□ -0.26
PSMD4-211	ENST00000476855	MTCP1	P56278	107 aa		13.43	□□□□□ -0.26
PSMD4-211	ENST00000476855	RIN1	Q13671	783 aa		13.43	□□□□□ -0.26
PSMD4-211	ENST00000476855	FAM209A	Q5JX71	171 aa		13.43	□□□□□ -0.26
PSMD4-211	ENST00000476855	HES5	Q5TA89	166 aa		13.43	□□□□□ -0.26
PSMD4-211	ENST00000476855	PRAMEF6	Q5VXH4	476 aa		13.43	□□□□□ -0.26
PSMD4-211	ENST00000476855	ANGPTL5	Q86XS5	388 aa		13.43	□□□□□ -0.26
PSMD4-211	ENST00000476855	C11orf53	Q8IXP5	236 aa		13.43	□□□□□ -0.26
PSMD4-211	ENST00000476855	OR6M1	Q8NGM8	313 aa		13.43	□□□□□ -0.26
PSMD4-211	ENST00000476855	ITLN1	Q8WWA0	313 aa		13.43	□□□□□ -0.26
PSMD4-211	ENST00000476855	C1orf147	Q96MC9	270 aa	Predicted RBP	13.43	□□□□□ -0.26
PSMD4-211	ENST00000476855	SORCS2	Q96PQ0	1159 aa		13.43	□□□□□ -0.26
PSMD4-211	ENST00000476855	OR2V2	Q96R30	315 aa		13.43	□□□□□ -0.26
PSMD4-211	ENST00000476855	SLIRP	Q9GZT3	109 aa	Known RBP	13.43	□□□□□ -0.26
PSMD4-211	ENST00000476855	MS4A5	Q9H3V2	200 aa		13.43	□□□□□ -0.26
PSMD4-211	ENST00000476855	C14orf119	Q9NWQ9	140 aa		13.43	□□□□□ -0.26
PSMD4-211	ENST00000476855	NKIRAS2	Q9NYR9	191 aa		13.43	□□□□□ -0.26
PSMD4-211	ENST00000476855	IL19	Q9UHD0	177 aa		13.43	□□□□□ -0.26
PSMD4-211	ENST00000476855	FBXO9	Q9UK97	447 aa	Predicted RBP	13.43	□□□□□ -0.26
PSMD4-211	ENST00000476855		J3QT63	122 aa		13.42	□□□□□ -0.26
PSMD4-211	ENST00000476855	HTR2C	P28335	458 aa		13.42	□□□□□ -0.26
PSMD4-211	ENST00000476855	GATA4	P43694	442 aa		13.42	□□□□□ -0.26
PSMD4-211	ENST00000476855	TNFAIP6	P98066	277 aa	Predicted RBP	13.42	□□□□□ -0.26
PSMD4-211	ENST00000476855	MZT1	Q08AG7	82 aa		13.42	□□□□□ -0.26
PSMD4-211	ENST00000476855	PDZK1IP1	Q13113	114 aa		13.42	□□□□□ -0.26
PSMD4-211	ENST00000476855	MPPED2	Q15777	294 aa		13.42	□□□□□ -0.26
PSMD4-211	ENST00000476855	ASCL4	Q6XD76	172 aa		13.42	□□□□□ -0.26
PSMD4-211	ENST00000476855	C20orf204	Q6ZNR8	217 aa		13.42	□□□□□ -0.26
PSMD4-211	ENST00000476855	C1QL2	Q7Z5L3	287 aa		13.42	□□□□□ -0.26
PSMD4-211	ENST00000476855	CROCCP3	Q8IVE0	287 aa		13.42	□□□□□ -0.26
PSMD4-211	ENST00000476855	SCCPDH	Q8NBX0	429 aa		13.42	□□□□□ -0.26
PSMD4-211	ENST00000476855	OR5D18	Q8NGL1	313 aa		13.42	□□□□□ -0.26
PSMD4-211	ENST00000476855	CPNE2	Q96FN4	548 aa	Predicted RBP	13.42	□□□□□ -0.26
PSMD4-211	ENST00000476855	GPER1	Q99527	375 aa		13.42	□□□□□ -0.26
PSMD4-211	ENST00000476855	PKIB	Q9C010	78 aa		13.42	□□□□□ -0.26
PSMD4-211	ENST00000476855	NXF2	Q9GZY0	626 aa	Known RBP	13.42	□□□□□ -0.26
PSMD4-211	ENST00000476855	PLGRKT	Q9HBL7	147 aa		13.42	□□□□□ -0.26
PSMD4-211	ENST00000476855	STEAP1	Q9UHE8	339 aa		13.42	□□□□□ -0.26
PSMD4-211	ENST00000476855	DAPK2	Q9UIK4	370 aa		13.42	□□□□□ -0.26
PSMD4-211	ENST00000476855	FBN1	P35555	2871 aa	Known RBP	13.42	□□□□□ -0.26
PSMD4-211	ENST00000476855	CSPG4	Q6UVK1	2322 aa		13.42	□□□□□ -0.26
PSMD4-211	ENST00000476855		A0A0B4J203	849 aa		13.41	□□□□□ -0.26
PSMD4-211	ENST00000476855	SPRY1	O43609	319 aa	Predicted RBP	13.41	□□□□□ -0.26
PSMD4-211	ENST00000476855	SYNGR1	O43759	233 aa		13.41	□□□□□ -0.26
PSMD4-211	ENST00000476855	TMEM127	O75204	238 aa		13.41	□□□□□ -0.26
PSMD4-211	ENST00000476855	GRP	P07492	148 aa		13.41	□□□□□ -0.26
PSMD4-211	ENST00000476855	TNFSF4	P23510	183 aa		13.41	□□□□□ -0.26
PSMD4-211	ENST00000476855	PTGFR	P43088	359 aa		13.41	□□□□□ -0.26
PSMD4-211	ENST00000476855	HAAO	P46952	286 aa		13.41	□□□□□ -0.26
PSMD4-211	ENST00000476855	POU3F4	P49335	361 aa		13.41	□□□□□ -0.26
PSMD4-211	ENST00000476855	SRP9	P49458	86 aa	Known RBP	13.41	□□□□□ -0.26
PSMD4-211	ENST00000476855	CLDN12	P56749	244 aa		13.41	□□□□□ -0.26
PSMD4-211	ENST00000476855	RAB11B	Q15907	218 aa		13.41	□□□□□ -0.26
PSMD4-211	ENST00000476855	HAGHL	Q6PII5	290 aa	Predicted RBP	13.41	□□□□□ -0.26
PSMD4-211	ENST00000476855	ZNF573	Q86YE8	665 aa		13.41	□□□□□ -0.26
PSMD4-211	ENST00000476855	PNLDC1	Q8NA58	520 aa	Known RBP	13.41	□□□□□ -0.26
PSMD4-211	ENST00000476855	PXT1	Q8NFP0	134 aa		13.41	□□□□□ -0.26
PSMD4-211	ENST00000476855	TNFAIP8L1	Q8WVP5	186 aa		13.41	□□□□□ -0.26
PSMD4-211	ENST00000476855	AQP3	Q92482	292 aa		13.41	□□□□□ -0.26
PSMD4-211	ENST00000476855	CACNG6	Q9BXT2	260 aa		13.41	□□□□□ -0.26
PSMD4-211	ENST00000476855	LAMP3	Q9UQV4	416 aa		13.41	□□□□□ -0.26
PSMD4-211	ENST00000476855	MRPS28	Q9Y2Q9	187 aa	Known RBP	13.41	□□□□□ -0.26
PSMD4-211	ENST00000476855	STAB1	Q9NY15	2570 aa		13.41	□□□□□ -0.26
PSMD4-211	ENST00000476855	IGKV1-12	A0A0C4DH73	117 aa		13.4	□□□□□ -0.26
PSMD4-211	ENST00000476855	IGHV3-64D	A0A0J9YX35	117 aa		13.4	□□□□□ -0.26
PSMD4-211	ENST00000476855		H7C417	338 aa		13.4	□□□□□ -0.26
PSMD4-211	ENST00000476855	OVOL3	O00110	214 aa		13.4	□□□□□ -0.26
PSMD4-211	ENST00000476855	LY6G6D	O95868	133 aa		13.4	□□□□□ -0.26
PSMD4-211	ENST00000476855	PLAT	P00750	562 aa		13.4	□□□□□ -0.26
PSMD4-211	ENST00000476855	IGKV1D-12	P01611	117 aa		13.4	□□□□□ -0.26
PSMD4-211	ENST00000476855	SOX6	P35712	828 aa		13.4	□□□□□ -0.26
PSMD4-211	ENST00000476855	PMEL	P40967	661 aa		13.4	□□□□□ -0.26
PSMD4-211	ENST00000476855	CCL8	P80075	99 aa		13.4	□□□□□ -0.26
PSMD4-211	ENST00000476855	QRFP	P83859	136 aa		13.4	□□□□□ -0.26
PSMD4-211	ENST00000476855	IL24	Q13007	206 aa		13.4	□□□□□ -0.26
PSMD4-211	ENST00000476855	P2RY14	Q15391	338 aa		13.4	□□□□□ -0.26
PSMD4-211	ENST00000476855	PCGF3	Q3KNV8	242 aa		13.4	□□□□□ -0.26
PSMD4-211	ENST00000476855	IDNK	Q5T6J7	187 aa		13.4	□□□□□ -0.26
PSMD4-211	ENST00000476855	SHE	Q5VZ18	495 aa		13.4	□□□□□ -0.26
PSMD4-211	ENST00000476855	AWAT2	Q6E213	333 aa		13.4	□□□□□ -0.26
PSMD4-211	ENST00000476855	KRTAP1-3	Q8IUG1	177 aa		13.4	□□□□□ -0.26
PSMD4-211	ENST00000476855	SAXO1	Q8IYX7	474 aa		13.4	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 35 ms