RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 THNSL2Q86YJ6 484 aa4.1□□□□□ -1.75
SNRNP40-204ENST00000474025 ZDHHC23Q8IYP9 409 aa4.1□□□□□ -1.75
SNRNP40-204ENST00000474025 CD177Q8N6Q3 437 aa4.1□□□□□ -1.75
SNRNP40-204ENST00000474025 SLC37A3Q8NCC5 494 aa4.1□□□□□ -1.75
SNRNP40-204ENST00000474025 OR11H6Q8NGC7 330 aa4.1□□□□□ -1.75
SNRNP40-204ENST00000474025 OR4M1Q8NGD0 313 aa4.1□□□□□ -1.75
SNRNP40-204ENST00000474025 OR8D4Q8NGM9 314 aa4.1□□□□□ -1.75
SNRNP40-204ENST00000474025 CHAC2Q8WUX2 184 aa4.1□□□□□ -1.75
SNRNP40-204ENST00000474025 RNF133Q8WVZ7 376 aa4.1□□□□□ -1.75
SNRNP40-204ENST00000474025 DPF1Q92782 380 aa4.1□□□□□ -1.75
SNRNP40-204ENST00000474025 FAM162AQ96A26 154 aa4.1□□□□□ -1.75
SNRNP40-204ENST00000474025 MALSU1Q96EH3 234 aa4.1□□□□□ -1.75
SNRNP40-204ENST00000474025 RNF170Q96K19 258 aa4.1□□□□□ -1.75
SNRNP40-204ENST00000474025 LYZL4Q96KX0 146 aa4.1□□□□□ -1.75
SNRNP40-204ENST00000474025 ATP6V1G3Q96LB4 118 aa4.1□□□□□ -1.75
SNRNP40-204ENST00000474025 AMELYQ99218 206 aa4.1□□□□□ -1.75
SNRNP40-204ENST00000474025 KRTAP17-1Q9BYP8 105 aa4.1□□□□□ -1.75
SNRNP40-204ENST00000474025 NMNAT2Q9BZQ4 307 aa4.1□□□□□ -1.75
SNRNP40-204ENST00000474025 OR10A2Q9H208 303 aa4.1□□□□□ -1.75
SNRNP40-204ENST00000474025 OR51I2Q9H344 312 aa4.1□□□□□ -1.75
SNRNP40-204ENST00000474025 RGCCQ9H4X1 137 aa4.1□□□□□ -1.75
SNRNP40-204ENST00000474025 EGLN3Q9H6Z9 239 aa4.1□□□□□ -1.75
SNRNP40-204ENST00000474025 YY1AP1Q9H869 796 aa4.1□□□□□ -1.75
SNRNP40-204ENST00000474025 INTS9Q9NV88 658 aaKnown RBP4.1□□□□□ -1.75
SNRNP40-204ENST00000474025 USE1Q9NZ43 259 aa4.1□□□□□ -1.75
SNRNP40-204ENST00000474025 DNAJC27Q9NZQ0 273 aa4.1□□□□□ -1.75
SNRNP40-204ENST00000474025 PFDN2Q9UHV9 154 aa4.1□□□□□ -1.75
SNRNP40-204ENST00000474025 CDH10Q9Y6N8 788 aa4.1□□□□□ -1.75
SNRNP40-204ENST00000474025 HERC2O95714 4834 aa4.09□□□□□ -1.75
SNRNP40-204ENST00000474025 HECTD4Q9Y4D8 3996 aa4.09□□□□□ -1.75
SNRNP40-204ENST00000474025 C17orf98A8MV24 154 aa4.09□□□□□ -1.75
SNRNP40-204ENST00000474025 FAM90A22PA8MWA6 464 aa4.09□□□□□ -1.75
SNRNP40-204ENST00000474025 ZNF732B4DXR9 585 aa4.09□□□□□ -1.75
SNRNP40-204ENST00000474025 H0YHG0 523 aa4.09□□□□□ -1.75
SNRNP40-204ENST00000474025 SLC1A7O00341 560 aa4.09□□□□□ -1.75
SNRNP40-204ENST00000474025 GADD45GO95257 159 aa4.09□□□□□ -1.75
SNRNP40-204ENST00000474025 APOC1P02654 83 aa4.09□□□□□ -1.75
SNRNP40-204ENST00000474025 RBP4P02753 201 aa4.09□□□□□ -1.75
SNRNP40-204ENST00000474025 SEMG1P04279 462 aa4.09□□□□□ -1.75
SNRNP40-204ENST00000474025 CHRM2P08172 466 aa4.09□□□□□ -1.75
SNRNP40-204ENST00000474025 CCDC159P0C7I6 412 aa4.09□□□□□ -1.75
SNRNP40-204ENST00000474025 CLUP10909 449 aa4.09□□□□□ -1.75
SNRNP40-204ENST00000474025 SPI1P17947 270 aa4.09□□□□□ -1.75
SNRNP40-204ENST00000474025 AZGP1P25311 298 aaKnown RBP4.09□□□□□ -1.75
SNRNP40-204ENST00000474025 IFNGR2P38484 337 aa4.09□□□□□ -1.75
SNRNP40-204ENST00000474025 CEBPDP49716 269 aaPredicted RBP4.09□□□□□ -1.75
SNRNP40-204ENST00000474025 GP2P55259 537 aaKnown RBP4.09□□□□□ -1.75
SNRNP40-204ENST00000474025 SMIM11AP58511 58 aa4.09□□□□□ -1.75
SNRNP40-204ENST00000474025 SLC34A1Q06495 639 aa4.09□□□□□ -1.75
SNRNP40-204ENST00000474025 CRMP1Q14194 572 aa4.09□□□□□ -1.75
SNRNP40-204ENST00000474025 KRT72Q14CN4 511 aa4.09□□□□□ -1.75
SNRNP40-204ENST00000474025 SMIM21Q3B7S5 101 aa4.09□□□□□ -1.75
SNRNP40-204ENST00000474025 KHDC1LQ5JSQ8 128 aa4.09□□□□□ -1.75
SNRNP40-204ENST00000474025 CEP78Q5JTW2 689 aa4.09□□□□□ -1.75
SNRNP40-204ENST00000474025 CASC10Q5T4H9 136 aa4.09□□□□□ -1.75
SNRNP40-204ENST00000474025 LINC01590Q5TEZ4 76 aa4.09□□□□□ -1.75
SNRNP40-204ENST00000474025 ZNF770Q6IQ21 691 aaPredicted RBP4.09□□□□□ -1.75
SNRNP40-204ENST00000474025 LCN8Q6JVE9 175 aa4.09□□□□□ -1.75
SNRNP40-204ENST00000474025 C10orf99Q6UWK7 81 aa4.09□□□□□ -1.75
SNRNP40-204ENST00000474025 ACP7Q6ZNF0 438 aa4.09□□□□□ -1.75
SNRNP40-204ENST00000474025 KRT74Q7RTS7 529 aa4.09□□□□□ -1.75
SNRNP40-204ENST00000474025 CENPVQ7Z7K6 275 aaPredicted RBP4.09□□□□□ -1.75
SNRNP40-204ENST00000474025 CALHM1Q8IU99 346 aa4.09□□□□□ -1.75
SNRNP40-204ENST00000474025 MRPL41Q8IXM3 137 aaKnown RBP4.09□□□□□ -1.75
SNRNP40-204ENST00000474025 TIGD4Q8IY51 512 aa4.09□□□□□ -1.75
SNRNP40-204ENST00000474025 ZNF561Q8N587 486 aa4.09□□□□□ -1.75
SNRNP40-204ENST00000474025 OR4X2Q8NGF9 303 aa4.09□□□□□ -1.75
SNRNP40-204ENST00000474025 OR52L1Q8NGH7 329 aa4.09□□□□□ -1.75
SNRNP40-204ENST00000474025 OR13D1Q8NGV5 346 aa4.09□□□□□ -1.75
SNRNP40-204ENST00000474025 OR6K6Q8NGW6 343 aa4.09□□□□□ -1.75
SNRNP40-204ENST00000474025 OR2T27Q8NH04 317 aa4.09□□□□□ -1.75
SNRNP40-204ENST00000474025 AQP3Q92482 292 aa4.09□□□□□ -1.75
SNRNP40-204ENST00000474025 PIGCQ92535 297 aa4.09□□□□□ -1.75
SNRNP40-204ENST00000474025 PGAM5Q96HS1 289 aa4.09□□□□□ -1.75
SNRNP40-204ENST00000474025 KCTD14Q9BQ13 255 aaPredicted RBP4.09□□□□□ -1.75
SNRNP40-204ENST00000474025 ABHD6Q9BV23 337 aa4.09□□□□□ -1.75
SNRNP40-204ENST00000474025 CHID1Q9BWS9 393 aa4.09□□□□□ -1.75
SNRNP40-204ENST00000474025 DCAF13Q9NV06 445 aaKnown RBP4.09□□□□□ -1.75
SNRNP40-204ENST00000474025 IL20Q9NYY1 176 aa4.09□□□□□ -1.75
SNRNP40-204ENST00000474025 ABCD2Q9UBJ2 740 aa4.09□□□□□ -1.75
SNRNP40-204ENST00000474025 SAMD4AQ9UPU9 718 aaKnown RBP4.09□□□□□ -1.75
SNRNP40-204ENST00000474025 KMT2AQ03164 3969 aa4.08□□□□□ -1.76
SNRNP40-204ENST00000474025 MEX3AA1L020 520 aaKnown RBP4.08□□□□□ -1.76
SNRNP40-204ENST00000474025 OR5B21A6NL26 309 aa4.08□□□□□ -1.76
SNRNP40-204ENST00000474025 B2RBV5 119 aa4.08□□□□□ -1.76
SNRNP40-204ENST00000474025 SLC22A2O15244 555 aa4.08□□□□□ -1.76
SNRNP40-204ENST00000474025 TK1P04183 234 aa4.08□□□□□ -1.76
SNRNP40-204ENST00000474025 AMY1AP04745 511 aa4.08□□□□□ -1.76
SNRNP40-204ENST00000474025 AMY2AP04746 511 aa4.08□□□□□ -1.76
SNRNP40-204ENST00000474025 LPLP06858 475 aa4.08□□□□□ -1.76
SNRNP40-204ENST00000474025 PGA5P0DJD9 388 aa4.08□□□□□ -1.76
SNRNP40-204ENST00000474025 ZNF728P0DKX0 622 aa4.08□□□□□ -1.76
SNRNP40-204ENST00000474025 IGHV1-8P0DP01 117 aa4.08□□□□□ -1.76
SNRNP40-204ENST00000474025 PIPP12273 146 aaPredicted RBP4.08□□□□□ -1.76
SNRNP40-204ENST00000474025 LMO1P25800 156 aa4.08□□□□□ -1.76
SNRNP40-204ENST00000474025 CALRP27797 417 aaKnown RBP4.08□□□□□ -1.76
SNRNP40-204ENST00000474025 RRM2P31350 389 aa4.08□□□□□ -1.76
SNRNP40-204ENST00000474025 PRDX2P32119 198 aa4.08□□□□□ -1.76
SNRNP40-204ENST00000474025 THBS3P49746 956 aa4.08□□□□□ -1.76
SNRNP40-204ENST00000474025 OR12D2P58182 307 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms