RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 LGI3Q8N145 548 aa7.82□□□□□ -1.16
RTN4-206ENST00000394611 DAZLQ92904 295 aaKnown RBP7.82□□□□□ -1.16
RTN4-206ENST00000394611 OR51M1Q9H341 326 aa7.82□□□□□ -1.16
RTN4-206ENST00000394611 C1orf198Q9H425 327 aa7.82□□□□□ -1.16
RTN4-206ENST00000394611 VSTM2BA6NLU5 285 aa7.82□□□□□ -1.16
RTN4-206ENST00000394611 SLC35E2P0CK97 266 aa7.82□□□□□ -1.16
RTN4-206ENST00000394611 ZNF121P58317 390 aaPredicted RBP7.82□□□□□ -1.16
RTN4-206ENST00000394611 SRYQ05066 204 aa7.82□□□□□ -1.16
RTN4-206ENST00000394611 PMS2P11Q13670 270 aa7.82□□□□□ -1.16
RTN4-206ENST00000394611 SPINK9Q5DT21 86 aa7.82□□□□□ -1.16
RTN4-206ENST00000394611 SLC35D3Q5M8T2 416 aa7.82□□□□□ -1.16
RTN4-206ENST00000394611 UQCC3Q6UW78 93 aa7.82□□□□□ -1.16
RTN4-206ENST00000394611 ZNF66Q6ZN08 573 aa7.82□□□□□ -1.16
RTN4-206ENST00000394611 MCEMP1Q8IX19 187 aa7.82□□□□□ -1.16
RTN4-206ENST00000394611 CYB561D1Q8N8Q1 229 aa7.82□□□□□ -1.16
RTN4-206ENST00000394611 PACRGQ96M98 296 aaPredicted RBP7.82□□□□□ -1.16
RTN4-206ENST00000394611 PBOV1Q9GZY1 135 aa7.82□□□□□ -1.16
RTN4-206ENST00000394611 CBLN4Q9NTU7 201 aa7.82□□□□□ -1.16
RTN4-206ENST00000394611 PIGLQ9Y2B2 252 aa7.82□□□□□ -1.16
RTN4-206ENST00000394611 A0A0J9YY10 115 aa7.82□□□□□ -1.16
RTN4-206ENST00000394611 JTBO76095 146 aa7.82□□□□□ -1.16
RTN4-206ENST00000394611 PGA4P0DJD7 388 aa7.82□□□□□ -1.16
RTN4-206ENST00000394611 PGA5P0DJD9 388 aa7.82□□□□□ -1.16
RTN4-206ENST00000394611 GALP22466 123 aa7.82□□□□□ -1.16
RTN4-206ENST00000394611 ACKR3P25106 362 aa7.82□□□□□ -1.16
RTN4-206ENST00000394611 HNRNPKP61978 463 aaKnown RBP eCLIP7.82□□□□□ -1.166e-10■□□□□ 9.3
RTN4-206ENST00000394611 ZNF117Q03924 483 aa7.82□□□□□ -1.16
RTN4-206ENST00000394611 ADAMTSL4Q6UY14 1074 aa7.82□□□□□ -1.16
RTN4-206ENST00000394611 ERASQ7Z444 233 aa7.82□□□□□ -1.16
RTN4-206ENST00000394611 RAB7BQ96AH8 199 aa7.82□□□□□ -1.16
RTN4-206ENST00000394611 NPTNQ9Y639 398 aa7.82□□□□□ -1.16
RTN4-206ENST00000394611 WSB1Q9Y6I7 421 aa7.82□□□□□ -1.16
RTN4-206ENST00000394611 GTF3C1Q12789 2109 aa7.82□□□□□ -1.16
RTN4-206ENST00000394611 A6NIZ1 184 aa7.81□□□□□ -1.16
RTN4-206ENST00000394611 SPINT1O43278 529 aa7.81□□□□□ -1.16
RTN4-206ENST00000394611 SERPINA7P05543 415 aa7.81□□□□□ -1.16
RTN4-206ENST00000394611 RPS2P15880 293 aaKnown RBP7.81□□□□□ -1.16
RTN4-206ENST00000394611 C5AR1P21730 350 aa7.81□□□□□ -1.16
RTN4-206ENST00000394611 CLDN17P56750 224 aa7.81□□□□□ -1.16
RTN4-206ENST00000394611 RAP1BP61224 184 aa7.81□□□□□ -1.16
RTN4-206ENST00000394611 DLK1P80370 383 aa7.81□□□□□ -1.16
RTN4-206ENST00000394611 KIR2DS3Q14952 304 aa7.81□□□□□ -1.16
RTN4-206ENST00000394611 SPNS3Q6ZMD2 512 aa7.81□□□□□ -1.16
RTN4-206ENST00000394611 ZNF813Q6ZN06 617 aa7.81□□□□□ -1.16
RTN4-206ENST00000394611 LANCL3Q6ZV70 420 aa7.81□□□□□ -1.16
RTN4-206ENST00000394611 OR56B1Q8NGI3 324 aa7.81□□□□□ -1.16
RTN4-206ENST00000394611 KCNG3Q8TAE7 436 aa7.81□□□□□ -1.16
RTN4-206ENST00000394611 C11orf40Q8WZ69 217 aa7.81□□□□□ -1.16
RTN4-206ENST00000394611 MR1Q95460 341 aa7.81□□□□□ -1.16
RTN4-206ENST00000394611 SAMD10Q9BYL1 202 aa7.81□□□□□ -1.16
RTN4-206ENST00000394611 COL4A2P08572 1712 aa7.81□□□□□ -1.16
RTN4-206ENST00000394611 SHISA7A6NL88 538 aa7.81□□□□□ -1.16
RTN4-206ENST00000394611 RAB38P57729 211 aa7.81□□□□□ -1.16
RTN4-206ENST00000394611 H3F3AP84243 136 aa7.81□□□□□ -1.16
RTN4-206ENST00000394611 OR8G1Q15617 311 aa7.81□□□□□ -1.16
RTN4-206ENST00000394611 PLAC9Q5JTB6 97 aa7.81□□□□□ -1.16
RTN4-206ENST00000394611 RTL6Q6ICC9 239 aa7.81□□□□□ -1.16
RTN4-206ENST00000394611 ST6GALNAC3Q8NDV1 305 aa7.81□□□□□ -1.16
RTN4-206ENST00000394611 PHYHIPQ92561 330 aa7.81□□□□□ -1.16
RTN4-206ENST00000394611 BORCS8Q96FH0 119 aa7.81□□□□□ -1.16
RTN4-206ENST00000394611 TMEM204Q9BSN7 226 aa7.81□□□□□ -1.16
RTN4-206ENST00000394611 PDE7BQ9NP56 450 aa7.81□□□□□ -1.16
RTN4-206ENST00000394611 INTS1Q8N201 2190 aaKnown RBP7.81□□□□□ -1.16
RTN4-206ENST00000394611 H3BQ15 152 aa7.81□□□□□ -1.16
RTN4-206ENST00000394611 PHYHO14832 338 aa7.81□□□□□ -1.16
RTN4-206ENST00000394611 CD33P20138 364 aa7.81□□□□□ -1.16
RTN4-206ENST00000394611 ZBTB25P24278 435 aa7.81□□□□□ -1.16
RTN4-206ENST00000394611 MSX1P28360 303 aa7.81□□□□□ -1.16
RTN4-206ENST00000394611 CHRNA7P36544 502 aa7.81□□□□□ -1.16
RTN4-206ENST00000394611 SLC35A1P78382 337 aa7.81□□□□□ -1.16
RTN4-206ENST00000394611 ZIC1Q15915 447 aa7.81□□□□□ -1.16
RTN4-206ENST00000394611 Q3ZCU0 254 aa7.81□□□□□ -1.16
RTN4-206ENST00000394611 LINC01590Q5TEZ4 76 aa7.81□□□□□ -1.16
RTN4-206ENST00000394611 PRSS54Q6PEW0 395 aa7.81□□□□□ -1.16
RTN4-206ENST00000394611 C5orf24Q7Z6I8 188 aa7.81□□□□□ -1.16
RTN4-206ENST00000394611 SLC25A42Q86VD7 318 aa7.81□□□□□ -1.16
RTN4-206ENST00000394611 OR5C1Q8NGR4 320 aa7.81□□□□□ -1.16
RTN4-206ENST00000394611 RBMXL1Q96E39 390 aaKnown RBP7.81□□□□□ -1.16
RTN4-206ENST00000394611 FSCN3Q9NQT6 498 aa7.81□□□□□ -1.16
RTN4-206ENST00000394611 MSTNO14793 375 aa7.81□□□□□ -1.16
RTN4-206ENST00000394611 ST8SIA3O43173 380 aa7.81□□□□□ -1.16
RTN4-206ENST00000394611 KLF4O43474 513 aa7.81□□□□□ -1.16
RTN4-206ENST00000394611 MLC1Q15049 377 aa7.81□□□□□ -1.16
RTN4-206ENST00000394611 IL34Q6ZMJ4 242 aa7.81□□□□□ -1.16
RTN4-206ENST00000394611 RAB39BQ96DA2 213 aa7.81□□□□□ -1.16
RTN4-206ENST00000394611 MESP1Q9BRJ9 268 aa7.81□□□□□ -1.16
RTN4-206ENST00000394611 KIAA1549LQ6ZVL6 1849 aa7.8□□□□□ -1.16
RTN4-206ENST00000394611 TRAV36DV7A0A075B6V5 113 aa7.8□□□□□ -1.16
RTN4-206ENST00000394611 SERPINE2P07093 398 aa7.8□□□□□ -1.16
RTN4-206ENST00000394611 PCK2Q16822 640 aa7.8□□□□□ -1.16
RTN4-206ENST00000394611 NSUN5P2Q63ZY6 315 aa7.8□□□□□ -1.16
RTN4-206ENST00000394611 C15orf54Q8N8G6 183 aa7.8□□□□□ -1.16
RTN4-206ENST00000394611 OR1K1Q8NGR3 316 aa7.8□□□□□ -1.16
RTN4-206ENST00000394611 OR14L1PQ8NHC6 308 aa7.8□□□□□ -1.16
RTN4-206ENST00000394611 STACQ99469 402 aa7.8□□□□□ -1.16
RTN4-206ENST00000394611 TIMM29Q9BSF4 260 aa7.8□□□□□ -1.16
RTN4-206ENST00000394611 SLC35B3Q9H1N7 401 aa7.8□□□□□ -1.16
RTN4-206ENST00000394611 BDP1A6H8Y1 2624 aa7.8□□□□□ -1.16
RTN4-206ENST00000394611 K7EQS6 105 aa7.8□□□□□ -1.16
RTN4-206ENST00000394611 SNAPC5O75971 98 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms