RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 MTRF1O75570 445 aaKnown RBP13.53□□□□□ -0.24
PTPRK-208ENST00000392449 DHRS3O75911 302 aa13.53□□□□□ -0.24
PTPRK-208ENST00000392449 CLPXO76031 633 aa13.53□□□□□ -0.24
PTPRK-208ENST00000392449 TSPAN15O95858 294 aa13.53□□□□□ -0.24
PTPRK-208ENST00000392449 HAAOP46952 286 aa13.53□□□□□ -0.24
PTPRK-208ENST00000392449 ESRRGP62508 458 aa13.53□□□□□ -0.24
PTPRK-208ENST00000392449 ODF4Q2M2E3 257 aa13.53□□□□□ -0.24
PTPRK-208ENST00000392449 PDLIM3Q53GG5 364 aaPredicted RBP13.53□□□□□ -0.24
PTPRK-208ENST00000392449 AADACL4Q5VUY2 407 aa13.53□□□□□ -0.24
PTPRK-208ENST00000392449 MKXQ8IYA7 352 aa13.53□□□□□ -0.24
PTPRK-208ENST00000392449 POC1AQ8NBT0 407 aa13.53□□□□□ -0.24
PTPRK-208ENST00000392449 OR4M1Q8NGD0 313 aa13.53□□□□□ -0.24
PTPRK-208ENST00000392449 OR5K1Q8NHB7 308 aa13.53□□□□□ -0.24
PTPRK-208ENST00000392449 ZNF671Q8TAW3 534 aa13.53□□□□□ -0.24
PTPRK-208ENST00000392449 DNAJC9Q8WXX5 260 aa13.53□□□□□ -0.24
PTPRK-208ENST00000392449 LRTOMTQ8WZ04 291 aa13.53□□□□□ -0.24
PTPRK-208ENST00000392449 NRBF2Q96F24 287 aa13.53□□□□□ -0.24
PTPRK-208ENST00000392449 SDSLQ96GA7 329 aa13.53□□□□□ -0.24
PTPRK-208ENST00000392449 AJUBAQ96IF1 538 aa13.53□□□□□ -0.24
PTPRK-208ENST00000392449 TBX5Q99593 518 aa13.53□□□□□ -0.24
PTPRK-208ENST00000392449 PPA2Q9H2U2 334 aa13.53□□□□□ -0.24
PTPRK-208ENST00000392449 MRM2Q9UI43 246 aaKnown RBP13.53□□□□□ -0.24
PTPRK-208ENST00000392449 SLC22A13Q9Y226 551 aa13.53□□□□□ -0.24
PTPRK-208ENST00000392449 TMEM14AQ9Y6G1 99 aa13.53□□□□□ -0.24
PTPRK-208ENST00000392449 PRKDCP78527 4128 aaKnown RBP13.52□□□□□ -0.24
PTPRK-208ENST00000392449 A0A1B0GTI1 187 aa13.52□□□□□ -0.25
PTPRK-208ENST00000392449 MEX3AA1L020 520 aaKnown RBP13.52□□□□□ -0.25
PTPRK-208ENST00000392449 H3BUX3 64 aa13.52□□□□□ -0.25
PTPRK-208ENST00000392449 APOL3O95236 402 aa13.52□□□□□ -0.25
PTPRK-208ENST00000392449 EFNB1P98172 346 aa13.52□□□□□ -0.25
PTPRK-208ENST00000392449 EGR3Q06889 387 aa13.52□□□□□ -0.25
PTPRK-208ENST00000392449 ZNF684Q5T5D7 378 aa13.52□□□□□ -0.25
PTPRK-208ENST00000392449 BCL2L15Q5TBC7 163 aa13.52□□□□□ -0.25
PTPRK-208ENST00000392449 SLX4IPQ5VYV7 408 aa13.52□□□□□ -0.25
PTPRK-208ENST00000392449 NCR3LG1Q68D85 454 aa13.52□□□□□ -0.25
PTPRK-208ENST00000392449 C12orf73Q69YU5 71 aa13.52□□□□□ -0.25
PTPRK-208ENST00000392449 C1orf122Q6ZSJ8 110 aa13.52□□□□□ -0.25
PTPRK-208ENST00000392449 ASRGL1Q7L266 308 aa13.52□□□□□ -0.25
PTPRK-208ENST00000392449 TCF7L1Q9HCS4 588 aa13.52□□□□□ -0.25
PTPRK-208ENST00000392449 OR52A1Q9UKL2 312 aa13.52□□□□□ -0.25
PTPRK-208ENST00000392449 SIGLEC9Q9Y336 463 aa13.52□□□□□ -0.25
PTPRK-208ENST00000392449 R4GMQ9 66 aa13.52□□□□□ -0.25
PTPRK-208ENST00000392449 PQLC2LA1A4F0 135 aa13.51□□□□□ -0.25
PTPRK-208ENST00000392449 ZAR1LA6NP61 321 aa13.51□□□□□ -0.25
PTPRK-208ENST00000392449 M0QZ24 198 aa13.51□□□□□ -0.25
PTPRK-208ENST00000392449 RPP14O95059 124 aaKnown RBP13.51□□□□□ -0.25
PTPRK-208ENST00000392449 PGA5P0DJD9 388 aa13.51□□□□□ -0.25
PTPRK-208ENST00000392449 ATP6V1B1P15313 513 aa13.51□□□□□ -0.25
PTPRK-208ENST00000392449 CCL3L1P16619 93 aa13.51□□□□□ -0.25
PTPRK-208ENST00000392449 BLMHQ13867 455 aa13.51□□□□□ -0.25
PTPRK-208ENST00000392449 LY6EQ16553 131 aa13.51□□□□□ -0.25
PTPRK-208ENST00000392449 ZBTB37Q5TC79 503 aa13.51□□□□□ -0.25
PTPRK-208ENST00000392449 TMEM42Q69YG0 159 aa13.51□□□□□ -0.25
PTPRK-208ENST00000392449 AMIGO2Q86SJ2 522 aa13.51□□□□□ -0.25
PTPRK-208ENST00000392449 ANGPTL5Q86XS5 388 aa13.51□□□□□ -0.25
PTPRK-208ENST00000392449 ELMOD2Q8IZ81 293 aa13.51□□□□□ -0.25
PTPRK-208ENST00000392449 OR51G2Q8NGK0 314 aa13.51□□□□□ -0.25
PTPRK-208ENST00000392449 OR14K1Q8NGZ2 314 aa13.51□□□□□ -0.25
PTPRK-208ENST00000392449 PPP1R35Q8TAP8 253 aa13.51□□□□□ -0.25
PTPRK-208ENST00000392449 TRMT10AQ8TBZ6 339 aaKnown RBP13.51□□□□□ -0.25
PTPRK-208ENST00000392449 TMEM163Q8TC26 289 aa13.51□□□□□ -0.25
PTPRK-208ENST00000392449 C16orf95Q9H693 158 aa13.51□□□□□ -0.25
PTPRK-208ENST00000392449 OR14J1Q9UGF5 321 aa13.51□□□□□ -0.25
PTPRK-208ENST00000392449 V9GYS6 101 aa13.51□□□□□ -0.25
PTPRK-208ENST00000392449 TRBV23-1A0A0A0MS06 115 aa13.5□□□□□ -0.25
PTPRK-208ENST00000392449 J3QT63 122 aa13.5□□□□□ -0.25
PTPRK-208ENST00000392449 TIMM23O14925 209 aa13.5□□□□□ -0.25
PTPRK-208ENST00000392449 PRDX2P32119 198 aa13.5□□□□□ -0.25
PTPRK-208ENST00000392449 POLR2IP36954 125 aaKnown RBP13.5□□□□□ -0.25
PTPRK-208ENST00000392449 BMXP51813 675 aa13.5□□□□□ -0.25
PTPRK-208ENST00000392449 ACSM1Q08AH1 577 aa13.5□□□□□ -0.25
PTPRK-208ENST00000392449 ATP6AP1Q15904 470 aa13.5□□□□□ -0.25
PTPRK-208ENST00000392449 SMIM21Q3B7S5 101 aa13.5□□□□□ -0.25
PTPRK-208ENST00000392449 CLVS2Q5SYC1 327 aa13.5□□□□□ -0.25
PTPRK-208ENST00000392449 NXNL2Q5VZ03 156 aa13.5□□□□□ -0.25
PTPRK-208ENST00000392449 TMEM200BQ69YZ2 307 aa13.5□□□□□ -0.25
PTPRK-208ENST00000392449 SLC35E4Q6ICL7 350 aa13.5□□□□□ -0.25
PTPRK-208ENST00000392449 CALHM1Q8IU99 346 aa13.5□□□□□ -0.25
PTPRK-208ENST00000392449 BEND2Q8NDZ0 799 aa13.5□□□□□ -0.25
PTPRK-208ENST00000392449 SSX3Q99909 188 aa13.5□□□□□ -0.25
PTPRK-208ENST00000392449 MMP27Q9H306 513 aa13.5□□□□□ -0.25
PTPRK-208ENST00000392449 CLN6Q9NWW5 311 aa13.5□□□□□ -0.25
PTPRK-208ENST00000392449 RASL12Q9NYN1 266 aa13.5□□□□□ -0.25
PTPRK-208ENST00000392449 ANKRD61A6NGH8 418 aa13.49□□□□□ -0.25
PTPRK-208ENST00000392449 SLC22A31A6NKX4 558 aa13.49□□□□□ -0.25
PTPRK-208ENST00000392449 ZNF670-ZNF695F2Z2N8 137 aa13.49□□□□□ -0.25
PTPRK-208ENST00000392449 G3V2T6 193 aa13.49□□□□□ -0.25
PTPRK-208ENST00000392449 TSPAN9O75954 239 aa13.49□□□□□ -0.25
PTPRK-208ENST00000392449 INMTO95050 263 aa13.49□□□□□ -0.25
PTPRK-208ENST00000392449 NXPH2O95156 264 aa13.49□□□□□ -0.25
PTPRK-208ENST00000392449 PIPP12273 146 aaPredicted RBP13.49□□□□□ -0.25
PTPRK-208ENST00000392449 COX7A1P24310 79 aa13.49□□□□□ -0.25
PTPRK-208ENST00000392449 RPL31P62899 125 aaKnown RBP13.49□□□□□ -0.25
PTPRK-208ENST00000392449 ZNF273Q14593 569 aa13.49□□□□□ -0.25
PTPRK-208ENST00000392449 KDM4DQ6B0I6 523 aa13.49□□□□□ -0.25
PTPRK-208ENST00000392449 C11orf42Q8N5U0 333 aa13.49□□□□□ -0.25
PTPRK-208ENST00000392449 OR5D13Q8NGL4 314 aa13.49□□□□□ -0.25
PTPRK-208ENST00000392449 NRIP2Q9BQI9 281 aa13.49□□□□□ -0.25
PTPRK-208ENST00000392449 PRRG3Q9BZD7 231 aa13.49□□□□□ -0.25
PTPRK-208ENST00000392449 H2AFY2Q9P0M6 372 aaPredicted RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms