RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 ACKR3P25106 362 aa9.1□□□□□ -0.95
POLR2J3-201ENST00000379340 CD34P28906 385 aa9.1□□□□□ -0.95
POLR2J3-201ENST00000379340 BLVRBP30043 206 aaPredicted RBP9.1□□□□□ -0.95
POLR2J3-201ENST00000379340 ARR3P36575 388 aa9.1□□□□□ -0.95
POLR2J3-201ENST00000379340 ARG2P78540 354 aa9.1□□□□□ -0.95
POLR2J3-201ENST00000379340 FAM3AP98173 230 aa9.1□□□□□ -0.95
POLR2J3-201ENST00000379340 FGL1Q08830 312 aa9.1□□□□□ -0.95
POLR2J3-201ENST00000379340 DHRS2Q13268 280 aa9.1□□□□□ -0.95
POLR2J3-201ENST00000379340 NKPD1Q17RQ9 610 aa9.1□□□□□ -0.95
POLR2J3-201ENST00000379340 ZNF766Q5HY98 468 aa9.1□□□□□ -0.95
POLR2J3-201ENST00000379340 NSUN5P2Q63ZY6 315 aa9.1□□□□□ -0.95
POLR2J3-201ENST00000379340 OR52W1Q6IF63 320 aa9.1□□□□□ -0.95
POLR2J3-201ENST00000379340 LIN54Q6MZP7 749 aa9.1□□□□□ -0.95
POLR2J3-201ENST00000379340 COLCA1Q6ZS62 124 aa9.1□□□□□ -0.95
POLR2J3-201ENST00000379340 PXT1Q8NFP0 134 aa9.1□□□□□ -0.95
POLR2J3-201ENST00000379340 OR5D18Q8NGL1 313 aa9.1□□□□□ -0.95
POLR2J3-201ENST00000379340 OR5H2Q8NGV7 314 aa9.1□□□□□ -0.95
POLR2J3-201ENST00000379340 OR2AE1Q8NHA4 323 aa9.1□□□□□ -0.95
POLR2J3-201ENST00000379340 MRPS24Q96EL2 167 aaKnown RBP9.1□□□□□ -0.95
POLR2J3-201ENST00000379340 Q96M66 194 aa9.1□□□□□ -0.95
POLR2J3-201ENST00000379340 OPA3Q9H6K4 179 aa9.1□□□□□ -0.95
POLR2J3-201ENST00000379340 HEXA-AS1Q9H8Q6 139 aa9.1□□□□□ -0.95
POLR2J3-201ENST00000379340 CALHM2Q9HA72 323 aa9.1□□□□□ -0.95
POLR2J3-201ENST00000379340 IL36GQ9NZH8 169 aa9.1□□□□□ -0.95
POLR2J3-201ENST00000379340 HSF4Q9ULV5 492 aa9.1□□□□□ -0.95
POLR2J3-201ENST00000379340 ZNF175Q9Y473 711 aa9.1□□□□□ -0.95
POLR2J3-201ENST00000379340 FLNCQ14315 2725 aa9.1□□□□□ -0.95
POLR2J3-201ENST00000379340 A0A1W2PP11 408 aa9.09□□□□□ -0.95
POLR2J3-201ENST00000379340 TUBAL3A6NHL2 446 aa9.09□□□□□ -0.95
POLR2J3-201ENST00000379340 TOXO94900 526 aa9.09□□□□□ -0.95
POLR2J3-201ENST00000379340 CD8AP01732 235 aa9.09□□□□□ -0.95
POLR2J3-201ENST00000379340 HLA-AP01891 365 aaKnown RBP9.09□□□□□ -0.95
POLR2J3-201ENST00000379340 CSTBP04080 98 aaKnown RBP9.09□□□□□ -0.95
POLR2J3-201ENST00000379340 SERPINA5P05154 406 aa9.09□□□□□ -0.95
POLR2J3-201ENST00000379340 CSN2P05814 226 aa9.09□□□□□ -0.95
POLR2J3-201ENST00000379340 PATE4P0C8F1 98 aa9.09□□□□□ -0.95
POLR2J3-201ENST00000379340 TMEM225BP0DP42 221 aa9.09□□□□□ -0.95
POLR2J3-201ENST00000379340 AMY2BP19961 511 aa9.09□□□□□ -0.95
POLR2J3-201ENST00000379340 ECI1P42126 302 aa9.09□□□□□ -0.95
POLR2J3-201ENST00000379340 RSU1Q15404 277 aa9.09□□□□□ -0.95
POLR2J3-201ENST00000379340 MICBQ29980 383 aa9.09□□□□□ -0.95
POLR2J3-201ENST00000379340 C1QL2Q7Z5L3 287 aa9.09□□□□□ -0.95
POLR2J3-201ENST00000379340 ZNF680Q8NEM1 530 aa9.09□□□□□ -0.95
POLR2J3-201ENST00000379340 OR5M8Q8NGP6 311 aa9.09□□□□□ -0.95
POLR2J3-201ENST00000379340 TERB2Q8NHR7 220 aa9.09□□□□□ -0.95
POLR2J3-201ENST00000379340 FGFBP3Q8TAT2 258 aa9.09□□□□□ -0.95
POLR2J3-201ENST00000379340 FNDC9Q8TBE3 224 aa9.09□□□□□ -0.95
POLR2J3-201ENST00000379340 FBXW5Q969U6 566 aa9.09□□□□□ -0.95
POLR2J3-201ENST00000379340 PHB2Q99623 299 aa9.09□□□□□ -0.95
POLR2J3-201ENST00000379340 LDAHQ9H6V9 325 aa9.09□□□□□ -0.95
POLR2J3-201ENST00000379340 ELL3Q9HB65 397 aaPredicted RBP9.09□□□□□ -0.95
POLR2J3-201ENST00000379340 EDARQ9UNE0 448 aa9.09□□□□□ -0.95
POLR2J3-201ENST00000379340 NOP16Q9Y3C1 178 aaKnown RBP9.09□□□□□ -0.95
POLR2J3-201ENST00000379340 TRGV5A0A0B4J1U4 118 aa9.08□□□□□ -0.96
POLR2J3-201ENST00000379340 RFPL4AA6NLU0 287 aa9.08□□□□□ -0.96
POLR2J3-201ENST00000379340 MCRIP1C9JLW8 97 aa9.08□□□□□ -0.96
POLR2J3-201ENST00000379340 RFPL4AL1F8VTS6 287 aa9.08□□□□□ -0.96
POLR2J3-201ENST00000379340 RAD51DO75771 328 aa9.08□□□□□ -0.96
POLR2J3-201ENST00000379340 PMP2P02689 132 aa9.08□□□□□ -0.96
POLR2J3-201ENST00000379340 FPR2P25090 351 aa9.08□□□□□ -0.96
POLR2J3-201ENST00000379340 AGTR1P30556 359 aa9.08□□□□□ -0.96
POLR2J3-201ENST00000379340 OR3A3P47888 321 aa9.08□□□□□ -0.96
POLR2J3-201ENST00000379340 OR3A2P47893 321 aa9.08□□□□□ -0.96
POLR2J3-201ENST00000379340 H2BFSP57053 126 aa9.08□□□□□ -0.96
POLR2J3-201ENST00000379340 SEC61A1P61619 476 aaKnown RBP9.08□□□□□ -0.96
POLR2J3-201ENST00000379340 OPCMLQ14982 345 aa9.08□□□□□ -0.96
POLR2J3-201ENST00000379340 SURF2Q15527 256 aaPredicted RBP9.08□□□□□ -0.96
POLR2J3-201ENST00000379340 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.08□□□□□ -0.96
POLR2J3-201ENST00000379340 ZSCAN4Q8NAM6 433 aaPredicted RBP9.08□□□□□ -0.96
POLR2J3-201ENST00000379340 TMEM185AQ8NFB2 350 aa9.08□□□□□ -0.96
POLR2J3-201ENST00000379340 MITD1Q8WV92 249 aa9.08□□□□□ -0.96
POLR2J3-201ENST00000379340 NANOS1Q8WY41 292 aaKnown RBP9.08□□□□□ -0.96
POLR2J3-201ENST00000379340 ELMOD3Q96FG2 381 aa9.08□□□□□ -0.96
POLR2J3-201ENST00000379340 ZNF552Q9H707 407 aaPredicted RBP9.08□□□□□ -0.96
POLR2J3-201ENST00000379340 ZDHHC11Q9H8X9 412 aa9.08□□□□□ -0.96
POLR2J3-201ENST00000379340 UBQLN2Q9UHD9 624 aa9.08□□□□□ -0.96
POLR2J3-201ENST00000379340 MAB21L2Q9Y586 359 aa9.08□□□□□ -0.96
POLR2J3-201ENST00000379340 A0A0B4J2A0 478 aa9.07□□□□□ -0.96
POLR2J3-201ENST00000379340 FAM230AA0A1W2PPH8 454 aa9.07□□□□□ -0.96
POLR2J3-201ENST00000379340 C9orf170A2RU37 121 aa9.07□□□□□ -0.96
POLR2J3-201ENST00000379340 A6NL46 340 aa9.07□□□□□ -0.96
POLR2J3-201ENST00000379340 HTR3BO95264 441 aa9.07□□□□□ -0.96
POLR2J3-201ENST00000379340 SIX6O95475 246 aa9.07□□□□□ -0.96
POLR2J3-201ENST00000379340 DUS4LO95620 317 aaKnown RBP9.07□□□□□ -0.96
POLR2J3-201ENST00000379340 EDN3P14138 238 aa9.07□□□□□ -0.96
POLR2J3-201ENST00000379340 PMELP40967 661 aa9.07□□□□□ -0.96
POLR2J3-201ENST00000379340 IL13RA1P78552 427 aa9.07□□□□□ -0.96
POLR2J3-201ENST00000379340 ZNF92Q03936 586 aa9.07□□□□□ -0.96
POLR2J3-201ENST00000379340 PLP2Q04941 152 aa9.07□□□□□ -0.96
POLR2J3-201ENST00000379340 MALLQ13021 153 aa9.07□□□□□ -0.96
POLR2J3-201ENST00000379340 GRK1Q15835 563 aa9.07□□□□□ -0.96
POLR2J3-201ENST00000379340 C2orf68Q2NKX9 166 aa9.07□□□□□ -0.96
POLR2J3-201ENST00000379340 PEG10Q86TG7 708 aaKnown RBP9.07□□□□□ -0.96
POLR2J3-201ENST00000379340 CPEB3Q8NE35 698 aaKnown RBP9.07□□□□□ -0.96
POLR2J3-201ENST00000379340 CSNK2A3Q8NEV1 391 aa9.07□□□□□ -0.96
POLR2J3-201ENST00000379340 OR5AP2Q8NGF4 316 aa9.07□□□□□ -0.96
POLR2J3-201ENST00000379340 OR10K1Q8NGX5 313 aa9.07□□□□□ -0.96
POLR2J3-201ENST00000379340 APOBEC3DQ96AK3 386 aaPredicted RBP9.07□□□□□ -0.96
POLR2J3-201ENST00000379340 MRGPRFQ96AM1 343 aa9.07□□□□□ -0.96
POLR2J3-201ENST00000379340 WDYHV1Q96HA8 205 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms