RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 OR5M9Q8NGP3 310 aa13.51□□□□□ -0.25
CCDC40-202ENST00000374876 MARVELD3Q96A59 401 aa13.51□□□□□ -0.25
CCDC40-202ENST00000374876 FAHD2AQ96GK7 314 aa13.51□□□□□ -0.25
CCDC40-202ENST00000374876 ARHGAP5-AS1Q96IT6 56 aa13.51□□□□□ -0.25
CCDC40-202ENST00000374876 S100A13Q99584 98 aa13.51□□□□□ -0.25
CCDC40-202ENST00000374876 PHB2Q99623 299 aa13.51□□□□□ -0.25
CCDC40-202ENST00000374876 CHST5Q9GZS9 411 aa13.51□□□□□ -0.25
CCDC40-202ENST00000374876 FLVCR1Q9Y5Y0 555 aa13.51□□□□□ -0.25
CCDC40-202ENST00000374876 POLEQ07864 2286 aa13.5□□□□□ -0.25
CCDC40-202ENST00000374876 OR5H14A6NHG9 310 aa13.5□□□□□ -0.25
CCDC40-202ENST00000374876 I3L521 148 aa13.5□□□□□ -0.25
CCDC40-202ENST00000374876 IL2RAP01589 272 aa13.5□□□□□ -0.25
CCDC40-202ENST00000374876 CD8AP01732 235 aa13.5□□□□□ -0.25
CCDC40-202ENST00000374876 AKR1C4P17516 323 aa13.5□□□□□ -0.25
CCDC40-202ENST00000374876 VAMP1P23763 118 aa13.5□□□□□ -0.25
CCDC40-202ENST00000374876 AGTR1P30556 359 aa13.5□□□□□ -0.25
CCDC40-202ENST00000374876 STARP49675 285 aa13.5□□□□□ -0.25
CCDC40-202ENST00000374876 AP2S1P53680 142 aaPredicted RBP13.5□□□□□ -0.25
CCDC40-202ENST00000374876 RPS27AP62979 156 aaKnown RBP13.5□□□□□ -0.25
CCDC40-202ENST00000374876 ACTBL2Q562R1 376 aa13.5□□□□□ -0.25
CCDC40-202ENST00000374876 CCDC54Q8NEL0 328 aa13.5□□□□□ -0.25
CCDC40-202ENST00000374876 OR52H1Q8NGJ2 320 aa13.5□□□□□ -0.25
CCDC40-202ENST00000374876 CRLF2Q9HC73 371 aa13.5□□□□□ -0.25
CCDC40-202ENST00000374876 COMMD9Q9P000 198 aa13.5□□□□□ -0.25
CCDC40-202ENST00000374876 TINAGQ9UJW2 476 aa13.5□□□□□ -0.25
CCDC40-202ENST00000374876 TRAV14DV4A0A0A6YYC5 116 aa13.49□□□□□ -0.25
CCDC40-202ENST00000374876 MFNGO00587 321 aa13.49□□□□□ -0.25
CCDC40-202ENST00000374876 SGCEO43556 437 aa13.49□□□□□ -0.25
CCDC40-202ENST00000374876 CXCL13O43927 109 aa13.49□□□□□ -0.25
CCDC40-202ENST00000374876 B3GALNT1O75752 331 aa13.49□□□□□ -0.25
CCDC40-202ENST00000374876 FCGR2AP12318 317 aa13.49□□□□□ -0.25
CCDC40-202ENST00000374876 NAT1P18440 290 aa13.49□□□□□ -0.25
CCDC40-202ENST00000374876 RBPJQ06330 500 aa13.49□□□□□ -0.25
CCDC40-202ENST00000374876 RAB35Q15286 201 aa13.49□□□□□ -0.25
CCDC40-202ENST00000374876 C3AR1Q16581 482 aa13.49□□□□□ -0.25
CCDC40-202ENST00000374876 MICBQ29980 383 aa13.49□□□□□ -0.25
CCDC40-202ENST00000374876 ZNF546Q86UE3 836 aa13.49□□□□□ -0.25
CCDC40-202ENST00000374876 GPR137CQ8N3F9 429 aa13.49□□□□□ -0.25
CCDC40-202ENST00000374876 MITD1Q8WV92 249 aa13.49□□□□□ -0.25
CCDC40-202ENST00000374876 C10orf35Q96D05 121 aa13.49□□□□□ -0.25
CCDC40-202ENST00000374876 ZNF224Q9NZL3 707 aa13.49□□□□□ -0.25
CCDC40-202ENST00000374876 ANAPC10Q9UM13 185 aa13.49□□□□□ -0.25
CCDC40-202ENST00000374876 ZNF835Q9Y2P0 537 aa13.49□□□□□ -0.25
CCDC40-202ENST00000374876 MRPS18CQ9Y3D5 142 aaKnown RBP13.49□□□□□ -0.25
CCDC40-202ENST00000374876 TRGV8A0A0C4DH27 118 aa13.49□□□□□ -0.25
CCDC40-202ENST00000374876 AQP7O14520 342 aa13.49□□□□□ -0.25
CCDC40-202ENST00000374876 CCSO14618 274 aa13.49□□□□□ -0.25
CCDC40-202ENST00000374876 RAD51DO75771 328 aa13.49□□□□□ -0.25
CCDC40-202ENST00000374876 MGMTP16455 207 aa13.49□□□□□ -0.25
CCDC40-202ENST00000374876 ALDH3B1P43353 468 aa13.49□□□□□ -0.25
CCDC40-202ENST00000374876 CBX5P45973 191 aa13.49□□□□□ -0.25
CCDC40-202ENST00000374876 GFRA1P56159 465 aa13.49□□□□□ -0.25
CCDC40-202ENST00000374876 SRSF4Q08170 494 aaKnown RBP13.49□□□□□ -0.25
CCDC40-202ENST00000374876 NCOA6Q14686 2063 aaPredicted RBP13.49□□□□□ -0.25
CCDC40-202ENST00000374876 SNAI3Q3KNW1 292 aa13.49□□□□□ -0.25
CCDC40-202ENST00000374876 VAX1Q5SQQ9 334 aa13.49□□□□□ -0.25
CCDC40-202ENST00000374876 ALKAL2Q6UX46 152 aa13.49□□□□□ -0.25
CCDC40-202ENST00000374876 AAED1Q7RTV5 226 aa13.49□□□□□ -0.25
CCDC40-202ENST00000374876 C1QL2Q7Z5L3 287 aa13.49□□□□□ -0.25
CCDC40-202ENST00000374876 HOGA1Q86XE5 327 aa13.49□□□□□ -0.25
CCDC40-202ENST00000374876 DOLPP1Q86YN1 238 aa13.49□□□□□ -0.25
CCDC40-202ENST00000374876 FAM89BQ8N5H3 189 aa13.49□□□□□ -0.25
CCDC40-202ENST00000374876 ADAD2Q8NCV1 583 aaKnown RBP13.49□□□□□ -0.25
CCDC40-202ENST00000374876 OR2V1Q8NHB1 315 aa13.49□□□□□ -0.25
CCDC40-202ENST00000374876 TERB2Q8NHR7 220 aa13.49□□□□□ -0.25
CCDC40-202ENST00000374876 MARCH1Q8TCQ1 289 aa13.49□□□□□ -0.25
CCDC40-202ENST00000374876 SCARB1Q8WTV0 552 aa13.49□□□□□ -0.25
CCDC40-202ENST00000374876 CASTOR1Q8WTX7 329 aa13.49□□□□□ -0.25
CCDC40-202ENST00000374876 ROBO4Q8WZ75 1007 aa13.49□□□□□ -0.25
CCDC40-202ENST00000374876 ST8SIA4Q92187 359 aa13.49□□□□□ -0.25
CCDC40-202ENST00000374876 OCSTAMPQ9BR26 566 aa13.49□□□□□ -0.25
CCDC40-202ENST00000374876 ELL3Q9HB65 397 aaPredicted RBP13.49□□□□□ -0.25
CCDC40-202ENST00000374876 ZNF716A6NP11 495 aa13.48□□□□□ -0.25
CCDC40-202ENST00000374876 FAM25EA8MYX2 175 aa13.48□□□□□ -0.25
CCDC40-202ENST00000374876 CST2P09228 141 aa13.48□□□□□ -0.25
CCDC40-202ENST00000374876 NAT2P11245 290 aa13.48□□□□□ -0.25
CCDC40-202ENST00000374876 POU3F2P20265 443 aaPredicted RBP13.48□□□□□ -0.25
CCDC40-202ENST00000374876 SERPINA2P20848 420 aa13.48□□□□□ -0.25
CCDC40-202ENST00000374876 TAS2R31P59538 309 aa13.48□□□□□ -0.25
CCDC40-202ENST00000374876 AANATQ16613 207 aa13.48□□□□□ -0.25
CCDC40-202ENST00000374876 DRAM2Q6UX65 266 aa13.48□□□□□ -0.25
CCDC40-202ENST00000374876 Q6ZSR3 168 aa13.48□□□□□ -0.25
CCDC40-202ENST00000374876 ARRDC1Q8N5I2 433 aa13.48□□□□□ -0.25
CCDC40-202ENST00000374876 OR5H2Q8NGV7 314 aa13.48□□□□□ -0.25
CCDC40-202ENST00000374876 OR10D3Q8NH80 312 aa13.48□□□□□ -0.25
CCDC40-202ENST00000374876 FAM57AQ8TBR7 257 aa13.48□□□□□ -0.25
CCDC40-202ENST00000374876 PIGTQ969N2 578 aa13.48□□□□□ -0.25
CCDC40-202ENST00000374876 SGK3Q96BR1 496 aa13.48□□□□□ -0.25
CCDC40-202ENST00000374876 SARAFQ96BY9 339 aa13.48□□□□□ -0.25
CCDC40-202ENST00000374876 SEC22AQ96IW7 307 aa13.48□□□□□ -0.25
CCDC40-202ENST00000374876 TMEM38BQ9NVV0 291 aa13.48□□□□□ -0.25
CCDC40-202ENST00000374876 RDH8Q9NYR8 311 aa13.48□□□□□ -0.25
CCDC40-202ENST00000374876 HLA-GP17693 338 aa13.47□□□□□ -0.25
CCDC40-202ENST00000374876 AMY2BP19961 511 aa13.47□□□□□ -0.25
CCDC40-202ENST00000374876 BLVRBP30043 206 aaPredicted RBP13.47□□□□□ -0.25
CCDC40-202ENST00000374876 NTF4P34130 210 aa13.47□□□□□ -0.25
CCDC40-202ENST00000374876 SRYQ05066 204 aa13.47□□□□□ -0.25
CCDC40-202ENST00000374876 SCRN3Q0VDG4 424 aa13.47□□□□□ -0.25
CCDC40-202ENST00000374876 C1QTNF12Q5T7M4 302 aa13.47□□□□□ -0.25
CCDC40-202ENST00000374876 ZNF585AQ6P3V2 769 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms