RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 SHPKQ9UHJ6 478 aa12.19□□□□□ -0.46
USF1-202ENST00000368020 PTPRQQ9UMZ3 2332 aa12.19□□□□□ -0.46
USF1-202ENST00000368020 AUP1Q9Y679 476 aa12.19□□□□□ -0.46
USF1-202ENST00000368020 OR2AT4A6NND4 320 aa12.18□□□□□ -0.46
USF1-202ENST00000368020 ARPC5O15511 151 aa12.18□□□□□ -0.46
USF1-202ENST00000368020 RRP8O43159 456 aaKnown RBP12.18□□□□□ -0.46
USF1-202ENST00000368020 ACKR3P25106 362 aa12.18□□□□□ -0.46
USF1-202ENST00000368020 MEOX1P50221 254 aa12.18□□□□□ -0.46
USF1-202ENST00000368020 PPIAP62937 165 aaKnown RBP12.18□□□□□ -0.46
USF1-202ENST00000368020 SRYQ05066 204 aa12.18□□□□□ -0.46
USF1-202ENST00000368020 PPP1R1AQ13522 171 aa12.18□□□□□ -0.46
USF1-202ENST00000368020 ZNF345Q14585 488 aa12.18□□□□□ -0.46
USF1-202ENST00000368020 SLC10A1Q14973 349 aa12.18□□□□□ -0.46
USF1-202ENST00000368020 PABPC1L2AQ5JQF8 200 aa12.18□□□□□ -0.46
USF1-202ENST00000368020 LY6G6FQ5SQ64 297 aa12.18□□□□□ -0.46
USF1-202ENST00000368020 RNF144BQ7Z419 303 aa12.18□□□□□ -0.46
USF1-202ENST00000368020 OR5AP2Q8NGF4 316 aa12.18□□□□□ -0.46
USF1-202ENST00000368020 OR2AE1Q8NHA4 323 aa12.18□□□□□ -0.46
USF1-202ENST00000368020 MARVELD3Q96A59 401 aa12.18□□□□□ -0.46
USF1-202ENST00000368020 GSX2Q9BZM3 304 aa12.18□□□□□ -0.46
USF1-202ENST00000368020 PLEKHJ1Q9NW61 149 aa12.18□□□□□ -0.46
USF1-202ENST00000368020 KIF25Q9UIL4 384 aa12.18□□□□□ -0.46
USF1-202ENST00000368020 CHD8Q9HCK8 2581 aa12.18□□□□□ -0.46
USF1-202ENST00000368020 A0A1W2PP11 408 aa12.17□□□□□ -0.46
USF1-202ENST00000368020 FAM166BA8MTA8 275 aa12.17□□□□□ -0.46
USF1-202ENST00000368020 TPD52L2O43399 206 aaKnown RBP12.17□□□□□ -0.46
USF1-202ENST00000368020 SIX6O95475 246 aa12.17□□□□□ -0.46
USF1-202ENST00000368020 SERPINA5P05154 406 aa12.17□□□□□ -0.46
USF1-202ENST00000368020 SLC25A4P12235 298 aa12.17□□□□□ -0.46
USF1-202ENST00000368020 DTYMKP23919 212 aa12.17□□□□□ -0.46
USF1-202ENST00000368020 SNU13P55769 128 aaKnown RBP12.17□□□□□ -0.46
USF1-202ENST00000368020 FAM3AP98173 230 aa12.17□□□□□ -0.46
USF1-202ENST00000368020 C2orf68Q2NKX9 166 aa12.17□□□□□ -0.46
USF1-202ENST00000368020 CHRFAM7AQ494W8 412 aa12.17□□□□□ -0.46
USF1-202ENST00000368020 ATP1A1-AS1Q5TC04 95 aa12.17□□□□□ -0.46
USF1-202ENST00000368020 DCAF12L2Q5VW00 463 aa12.17□□□□□ -0.46
USF1-202ENST00000368020 COLCA1Q6ZS62 124 aa12.17□□□□□ -0.46
USF1-202ENST00000368020 TMUB2Q71RG4 321 aa12.17□□□□□ -0.46
USF1-202ENST00000368020 C1QL2Q7Z5L3 287 aa12.17□□□□□ -0.46
USF1-202ENST00000368020 PEG10Q86TG7 708 aaKnown RBP12.17□□□□□ -0.46
USF1-202ENST00000368020 SPACA3Q8IXA5 215 aa12.17□□□□□ -0.46
USF1-202ENST00000368020 ZSCAN4Q8NAM6 433 aaPredicted RBP12.17□□□□□ -0.46
USF1-202ENST00000368020 CSNK2A3Q8NEV1 391 aa12.17□□□□□ -0.46
USF1-202ENST00000368020 MRGPRFQ96AM1 343 aa12.17□□□□□ -0.46
USF1-202ENST00000368020 SLC6A15Q9H2J7 730 aa12.17□□□□□ -0.46
USF1-202ENST00000368020 GPR132Q9UNW8 380 aa12.17□□□□□ -0.46
USF1-202ENST00000368020 OR5H14A6NHG9 310 aa12.17□□□□□ -0.46
USF1-202ENST00000368020 PRSS44E7EML9 344 aa12.17□□□□□ -0.46
USF1-202ENST00000368020 B3GALNT1O75752 331 aa12.17□□□□□ -0.46
USF1-202ENST00000368020 RAD51DO75771 328 aa12.17□□□□□ -0.46
USF1-202ENST00000368020 OR2F2O95006 317 aa12.17□□□□□ -0.46
USF1-202ENST00000368020 VAMP1P23763 118 aa12.17□□□□□ -0.46
USF1-202ENST00000368020 PMELP40967 661 aa12.17□□□□□ -0.46
USF1-202ENST00000368020 ARF1P84077 181 aaKnown RBP12.17□□□□□ -0.46
USF1-202ENST00000368020 SORDQ00796 357 aa12.17□□□□□ -0.46
USF1-202ENST00000368020 HGFACQ04756 655 aa12.17□□□□□ -0.46
USF1-202ENST00000368020 MALLQ13021 153 aa12.17□□□□□ -0.46
USF1-202ENST00000368020 OR2F1Q13607 317 aa12.17□□□□□ -0.46
USF1-202ENST00000368020 PLEKHN1Q494U1 663 aaPredicted RBP12.17□□□□□ -0.46
USF1-202ENST00000368020 LHFPL1Q86WI0 220 aa12.17□□□□□ -0.46
USF1-202ENST00000368020 MFFQ9GZY8 342 aa12.17□□□□□ -0.46
USF1-202ENST00000368020 ARL6Q9H0F7 186 aa12.17□□□□□ -0.46
USF1-202ENST00000368020 PPA2Q9H2U2 334 aa12.17□□□□□ -0.46
USF1-202ENST00000368020 SLC7A10Q9NS82 523 aa12.17□□□□□ -0.46
USF1-202ENST00000368020 CACNA1GO43497 2377 aa12.16□□□□□ -0.46
USF1-202ENST00000368020 LOC100509620A0A075B734 347 aa12.16□□□□□ -0.46
USF1-202ENST00000368020 FAM230AA0A1W2PPH8 454 aa12.16□□□□□ -0.46
USF1-202ENST00000368020 ARGFXA6NJG6 315 aa12.16□□□□□ -0.46
USF1-202ENST00000368020 HTR3BO95264 441 aa12.16□□□□□ -0.46
USF1-202ENST00000368020 CELA3AP09093 270 aa12.16□□□□□ -0.46
USF1-202ENST00000368020 AKR1C4P17516 323 aa12.16□□□□□ -0.46
USF1-202ENST00000368020 AP2S1P53680 142 aaPredicted RBP12.16□□□□□ -0.46
USF1-202ENST00000368020 UCNP55089 124 aa12.16□□□□□ -0.46
USF1-202ENST00000368020 PLP2Q04941 152 aa12.16□□□□□ -0.46
USF1-202ENST00000368020 HLXQ14774 488 aaPredicted RBP12.16□□□□□ -0.46
USF1-202ENST00000368020 GSG1LQ6UXU4 331 aa12.16□□□□□ -0.46
USF1-202ENST00000368020 ZNF546Q86UE3 836 aa12.16□□□□□ -0.46
USF1-202ENST00000368020 SLC51BQ86UW2 128 aa12.16□□□□□ -0.46
USF1-202ENST00000368020 TUSC5Q8IXB3 177 aa12.16□□□□□ -0.46
USF1-202ENST00000368020 OR6K3Q8NGY3 331 aa12.16□□□□□ -0.46
USF1-202ENST00000368020 COQ8AQ8NI60 647 aa12.16□□□□□ -0.46
USF1-202ENST00000368020 MARCH1Q8TCQ1 289 aa12.16□□□□□ -0.46
USF1-202ENST00000368020 SLC39A7Q92504 469 aa12.16□□□□□ -0.46
USF1-202ENST00000368020 EMG1Q92979 244 aaKnown RBP12.16□□□□□ -0.46
USF1-202ENST00000368020 APOBEC3DQ96AK3 386 aaPredicted RBP12.16□□□□□ -0.46
USF1-202ENST00000368020 CITED4Q96RK1 184 aa12.16□□□□□ -0.46
USF1-202ENST00000368020 DHRS9Q9BPW9 319 aa12.16□□□□□ -0.46
USF1-202ENST00000368020 ST6GALNAC5Q9BVH7 336 aa12.16□□□□□ -0.46
USF1-202ENST00000368020 HES7Q9BYE0 225 aa12.16□□□□□ -0.46
USF1-202ENST00000368020 PLA2G3Q9NZ20 509 aa12.16□□□□□ -0.46
USF1-202ENST00000368020 EHFQ9NZC4 300 aa12.16□□□□□ -0.46
USF1-202ENST00000368020 A0A1B0GW55 424 aa12.15□□□□□ -0.46
USF1-202ENST00000368020 FAM90A10PA6NDY2 464 aa12.15□□□□□ -0.46
USF1-202ENST00000368020 FAM90A18PA6NE21 464 aa12.15□□□□□ -0.46
USF1-202ENST00000368020 FAM90A16PA6NEW6 464 aa12.15□□□□□ -0.46
USF1-202ENST00000368020 FAM90A20PA6NIJ5 464 aa12.15□□□□□ -0.46
USF1-202ENST00000368020 FAM90A8PA6NJQ4 464 aa12.15□□□□□ -0.46
USF1-202ENST00000368020 FAM90A7PA6NKC0 464 aa12.15□□□□□ -0.46
USF1-202ENST00000368020 FAM90A22PA8MWA6 464 aa12.15□□□□□ -0.46
USF1-202ENST00000368020 FAM90A12PA8MX19 464 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms