RNA–Protein interactions for RNA: ENST00000360019.7

CLN3-206, Transcript of CLN3, battenin, humanhuman

TSL 2 BASIC

Gene CLN3, Length 1,840 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-206ENST00000360019 WIPF3A6NGB9 483 aa15.84■□□□□ 0.13
CLN3-206ENST00000360019 SIAH2O43255 324 aa15.84■□□□□ 0.13
CLN3-206ENST00000360019 PTHLHP12272 177 aa15.84■□□□□ 0.13
CLN3-206ENST00000360019 MGMTP16455 207 aa15.84■□□□□ 0.13
CLN3-206ENST00000360019 RPS27AP62979 156 aaKnown RBP15.84■□□□□ 0.13
CLN3-206ENST00000360019 PITPNAQ00169 270 aa15.84■□□□□ 0.13
CLN3-206ENST00000360019 RSU1Q15404 277 aa15.84■□□□□ 0.13
CLN3-206ENST00000360019 FAM76BQ5HYJ3 339 aa15.84■□□□□ 0.13
CLN3-206ENST00000360019 CDH24Q86UP0 819 aa15.84■□□□□ 0.13
CLN3-206ENST00000360019 OR51F2Q8NH61 342 aa15.84■□□□□ 0.13
CLN3-206ENST00000360019 GTF3AQ92664 365 aaKnown RBP15.84■□□□□ 0.13
CLN3-206ENST00000360019 OR51I2Q9H344 312 aa15.84■□□□□ 0.13
CLN3-206ENST00000360019 NOP16Q9Y3C1 178 aaKnown RBP15.84■□□□□ 0.13
CLN3-206ENST00000360019 METTL21EPA6NDL7 271 aa15.84■□□□□ 0.13
CLN3-206ENST00000360019 SHISA9B4DS77 424 aa15.84■□□□□ 0.13
CLN3-206ENST00000360019 CTDSPLO15194 276 aa15.84■□□□□ 0.13
CLN3-206ENST00000360019 SFTPBP07988 381 aa15.84■□□□□ 0.13
CLN3-206ENST00000360019 HAGHLQ6PII5 290 aaPredicted RBP15.84■□□□□ 0.13
CLN3-206ENST00000360019 ZNF573Q86YE8 665 aa15.84■□□□□ 0.13
CLN3-206ENST00000360019 ZSCAN4Q8NAM6 433 aaPredicted RBP15.84■□□□□ 0.13
CLN3-206ENST00000360019 MRPL24Q96A35 216 aaKnown RBP15.84■□□□□ 0.13
CLN3-206ENST00000360019 PHF21AQ96BD5 680 aa15.84■□□□□ 0.13
CLN3-206ENST00000360019 SLC22A4Q9H015 551 aa15.84■□□□□ 0.13
CLN3-206ENST00000360019 ZNF442Q9H7R0 627 aa15.84■□□□□ 0.13
CLN3-206ENST00000360019 RABL2AQ9UBK7 228 aaPredicted RBP15.84■□□□□ 0.13
CLN3-206ENST00000360019 RABL2BQ9UNT1 228 aa15.84■□□□□ 0.13
CLN3-206ENST00000360019 ATP23Q9Y6H3 246 aa15.84■□□□□ 0.13
CLN3-206ENST00000360019 TRAV18A0A075B6X5 111 aa15.83■□□□□ 0.12
CLN3-206ENST00000360019 A0A0A6YYH2 397 aa15.83■□□□□ 0.12
CLN3-206ENST00000360019 A0A1W2PQ09 198 aa15.83■□□□□ 0.12
CLN3-206ENST00000360019 A6NJ64 397 aa15.83■□□□□ 0.12
CLN3-206ENST00000360019 NPBWR2P48146 333 aa15.83■□□□□ 0.12
CLN3-206ENST00000360019 VEGFCP49767 419 aa15.83■□□□□ 0.12
CLN3-206ENST00000360019 DGCR2P98153 550 aa15.83■□□□□ 0.12
CLN3-206ENST00000360019 ZNF154Q13106 437 aa15.83■□□□□ 0.12
CLN3-206ENST00000360019 OR13G1Q8NGZ3 307 aa15.83■□□□□ 0.12
CLN3-206ENST00000360019 SELENOIQ9C0D9 397 aa15.83■□□□□ 0.12
CLN3-206ENST00000360019 AUNIPQ9H7T9 357 aa15.83■□□□□ 0.12
CLN3-206ENST00000360019 IL36GQ9NZH8 169 aa15.83■□□□□ 0.12
CLN3-206ENST00000360019 POU2F3Q9UKI9 436 aa15.83■□□□□ 0.12
CLN3-206ENST00000360019 USP9XQ93008 2570 aaPredicted RBP15.83■□□□□ 0.12
CLN3-206ENST00000360019 F5H5P2 479 aa15.82■□□□□ 0.12
CLN3-206ENST00000360019 SYNGR1O43759 233 aa15.82■□□□□ 0.12
CLN3-206ENST00000360019 LANCL1O43813 399 aa15.82■□□□□ 0.12
CLN3-206ENST00000360019 ZNF780AO75290 641 aaPredicted RBP15.82■□□□□ 0.12
CLN3-206ENST00000360019 TPPPO94811 219 aa15.82■□□□□ 0.12
CLN3-206ENST00000360019 HTR3BO95264 441 aa15.82■□□□□ 0.12
CLN3-206ENST00000360019 MPZP25189 248 aa15.82■□□□□ 0.12
CLN3-206ENST00000360019 RNASE12Q5GAN4 147 aaKnown RBP15.82■□□□□ 0.12
CLN3-206ENST00000360019 RTN4RL2Q86UN3 420 aa15.82■□□□□ 0.12
CLN3-206ENST00000360019 BATF2Q8N1L9 274 aa15.82■□□□□ 0.12
CLN3-206ENST00000360019 TRIM63Q969Q1 353 aa15.82■□□□□ 0.12
CLN3-206ENST00000360019 SLAMF9Q96A28 289 aa15.82■□□□□ 0.12
CLN3-206ENST00000360019 TM2D1Q9BX74 207 aa15.82■□□□□ 0.12
CLN3-206ENST00000360019 MTCH1Q9NZJ7 389 aa15.82■□□□□ 0.12
CLN3-206ENST00000360019 IGHV3-64DA0A0J9YX35 117 aa15.82■□□□□ 0.12
CLN3-206ENST00000360019 LRP5LA4QPB2 252 aa15.82■□□□□ 0.12
CLN3-206ENST00000360019 ZSCAN5BA6NJL1 495 aa15.82■□□□□ 0.12
CLN3-206ENST00000360019 SOCS1O15524 211 aa15.82■□□□□ 0.12
CLN3-206ENST00000360019 CSTBP04080 98 aaKnown RBP15.82■□□□□ 0.12
CLN3-206ENST00000360019 MAB21L1Q13394 359 aa15.82■□□□□ 0.12
CLN3-206ENST00000360019 ADIPOQQ15848 244 aa15.82■□□□□ 0.12
CLN3-206ENST00000360019 BEX5Q5H9J7 111 aa15.82■□□□□ 0.12
CLN3-206ENST00000360019 RAB12Q6IQ22 244 aa15.82■□□□□ 0.12
CLN3-206ENST00000360019 TMEM200AQ86VY9 491 aa15.82■□□□□ 0.12
CLN3-206ENST00000360019 SAXO1Q8IYX7 474 aa15.82■□□□□ 0.12
CLN3-206ENST00000360019 FAM89BQ8N5H3 189 aa15.82■□□□□ 0.12
CLN3-206ENST00000360019 SMIM4Q8WVI0 70 aa15.82■□□□□ 0.12
CLN3-206ENST00000360019 YIPF5Q969M3 257 aa15.82■□□□□ 0.12
CLN3-206ENST00000360019 Q96M66 194 aa15.82■□□□□ 0.12
CLN3-206ENST00000360019 THAP7Q9BT49 309 aaPredicted RBP15.82■□□□□ 0.12
CLN3-206ENST00000360019 URM1Q9BTM9 101 aaKnown RBP15.82■□□□□ 0.12
CLN3-206ENST00000360019 PKIBQ9C010 78 aa15.82■□□□□ 0.12
CLN3-206ENST00000360019 ZMAT3Q9HA38 289 aaKnown RBP15.82■□□□□ 0.12
CLN3-206ENST00000360019 TAAR3PQ9P1P4 343 aa15.82■□□□□ 0.12
CLN3-206ENST00000360019 DOPEY1Q5JWR5 2465 aa15.81■□□□□ 0.12
CLN3-206ENST00000360019 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.81■□□□□ 0.12
CLN3-206ENST00000360019 F8VVB4 439 aa15.81■□□□□ 0.12
CLN3-206ENST00000360019 F8VWA3 439 aa15.81■□□□□ 0.12
CLN3-206ENST00000360019 J3QT63 122 aa15.81■□□□□ 0.12
CLN3-206ENST00000360019 RHBDL1O75783 438 aa15.81■□□□□ 0.12
CLN3-206ENST00000360019 CD3EP07766 207 aa15.81■□□□□ 0.12
CLN3-206ENST00000360019 OR4A8P0C604 315 aa15.81■□□□□ 0.12
CLN3-206ENST00000360019 GTF2F2P13984 249 aa15.81■□□□□ 0.12
CLN3-206ENST00000360019 BCL3P20749 454 aa15.81■□□□□ 0.12
CLN3-206ENST00000360019 IL24Q13007 206 aa15.81■□□□□ 0.12
CLN3-206ENST00000360019 GPR176Q14439 515 aa15.81■□□□□ 0.12
CLN3-206ENST00000360019 Q8NFD4 153 aa15.81■□□□□ 0.12
CLN3-206ENST00000360019 OR51T1Q8NGJ9 327 aa15.81■□□□□ 0.12
CLN3-206ENST00000360019 OR10R2Q8NGX6 335 aa15.81■□□□□ 0.12
CLN3-206ENST00000360019 AQP3Q92482 292 aa15.81■□□□□ 0.12
CLN3-206ENST00000360019 NEUROG1Q92886 237 aa15.81■□□□□ 0.12
CLN3-206ENST00000360019 CYYR1Q96J86 154 aa15.81■□□□□ 0.12
CLN3-206ENST00000360019 CXXC4Q9H2H0 198 aa15.81■□□□□ 0.12
CLN3-206ENST00000360019 ELF5Q9UKW6 265 aaPredicted RBP15.81■□□□□ 0.12
CLN3-206ENST00000360019 TBC1D24Q9ULP9 559 aa15.81■□□□□ 0.12
CLN3-206ENST00000360019 MEIOCA2RUB1 952 aa15.8■□□□□ 0.12
CLN3-206ENST00000360019 ISPDA4D126 451 aa15.8■□□□□ 0.12
CLN3-206ENST00000360019 TMEM210A6NLX4 147 aa15.8■□□□□ 0.12
CLN3-206ENST00000360019 FOXI3A8MTJ6 420 aaPredicted RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms