RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 MRGPRDQ8TDS7 321 aa11.82□□□□□ -0.52
COL1A1-201ENST00000225964 MMP7P09237 267 aaPredicted RBP11.82□□□□□ -0.52
COL1A1-201ENST00000225964 C16orf47Q6ZP98 133 aaPredicted RBP11.82□□□□□ -0.52
COL1A1-201ENST00000225964 OR4C16Q8NGL9 310 aa11.82□□□□□ -0.52
COL1A1-201ENST00000225964 APOBEC4Q8WW27 367 aaKnown RBP11.82□□□□□ -0.52
COL1A1-201ENST00000225964 CDCA4Q9BXL8 241 aa11.82□□□□□ -0.52
COL1A1-201ENST00000225964 ZFP64Q9NPA5 681 aa11.82□□□□□ -0.52
COL1A1-201ENST00000225964 ERRFI1Q9UJM3 462 aaPredicted RBP11.82□□□□□ -0.52
COL1A1-201ENST00000225964 PAPPA2Q9BXP8 1791 aa11.82□□□□□ -0.52
COL1A1-201ENST00000225964 RER1O15258 196 aa11.82□□□□□ -0.52
COL1A1-201ENST00000225964 KLK8O60259 260 aa11.82□□□□□ -0.52
COL1A1-201ENST00000225964 GYPAP02724 150 aa11.82□□□□□ -0.52
COL1A1-201ENST00000225964 SP6Q3SY56 376 aa11.82□□□□□ -0.52
COL1A1-201ENST00000225964 JMJD6Q6NYC1 403 aaPredicted RBP11.82□□□□□ -0.52
COL1A1-201ENST00000225964 OR1A1Q9P1Q5 309 aa11.82□□□□□ -0.52
COL1A1-201ENST00000225964 SP1P08047 785 aa11.82□□□□□ -0.52
COL1A1-201ENST00000225964 B4GALNT1Q00973 533 aa11.82□□□□□ -0.52
COL1A1-201ENST00000225964 TIGD3Q6B0B8 471 aa11.82□□□□□ -0.52
COL1A1-201ENST00000225964 SPNS2Q8IVW8 549 aa11.82□□□□□ -0.52
COL1A1-201ENST00000225964 SPSB1Q96BD6 273 aa11.82□□□□□ -0.52
COL1A1-201ENST00000225964 TMEM30AQ9NV96 361 aa11.82□□□□□ -0.52
COL1A1-201ENST00000225964 A0A1W2PPQ1 181 aa11.82□□□□□ -0.52
COL1A1-201ENST00000225964 TPPP2P59282 170 aa11.82□□□□□ -0.52
COL1A1-201ENST00000225964 B3GNTL1Q67FW5 361 aaPredicted RBP11.82□□□□□ -0.52
COL1A1-201ENST00000225964 PWWP2BQ6NUJ5 590 aa11.82□□□□□ -0.52
COL1A1-201ENST00000225964 A0A1W2PN81 502 aa11.81□□□□□ -0.52
COL1A1-201ENST00000225964 ARRDC5A6NEK1 342 aa11.81□□□□□ -0.52
COL1A1-201ENST00000225964 RAB5AP20339 215 aa11.81□□□□□ -0.52
COL1A1-201ENST00000225964 CHRNA7P36544 502 aa11.81□□□□□ -0.52
COL1A1-201ENST00000225964 ASAH1Q13510 395 aa11.81□□□□□ -0.52
COL1A1-201ENST00000225964 TMEM215Q68D42 235 aa11.81□□□□□ -0.52
COL1A1-201ENST00000225964 DYNC2LI1Q8TCX1 351 aa11.81□□□□□ -0.52
COL1A1-201ENST00000225964 NEIL1Q96FI4 390 aaPredicted RBP11.81□□□□□ -0.52
COL1A1-201ENST00000225964 DERL3Q96Q80 235 aa11.81□□□□□ -0.52
COL1A1-201ENST00000225964 LHX9Q9NQ69 397 aa11.81□□□□□ -0.52
COL1A1-201ENST00000225964 TUBAL3A6NHL2 446 aa11.81□□□□□ -0.52
COL1A1-201ENST00000225964 ACSM4P0C7M7 580 aa11.81□□□□□ -0.52
COL1A1-201ENST00000225964 GABRA1P14867 456 aa11.81□□□□□ -0.52
COL1A1-201ENST00000225964 SPINK2P20155 84 aa11.81□□□□□ -0.52
COL1A1-201ENST00000225964 RBPMS2Q6ZRY4 209 aaKnown RBP11.81□□□□□ -0.52
COL1A1-201ENST00000225964 HGDQ93099 445 aa11.81□□□□□ -0.52
COL1A1-201ENST00000225964 FAAP24Q9BTP7 215 aa11.81□□□□□ -0.52
COL1A1-201ENST00000225964 THYN1Q9P016 225 aa11.81□□□□□ -0.52
COL1A1-201ENST00000225964 IGKV3-7A0A075B6H7 116 aa11.81□□□□□ -0.52
COL1A1-201ENST00000225964 TMEM272A0A1B0GTI8 110 aa11.81□□□□□ -0.52
COL1A1-201ENST00000225964 DLL1O00548 723 aa11.81□□□□□ -0.52
COL1A1-201ENST00000225964 GATCO43716 136 aaKnown RBP11.81□□□□□ -0.52
COL1A1-201ENST00000225964 GABRB1P18505 474 aa11.81□□□□□ -0.52
COL1A1-201ENST00000225964 RELL2Q8NC24 303 aaPredicted RBP11.81□□□□□ -0.52
COL1A1-201ENST00000225964 PTPMT1Q8WUK0 201 aaPredicted RBP11.81□□□□□ -0.52
COL1A1-201ENST00000225964 UFC1Q9Y3C8 167 aa11.81□□□□□ -0.52
COL1A1-201ENST00000225964 TCRBV5S2A0A599 114 aa11.81□□□□□ -0.52
COL1A1-201ENST00000225964 ORM2P19652 201 aa11.81□□□□□ -0.52
COL1A1-201ENST00000225964 CALCRP30988 508 aa11.81□□□□□ -0.52
COL1A1-201ENST00000225964 HOXA4Q00056 320 aaPredicted RBP11.81□□□□□ -0.52
COL1A1-201ENST00000225964 NHLRC1Q6VVB1 395 aa11.81□□□□□ -0.52
COL1A1-201ENST00000225964 PRSS41Q7RTY9 318 aa11.81□□□□□ -0.52
COL1A1-201ENST00000225964 TGIF2LYQ8IUE0 185 aa11.81□□□□□ -0.52
COL1A1-201ENST00000225964 OR52L2PQ8NGH6 319 aa11.81□□□□□ -0.52
COL1A1-201ENST00000225964 TRAV38-1A0A0B4J264 116 aa11.81□□□□□ -0.52
COL1A1-201ENST00000225964 KISS1Q15726 138 aa11.81□□□□□ -0.52
COL1A1-201ENST00000225964 CCDC190Q86UF4 302 aa11.81□□□□□ -0.52
COL1A1-201ENST00000225964 OR2A5Q96R48 311 aa11.81□□□□□ -0.52
COL1A1-201ENST00000225964 DHRS3O75911 302 aa11.8□□□□□ -0.52
COL1A1-201ENST00000225964 PMCHP20382 165 aa11.8□□□□□ -0.52
COL1A1-201ENST00000225964 RNASEKQ6P5S7 137 aaKnown RBP11.8□□□□□ -0.52
COL1A1-201ENST00000225964 OR4D10Q8NGI6 311 aa11.8□□□□□ -0.52
COL1A1-201ENST00000225964 CXorf58Q96LI9 332 aa11.8□□□□□ -0.52
COL1A1-201ENST00000225964 LPAR2Q9HBW0 351 aa11.8□□□□□ -0.52
COL1A1-201ENST00000225964 ZNF205O95201 554 aa11.8□□□□□ -0.52
COL1A1-201ENST00000225964 C1QBP02746 253 aa11.8□□□□□ -0.52
COL1A1-201ENST00000225964 OR2B8PP59922 312 aa11.8□□□□□ -0.52
COL1A1-201ENST00000225964 PRICKLE4Q2TBC4 344 aa11.8□□□□□ -0.52
COL1A1-201ENST00000225964 TIPARPQ7Z3E1 657 aaKnown RBP11.8□□□□□ -0.52
COL1A1-201ENST00000225964 TUSC5Q8IXB3 177 aa11.8□□□□□ -0.52
COL1A1-201ENST00000225964 ARHGAP5-AS1Q96IT6 56 aa11.8□□□□□ -0.52
COL1A1-201ENST00000225964 ADRB1P08588 477 aa11.8□□□□□ -0.52
COL1A1-201ENST00000225964 CD37P11049 281 aa11.8□□□□□ -0.52
COL1A1-201ENST00000225964 PTOV1Q86YD1 416 aa11.8□□□□□ -0.52
COL1A1-201ENST00000225964 SPINK4O60575 86 aa11.8□□□□□ -0.52
COL1A1-201ENST00000225964 PATE4P0C8F1 98 aa11.8□□□□□ -0.52
COL1A1-201ENST00000225964 BRS3P32247 399 aa11.8□□□□□ -0.52
COL1A1-201ENST00000225964 NOL4LQ96MY1 436 aaPredicted RBP11.8□□□□□ -0.52
COL1A1-201ENST00000225964 ATP5SQ99766 215 aa11.8□□□□□ -0.52
COL1A1-201ENST00000225964 CRISPLD2Q9H0B8 497 aa11.8□□□□□ -0.52
COL1A1-201ENST00000225964 PRDM7Q9NQW5 492 aa11.8□□□□□ -0.52
COL1A1-201ENST00000225964 ATXN7O15265 892 aaPredicted RBP11.8□□□□□ -0.52
COL1A1-201ENST00000225964 DNPH1O43598 174 aa11.8□□□□□ -0.52
COL1A1-201ENST00000225964 CD200P41217 278 aa11.8□□□□□ -0.52
COL1A1-201ENST00000225964 MAGEA5P43359 124 aa11.8□□□□□ -0.52
COL1A1-201ENST00000225964 TCTE3Q8IZS6 198 aa11.8□□□□□ -0.52
COL1A1-201ENST00000225964 PPP1R1CQ8WVI7 109 aa11.8□□□□□ -0.52
COL1A1-201ENST00000225964 TRAPPC1Q9Y5R8 145 aa11.8□□□□□ -0.52
COL1A1-201ENST00000225964 HMX2A2RU54 273 aa11.79□□□□□ -0.52
COL1A1-201ENST00000225964 RNF224P0DH78 156 aa11.79□□□□□ -0.52
COL1A1-201ENST00000225964 RPL34P49207 117 aaKnown RBP11.79□□□□□ -0.52
COL1A1-201ENST00000225964 NXPH1P58417 271 aa11.79□□□□□ -0.52
COL1A1-201ENST00000225964 MOB1BQ7L9L4 216 aa11.79□□□□□ -0.52
COL1A1-201ENST00000225964 UQCC1Q9NVA1 299 aa11.79□□□□□ -0.52
COL1A1-201ENST00000225964 KLK11Q9UBX7 282 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms