RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 CTDSPLO15194 276 aa17.78■□□□□ 0.44
PNKP-203ENST00000593946 SPRY1O43609 319 aaPredicted RBP17.78■□□□□ 0.44
PNKP-203ENST00000593946 CDC14BO60729 498 aa17.78■□□□□ 0.44
PNKP-203ENST00000593946 GCH1P30793 250 aa17.78■□□□□ 0.44
PNKP-203ENST00000593946 FABP6P51161 128 aa17.78■□□□□ 0.44
PNKP-203ENST00000593946 TAS2R20P59543 309 aa17.78■□□□□ 0.44
PNKP-203ENST00000593946 PDZK1IP1Q13113 114 aa17.78■□□□□ 0.44
PNKP-203ENST00000593946 MSMPQ1L6U9 139 aa17.78■□□□□ 0.44
PNKP-203ENST00000593946 CALHM1Q8IU99 346 aa17.78■□□□□ 0.44
PNKP-203ENST00000593946 S100A13Q99584 98 aa17.78■□□□□ 0.44
PNKP-203ENST00000593946 CST11Q9H112 138 aa17.78■□□□□ 0.44
PNKP-203ENST00000593946 A0A1W2PP11 408 aa17.77■□□□□ 0.44
PNKP-203ENST00000593946 A0A1W2PQ09 198 aa17.77■□□□□ 0.44
PNKP-203ENST00000593946 METTL21EPA6NDL7 271 aa17.77■□□□□ 0.44
PNKP-203ENST00000593946 DPRXA6NFQ7 191 aa17.77■□□□□ 0.44
PNKP-203ENST00000593946 ZNF250P15622 560 aa17.77■□□□□ 0.44
PNKP-203ENST00000593946 SORDQ00796 357 aa17.77■□□□□ 0.44
PNKP-203ENST00000593946 CDH24Q86UP0 819 aa17.77■□□□□ 0.44
PNKP-203ENST00000593946 PXT1Q8NFP0 134 aa17.77■□□□□ 0.44
PNKP-203ENST00000593946 OR8G5Q8NG78 346 aa17.77■□□□□ 0.44
PNKP-203ENST00000593946 TMEM171Q8WVE6 324 aa17.77■□□□□ 0.44
PNKP-203ENST00000593946 PHF21AQ96BD5 680 aa17.77■□□□□ 0.44
PNKP-203ENST00000593946 LRRC46Q96FV0 321 aa17.77■□□□□ 0.44
PNKP-203ENST00000593946 RNF170Q96K19 258 aa17.77■□□□□ 0.44
PNKP-203ENST00000593946 BBC3Q96PG8 261 aaPredicted RBP17.77■□□□□ 0.44
PNKP-203ENST00000593946 TMEM59Q9BXS4 323 aa17.77■□□□□ 0.44
PNKP-203ENST00000593946 KCNJ16Q9NPI9 418 aa17.77■□□□□ 0.44
PNKP-203ENST00000593946 FZR1Q9UM11 496 aa17.77■□□□□ 0.44
PNKP-203ENST00000593946 ZNF732B4DXR9 585 aa17.76■□□□□ 0.43
PNKP-203ENST00000593946 ANGPTL7O43827 346 aa17.76■□□□□ 0.43
PNKP-203ENST00000593946 CRTAPO75718 401 aaPredicted RBP17.76■□□□□ 0.43
PNKP-203ENST00000593946 MPIG6BO95866 241 aa17.76■□□□□ 0.43
PNKP-203ENST00000593946 GRNP28799 593 aaKnown RBP17.76■□□□□ 0.43
PNKP-203ENST00000593946 RPS23P62266 143 aaKnown RBP17.76■□□□□ 0.43
PNKP-203ENST00000593946 OR10K1Q8NGX5 313 aa17.76■□□□□ 0.43
PNKP-203ENST00000593946 C15orf40Q8WUR7 153 aa17.76■□□□□ 0.43
PNKP-203ENST00000593946 GAL3ST1Q99999 423 aa17.76■□□□□ 0.43
PNKP-203ENST00000593946 LPAR5Q9H1C0 372 aa17.76■□□□□ 0.43
PNKP-203ENST00000593946 BANF2Q9H503 90 aa17.76■□□□□ 0.43
PNKP-203ENST00000593946 NGBQ9NPG2 151 aa17.76■□□□□ 0.43
PNKP-203ENST00000593946 NOP16Q9Y3C1 178 aaKnown RBP17.76■□□□□ 0.43
PNKP-203ENST00000593946 ICE1Q9Y2F5 2266 aa17.75■□□□□ 0.43
PNKP-203ENST00000593946 RAB27BO00194 218 aa17.75■□□□□ 0.43
PNKP-203ENST00000593946 GSTZ1O43708 216 aaPredicted RBP17.75■□□□□ 0.43
PNKP-203ENST00000593946 TIMM8AO60220 97 aaPredicted RBP17.75■□□□□ 0.43
PNKP-203ENST00000593946 PLATP00750 562 aa17.75■□□□□ 0.43
PNKP-203ENST00000593946 GNG3P63215 75 aa17.75■□□□□ 0.43
PNKP-203ENST00000593946 BSPH1Q075Z2 132 aa17.75■□□□□ 0.43
PNKP-203ENST00000593946 TFF3Q07654 80 aa17.75■□□□□ 0.43
PNKP-203ENST00000593946 RGS21Q2M5E4 152 aa17.75■□□□□ 0.43
PNKP-203ENST00000593946 MOGAT2Q3SYC2 334 aa17.75■□□□□ 0.43
PNKP-203ENST00000593946 RAB12Q6IQ22 244 aa17.75■□□□□ 0.43
PNKP-203ENST00000593946 ZNF611Q8N823 705 aa17.75■□□□□ 0.43
PNKP-203ENST00000593946 ZSCAN4Q8NAM6 433 aaPredicted RBP17.75■□□□□ 0.43
PNKP-203ENST00000593946 NUP37Q8NFH4 326 aa17.75■□□□□ 0.43
PNKP-203ENST00000593946 SMIM4Q8WVI0 70 aa17.75■□□□□ 0.43
PNKP-203ENST00000593946 TRIM63Q969Q1 353 aa17.75■□□□□ 0.43
PNKP-203ENST00000593946 RADILQ96JH8 1075 aa17.75■□□□□ 0.43
PNKP-203ENST00000593946 ADAT1Q9BUB4 502 aaKnown RBP17.75■□□□□ 0.43
PNKP-203ENST00000593946 METTL9Q9H1A3 318 aa17.75■□□□□ 0.43
PNKP-203ENST00000593946 IL36GQ9NZH8 169 aa17.75■□□□□ 0.43
PNKP-203ENST00000593946 IGKV1-12A0A0C4DH73 117 aa17.75■□□□□ 0.43
PNKP-203ENST00000593946 ABCD4O14678 606 aa17.75■□□□□ 0.43
PNKP-203ENST00000593946 SCGNO76038 276 aa17.75■□□□□ 0.43
PNKP-203ENST00000593946 IGKV1D-12P01611 117 aa17.75■□□□□ 0.43
PNKP-203ENST00000593946 MGMTP16455 207 aa17.75■□□□□ 0.43
PNKP-203ENST00000593946 SERPINA2P20848 420 aa17.75■□□□□ 0.43
PNKP-203ENST00000593946 HAAOP46952 286 aa17.75■□□□□ 0.43
PNKP-203ENST00000593946 DGCR2P98153 550 aa17.75■□□□□ 0.43
PNKP-203ENST00000593946 SCN1BQ07699 218 aa17.75■□□□□ 0.43
PNKP-203ENST00000593946 PIAS4Q8N2W9 510 aaPredicted RBP17.75■□□□□ 0.43
PNKP-203ENST00000593946 ACBD4Q8NC06 268 aa17.75■□□□□ 0.43
PNKP-203ENST00000593946 OR8S1Q8NH09 359 aa17.75■□□□□ 0.43
PNKP-203ENST00000593946 ELL3Q9HB65 397 aaPredicted RBP17.75■□□□□ 0.43
PNKP-203ENST00000593946 TRAV18A0A075B6X5 111 aa17.74■□□□□ 0.43
PNKP-203ENST00000593946 A0A0A6YYD4 124 aa17.74■□□□□ 0.43
PNKP-203ENST00000593946 A0A1B0GWJ7 208 aa17.74■□□□□ 0.43
PNKP-203ENST00000593946 IGHV3-13P01766 116 aa17.74■□□□□ 0.43
PNKP-203ENST00000593946 RPS27AP62979 156 aaKnown RBP17.74■□□□□ 0.43
PNKP-203ENST00000593946 MRPS10P82664 201 aaKnown RBP17.74■□□□□ 0.43
PNKP-203ENST00000593946 GPR176Q14439 515 aa17.74■□□□□ 0.43
PNKP-203ENST00000593946 RSU1Q15404 277 aa17.74■□□□□ 0.43
PNKP-203ENST00000593946 FAM189A2Q15884 450 aa17.74■□□□□ 0.43
PNKP-203ENST00000593946 TRIQKQ629K1 86 aa17.74■□□□□ 0.43
PNKP-203ENST00000593946 OR51F2Q8NH61 342 aa17.74■□□□□ 0.43
PNKP-203ENST00000593946 GCDHQ92947 438 aaPredicted RBP17.74■□□□□ 0.43
PNKP-203ENST00000593946 YIPF5Q969M3 257 aa17.74■□□□□ 0.43
PNKP-203ENST00000593946 MICU1Q9BPX6 476 aa17.74■□□□□ 0.43
PNKP-203ENST00000593946 NUDT16L1Q9BRJ7 211 aaKnown RBP17.74■□□□□ 0.43
PNKP-203ENST00000593946 NICN1Q9BSH3 213 aa17.74■□□□□ 0.43
PNKP-203ENST00000593946 THAP7Q9BT49 309 aaPredicted RBP17.74■□□□□ 0.43
PNKP-203ENST00000593946 RTL8AQ9BWD3 113 aa17.74■□□□□ 0.43
PNKP-203ENST00000593946 SLC22A4Q9H015 551 aa17.74■□□□□ 0.43
PNKP-203ENST00000593946 TMEM100Q9NV29 134 aa17.74■□□□□ 0.43
PNKP-203ENST00000593946 NDRG3Q9UGV2 375 aa17.74■□□□□ 0.43
PNKP-203ENST00000593946 TBC1D24Q9ULP9 559 aa17.74■□□□□ 0.43
PNKP-203ENST00000593946 IGLV3-9A0A075B6K5 115 aa17.73■□□□□ 0.43
PNKP-203ENST00000593946 GABARAPH6UMI1 98 aa17.73■□□□□ 0.43
PNKP-203ENST00000593946 LANCL1O43813 399 aa17.73■□□□□ 0.43
PNKP-203ENST00000593946 ZNF780AO75290 641 aaPredicted RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms