RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, human

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ZNF540-204	ENST00000586792	HOPX	Q9BPY8	73 aa	Predicted RBP	4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	DGCR6L	Q9BY27	220 aa		4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	PRRG3	Q9BZD7	231 aa		4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	RAB1B	Q9H0U4	201 aa		4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	OR51V1	Q9H2C8	321 aa		4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	METTL8	Q9H825	291 aa	Known RBP	4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	B3GAT2	Q9NPZ5	323 aa		4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	SLC52A3	Q9NQ40	469 aa		4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	ZC4H2	Q9NQZ6	224 aa		4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	ACOXL	Q9NUZ1	547 aa		4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	ARMCX1	Q9P291	453 aa		4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	B3GALT5	Q9Y2C3	310 aa		4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	AMDHD2	Q9Y303	409 aa		4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	GRIP1	Q9Y3R0	1128 aa		4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	RNF115	Q9Y4L5	304 aa		4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	PUS1	Q9Y606	427 aa	Known RBP eCLIP	4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	SPTAN1	Q13813	2472 aa	Known RBP	4.02	□□□□□ -1.77
ZNF540-204	ENST00000586792	COL12A1	Q99715	3063 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	FLNB	O75369	2602 aa	Known RBP	4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	LOC105371242	A0A075B767	164 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792		A0A087WUJ7	227 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792		A0A087WYN8	130 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792		A0A0B4J2E0	115 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792		A0A1B0GX12	115 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	TRAPPC13	A5PLN9	417 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	GMNC	A6NCL1	334 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	OR5H1	A6NKK0	313 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	ZNF726	A6NNF4	738 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	SERPINE3	A8MV23	424 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	DEFB108A	A8MXU0	73 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792		M0R1B8	84 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	KPNA4	O00629	521 aa	Predicted RBP	4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	ITGB1BP1	O14713	200 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	CHEK1	O14757	476 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	TIMM8A	O60220	97 aa	Predicted RBP	4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	TPST1	O60507	370 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	PRAF2	O60831	178 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	NOS1AP	O75052	506 aa	Predicted RBP	4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	ENTPD5	O75356	428 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	GCM2	O75603	506 aa	Predicted RBP	4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	ZNF682	O95780	498 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	APOC1	P02654	83 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	IFNW1	P05000	195 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	OCM	P0CE72	109 aa	Predicted RBP	4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	ADORA3	P0DMS8	318 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	COX4I1	P13073	169 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	KLK2	P20151	261 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	COX5A	P20674	150 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	CBL	P22681	906 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	IGHV1-2	P23083	117 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	GRPR	P30550	384 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	VHL	P40337	213 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	CDH12	P55289	794 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	CLDN17	P56750	224 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	PRPS1	P60891	318 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	H3F3A	P84243	136 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	POU3F1	Q03052	451 aa	Predicted RBP	4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	BSPH1	Q075Z2	132 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	SLC3A1	Q07837	685 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	SLC17A1	Q14916	467 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	TAF13	Q15543	124 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	NPTX1	Q15818	432 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	VAMP3	Q15836	100 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	DUSP7	Q16829	419 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	CNPY1	Q3B7I2	92 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	ENTPD8	Q5MY95	495 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	C6orf183	Q5T699	404 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	TSPO2	Q5TGU0	170 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	C9orf135	Q5VTT2	229 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	CGB2	Q6NT52	195 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	ADAM5	Q6NVV9	412 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	KCNIP4	Q6PIL6	250 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	SIGLEC15	Q6ZMC9	328 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	IL17REL	Q6ZVW7	336 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	CARM1	Q86X55	608 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	PTOV1	Q86YD1	416 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	C10orf111	Q8N326	155 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	OR6T1	Q8NGN1	323 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	OR52N5	Q8NH56	324 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	ADAMTS16	Q8TE57	1224 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	PHYHIP	Q92561	330 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	TMEM45B	Q96B21	275 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	ZNF524	Q96C55	264 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	OXGR1	Q96P68	337 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	ALKBH3	Q96Q83	286 aa	Predicted RBP	4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	ARHGDIG	Q99819	225 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	FOXC2	Q99958	501 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	KCTD14	Q9BQ13	255 aa	Predicted RBP	4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	ABHD14A	Q9BUJ0	271 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	POLR2J2	Q9GZM3	115 aa	Known RBP	4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	POLR2J3	Q9H1A7	115 aa	Known RBP	4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	MAGIX	Q9H6Y5	334 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	FKRP	Q9H9S5	495 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	ELOVL3	Q9HB03	270 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	SPAG4	Q9NPE6	437 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	KRCC1	Q9NPI7	259 aa	Predicted RBP	4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	NANS	Q9NR45	359 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	NDE1	Q9NXR1	346 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	ADA2	Q9NZK5	511 aa		4.01	□□□□□ -1.77
ZNF540-204	ENST00000586792	GLS2	Q9UI32	602 aa		4.01	□□□□□ -1.77

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