RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 RPL22L1Q6P5R6 122 aaKnown RBP4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 HAGHLQ6PII5 290 aaPredicted RBP4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 WDR82Q6UXN9 313 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 ZNF826PQ6ZT77 177 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 LHFPL2Q6ZUX7 228 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 UTS2BQ765I0 119 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 WDR86Q86TI4 376 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 SERPINA12Q8IW75 414 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 SCCPDHQ8NBX0 429 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 OR5D14Q8NGL3 314 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 TRMT10AQ8TBZ6 339 aaKnown RBP4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 GPR148Q8TDV2 347 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 NPRL2Q8WTW4 380 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 HPSE2Q8WWQ2 592 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 THRSPQ92748 146 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 GGHQ92820 318 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 RPL3LQ92901 407 aaKnown RBP4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 PPP1R14AQ96A00 147 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 SPSB1Q96BD6 273 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 TMIGD2Q96BF3 282 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 FGGYQ96C11 551 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 FAHD2AQ96GK7 314 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 CNBD2Q96M20 576 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 TMEM246Q9BRR3 403 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 ANKRD60Q9BZ19 345 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 CHST5Q9GZS9 411 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 TLNRD1Q9H1K6 362 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 ISG20L2Q9H9L3 353 aaKnown RBP4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 TMEM165Q9HC07 324 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 BABAM2Q9NXR7 383 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 RASL12Q9NYN1 266 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 CKLFQ9UBR5 152 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 PSORS1C1Q9UIG5 152 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 RAB26Q9ULW5 256 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 PCDHGB5Q9Y5G0 923 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 ARFGEF3Q5TH69 2177 aa4.53□□□□□ -1.68
HMGB1P40-201ENST00000525121 IGHV3OR15-7A0A075B7D8 119 aa4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 PPIAL4CA0A0B4J2A2 164 aa4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 PQLC2LA1A4F0 135 aa4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 A6NIN4 97 aa4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 OR4C45A6NMZ5 311 aa4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 A8MXK9 166 aa4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 F5H0A9 414 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 GPR37O15354 613 aa4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 AKR7A2O43488 359 aa4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 RGS10O43665 173 aa4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 NDUFB3O43676 98 aa4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 SULT1B1O43704 296 aa4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 ENSAO43768 121 aaKnown RBP4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 RRP9O43818 475 aaKnown RBP4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 CRLF1O75462 422 aa4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 ZFPL1O95159 310 aa4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 ECDO95905 644 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 PLATP00750 562 aa4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 GYPAP02724 150 aa4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 CDK1P06493 297 aa4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 HCKP08631 526 aa4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 WNT2P09544 360 aa4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 FAM157CP0CG43 387 aa4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 ATF1P18846 271 aa4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 RAB3AP20336 220 aa4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 AZGP1P25311 298 aaKnown RBP4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 MAPK3P27361 379 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 PMELP40967 661 aa4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 GABRA2P47869 451 aa4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 POU3F4P49335 361 aa4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 CAPZA1P52907 286 aa4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 MTCP1P56278 107 aa4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 NANOS3P60323 173 aaKnown RBP4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 IL13RA1P78552 427 aa4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 IL24Q13007 206 aa4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 LRRC10Q5BKY1 277 aa4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 ARMCX4Q5H9R4 360 aa4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 FAM76BQ5HYJ3 339 aa4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 RBM48Q5RL73 367 aaKnown RBP4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 OR2G6Q5TZ20 316 aa4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 TEX36Q5VZQ5 186 aa4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 Q6ZSR3 168 aa4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 KRT74Q7RTS7 529 aa4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 FAM90A1Q86YD7 464 aa4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 MKXQ8IYA7 352 aa4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 Q8IYB0 196 aa4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 RDH10Q8IZV5 341 aa4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 GCSAMQ8N6F7 178 aa4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 PNLDC1Q8NA58 520 aaKnown RBP4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 POC1AQ8NBT0 407 aa4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 C19orf18Q8NEA5 215 aa4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 DNAAF1Q8NEP3 725 aa4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 OR13C9Q8NGT0 318 aa4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 FBLIM1Q8WUP2 373 aa4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 GATAD2BQ8WXI9 593 aa4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 ST8SIA4Q92187 359 aa4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 AQP3Q92482 292 aa4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 SMIM19Q96E16 107 aa4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 MED30Q96HR3 178 aa4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 CEP19Q96LK0 163 aa4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 OPALINQ96PE5 141 aa4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 ZNF184Q99676 751 aaPredicted RBP4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 PDCD1LG2Q9BQ51 273 aa4.52□□□□□ -1.69
HMGB1P40-201ENST00000525121 PKIBQ9C010 78 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms