RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 IGLV3-16A0A075B6K0 115 aa3.35□□□□□ -1.87
HMGB1P47-201ENST00000511281 C5orf63A6NC05 138 aa3.35□□□□□ -1.87
HMGB1P47-201ENST00000511281 M0R1X1 148 aa3.35□□□□□ -1.87
HMGB1P47-201ENST00000511281 RBFOX2O43251 390 aaKnown RBP eCLIP3.35□□□□□ -1.87
HMGB1P47-201ENST00000511281 IGKV1D-16P01601 117 aa3.35□□□□□ -1.87
HMGB1P47-201ENST00000511281 SLC25A35Q3KQZ1 300 aa3.35□□□□□ -1.87
HMGB1P47-201ENST00000511281 TEX30Q5JUR7 227 aa3.35□□□□□ -1.87
HMGB1P47-201ENST00000511281 ZNF684Q5T5D7 378 aa3.35□□□□□ -1.87
HMGB1P47-201ENST00000511281 IDNKQ5T6J7 187 aa3.35□□□□□ -1.87
HMGB1P47-201ENST00000511281 ZNF470Q6ECI4 717 aa3.35□□□□□ -1.87
HMGB1P47-201ENST00000511281 NANOGP8Q6NSW7 305 aa3.35□□□□□ -1.87
HMGB1P47-201ENST00000511281 Q6ZT83 130 aa3.35□□□□□ -1.87
HMGB1P47-201ENST00000511281 SPICQ8N5J4 248 aa3.35□□□□□ -1.87
HMGB1P47-201ENST00000511281 LINC01560Q8TB33 94 aa3.35□□□□□ -1.87
HMGB1P47-201ENST00000511281 CIRBP-AS1Q8TBR5 109 aa3.35□□□□□ -1.87
HMGB1P47-201ENST00000511281 RORBQ92753 470 aa3.35□□□□□ -1.87
HMGB1P47-201ENST00000511281 S100PBPQ96BU1 408 aa3.35□□□□□ -1.87
HMGB1P47-201ENST00000511281 RILPQ96NA2 401 aa3.35□□□□□ -1.87
HMGB1P47-201ENST00000511281 TMED9Q9BVK6 235 aa3.35□□□□□ -1.87
HMGB1P47-201ENST00000511281 SHCBP1LQ9BZQ2 653 aa3.35□□□□□ -1.87
HMGB1P47-201ENST00000511281 NRBP2Q9NSY0 501 aa3.35□□□□□ -1.87
HMGB1P47-201ENST00000511281 TMEM100Q9NV29 134 aa3.35□□□□□ -1.87
HMGB1P47-201ENST00000511281 RFNGQ9Y644 331 aa3.35□□□□□ -1.87
HMGB1P47-201ENST00000511281 UPK1AO00322 258 aa3.34□□□□□ -1.87
HMGB1P47-201ENST00000511281 BET1O15155 118 aa3.34□□□□□ -1.87
HMGB1P47-201ENST00000511281 SCN2BO60939 215 aa3.34□□□□□ -1.87
HMGB1P47-201ENST00000511281 GATBO75879 557 aaKnown RBP3.34□□□□□ -1.87
HMGB1P47-201ENST00000511281 IGLV3-25P01717 112 aa3.34□□□□□ -1.87
HMGB1P47-201ENST00000511281 ME2P23368 584 aa3.34□□□□□ -1.87
HMGB1P47-201ENST00000511281 IL3RAP26951 378 aa3.34□□□□□ -1.87
HMGB1P47-201ENST00000511281 OR2B6P58173 313 aa3.34□□□□□ -1.87
HMGB1P47-201ENST00000511281 KRTAP10-7P60409 375 aaPredicted RBP3.34□□□□□ -1.87
HMGB1P47-201ENST00000511281 LINC00303Q3SY05 128 aa3.34□□□□□ -1.87
HMGB1P47-201ENST00000511281 YIF1BQ5BJH7 314 aa3.34□□□□□ -1.87
HMGB1P47-201ENST00000511281 PDPK2PQ6A1A2 396 aa3.34□□□□□ -1.87
HMGB1P47-201ENST00000511281 Q6ZSR6 202 aa3.34□□□□□ -1.87
HMGB1P47-201ENST00000511281 ERO1BQ86YB8 467 aa3.34□□□□□ -1.87
HMGB1P47-201ENST00000511281 TMEM256Q8N2U0 113 aa3.34□□□□□ -1.87
HMGB1P47-201ENST00000511281 LRRC52Q8N7C0 313 aa3.34□□□□□ -1.87
HMGB1P47-201ENST00000511281 TTLQ8NG68 377 aa3.34□□□□□ -1.87
HMGB1P47-201ENST00000511281 HGDQ93099 445 aa3.34□□□□□ -1.87
HMGB1P47-201ENST00000511281 SERPINB11Q96P15 392 aa3.34□□□□□ -1.87
HMGB1P47-201ENST00000511281 VAT1Q99536 393 aa3.34□□□□□ -1.87
HMGB1P47-201ENST00000511281 SLC38A1Q9H2H9 487 aa3.34□□□□□ -1.87
HMGB1P47-201ENST00000511281 CHMP4BQ9H444 224 aaKnown RBP3.34□□□□□ -1.87
HMGB1P47-201ENST00000511281 C12orf4Q9NQ89 552 aa3.34□□□□□ -1.87
HMGB1P47-201ENST00000511281 ANXA10Q9UJ72 324 aa3.34□□□□□ -1.87
HMGB1P47-201ENST00000511281 LRRC42Q9Y546 428 aa3.34□□□□□ -1.87
HMGB1P47-201ENST00000511281 NUP214P35658 2090 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P47-201ENST00000511281 ANKRD12Q6UB98 2062 aa3.33□□□□□ -1.88
HMGB1P47-201ENST00000511281 DOCK8Q8NF50 2099 aa3.33□□□□□ -1.88
HMGB1P47-201ENST00000511281 CDIPTO14735 213 aa3.33□□□□□ -1.88
HMGB1P47-201ENST00000511281 TCAPO15273 167 aa3.33□□□□□ -1.88
HMGB1P47-201ENST00000511281 NDUFS5O43920 106 aa3.33□□□□□ -1.88
HMGB1P47-201ENST00000511281 PLIN3O60664 434 aa3.33□□□□□ -1.88
HMGB1P47-201ENST00000511281 MED6O75586 246 aa3.33□□□□□ -1.88
HMGB1P47-201ENST00000511281 VAMP5O95183 116 aa3.33□□□□□ -1.88
HMGB1P47-201ENST00000511281 LDOC1O95751 146 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P47-201ENST00000511281 CCNE2O96020 404 aa3.33□□□□□ -1.88
HMGB1P47-201ENST00000511281 GTF2H1P32780 548 aa3.33□□□□□ -1.88
HMGB1P47-201ENST00000511281 SLAMF1Q13291 335 aa3.33□□□□□ -1.88
HMGB1P47-201ENST00000511281 ANGPT1Q15389 498 aa3.33□□□□□ -1.88
HMGB1P47-201ENST00000511281 OR4D1Q15615 310 aa3.33□□□□□ -1.88
HMGB1P47-201ENST00000511281 SNRNP35Q16560 246 aaKnown RBP3.33□□□□□ -1.88
HMGB1P47-201ENST00000511281 CEACAM16Q2WEN9 425 aa3.33□□□□□ -1.88
HMGB1P47-201ENST00000511281 AP1ARQ63HQ0 302 aa3.33□□□□□ -1.88
HMGB1P47-201ENST00000511281 ATPAF2Q8N5M1 289 aa3.33□□□□□ -1.88
HMGB1P47-201ENST00000511281 RNF10Q8N5U6 811 aaKnown RBP3.33□□□□□ -1.88
HMGB1P47-201ENST00000511281 ZNF645Q8N7E2 425 aa3.33□□□□□ -1.88
HMGB1P47-201ENST00000511281 ACBD4Q8NC06 268 aa3.33□□□□□ -1.88
HMGB1P47-201ENST00000511281 UBA3Q8TBC4 463 aa3.33□□□□□ -1.88
HMGB1P47-201ENST00000511281 SLC25A46Q96AG3 418 aa3.33□□□□□ -1.88
HMGB1P47-201ENST00000511281 NEURL3Q96EH8 262 aa3.33□□□□□ -1.88
HMGB1P47-201ENST00000511281 ZFP3Q96NJ6 502 aa3.33□□□□□ -1.88
HMGB1P47-201ENST00000511281 TRNT1Q96Q11 434 aaKnown RBP3.33□□□□□ -1.88
HMGB1P47-201ENST00000511281 SPACA5Q96QH8 159 aa3.33□□□□□ -1.88
HMGB1P47-201ENST00000511281 VCXQ9H320 206 aa3.33□□□□□ -1.88
HMGB1P47-201ENST00000511281 WFDC1Q9HC57 220 aa3.33□□□□□ -1.88
HMGB1P47-201ENST00000511281 NLE1Q9NVX2 485 aaPredicted RBP3.33□□□□□ -1.88
HMGB1P47-201ENST00000511281 KLK12Q9UKR0 248 aa3.33□□□□□ -1.88
HMGB1P47-201ENST00000511281 ORC6Q9Y5N6 252 aa3.33□□□□□ -1.88
HMGB1P47-201ENST00000511281 CABIN1Q9Y6J0 2220 aa3.32□□□□□ -1.88
HMGB1P47-201ENST00000511281 IGKV6-21A0A0C4DH24 114 aa3.32□□□□□ -1.88
HMGB1P47-201ENST00000511281 CENPVL3A0A0U1RRI6 287 aa3.32□□□□□ -1.88
HMGB1P47-201ENST00000511281 A0A1B0GTI1 187 aa3.32□□□□□ -1.88
HMGB1P47-201ENST00000511281 CETN3O15182 167 aa3.32□□□□□ -1.88
HMGB1P47-201ENST00000511281 LINC00869P0C866 280 aa3.32□□□□□ -1.88
HMGB1P47-201ENST00000511281 SLC35E2BP0CK96 405 aa3.32□□□□□ -1.88
HMGB1P47-201ENST00000511281 HSPD1P10809 573 aaKnown RBP3.32□□□□□ -1.88
HMGB1P47-201ENST00000511281 PSMB2P49721 201 aa3.32□□□□□ -1.88
HMGB1P47-201ENST00000511281 IL5RAQ01344 420 aa3.32□□□□□ -1.88
HMGB1P47-201ENST00000511281 LAMTOR4Q0VGL1 99 aa3.32□□□□□ -1.88
HMGB1P47-201ENST00000511281 STX4Q12846 297 aa3.32□□□□□ -1.88
HMGB1P47-201ENST00000511281 TRDNQ13061 729 aa3.32□□□□□ -1.88
HMGB1P47-201ENST00000511281 ERICH5Q6P6B1 374 aa3.32□□□□□ -1.88
HMGB1P47-201ENST00000511281 MRPL52Q86TS9 123 aaKnown RBP3.32□□□□□ -1.88
HMGB1P47-201ENST00000511281 BBS7Q8IWZ6 715 aa3.32□□□□□ -1.88
HMGB1P47-201ENST00000511281 SLC34A3Q8N130 599 aa3.32□□□□□ -1.88
HMGB1P47-201ENST00000511281 OR2M7Q8NG81 312 aa3.32□□□□□ -1.88
HMGB1P47-201ENST00000511281 OR2L8Q8NGY9 312 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms