RNA–Protein interactions for RNA: ENST00000498136.5

ABCF3-218, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 1,014 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-218ENST00000498136 RDH10Q8IZV5 341 aa13.9□□□□□ -0.18
ABCF3-218ENST00000498136 SETD9Q8NE22 299 aa13.9□□□□□ -0.18
ABCF3-218ENST00000498136 CCDC54Q8NEL0 328 aa13.9□□□□□ -0.18
ABCF3-218ENST00000498136 OR52I1Q8NGK6 324 aa13.9□□□□□ -0.18
ABCF3-218ENST00000498136 CNIH3Q8TBE1 160 aa13.9□□□□□ -0.18
ABCF3-218ENST00000498136 TRMT10AQ8TBZ6 339 aaKnown RBP13.9□□□□□ -0.18
ABCF3-218ENST00000498136 NPRL2Q8WTW4 380 aa13.9□□□□□ -0.18
ABCF3-218ENST00000498136 TMEM158Q8WZ71 300 aa13.9□□□□□ -0.18
ABCF3-218ENST00000498136 ST8SIA4Q92187 359 aa13.9□□□□□ -0.18
ABCF3-218ENST00000498136 VCXQ9H320 206 aa13.9□□□□□ -0.18
ABCF3-218ENST00000498136 DCLRE1BQ9H816 532 aa13.9□□□□□ -0.18
ABCF3-218ENST00000498136 SMURF1Q9HCE7 757 aa13.9□□□□□ -0.18
ABCF3-218ENST00000498136 SLC7A11Q9UPY5 501 aa13.9□□□□□ -0.18
ABCF3-218ENST00000498136 FAM230AA0A1W2PPH8 454 aa13.89□□□□□ -0.19
ABCF3-218ENST00000498136 ANKRD61A6NGH8 418 aa13.89□□□□□ -0.19
ABCF3-218ENST00000498136 NKX6-3A6NJ46 265 aa13.89□□□□□ -0.19
ABCF3-218ENST00000498136 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.89□□□□□ -0.19
ABCF3-218ENST00000498136 TNFRSF13BO14836 293 aaPredicted RBP13.89□□□□□ -0.19
ABCF3-218ENST00000498136 ENSAO43768 121 aaKnown RBP13.89□□□□□ -0.19
ABCF3-218ENST00000498136 SERPINA3P01011 423 aa13.89□□□□□ -0.19
ABCF3-218ENST00000498136 ELF3P78545 371 aaPredicted RBP13.89□□□□□ -0.19
ABCF3-218ENST00000498136 PAX2Q02962 417 aa13.89□□□□□ -0.19
ABCF3-218ENST00000498136 IKZF1Q13422 519 aa13.89□□□□□ -0.19
ABCF3-218ENST00000498136 OGFRL1Q5TC84 451 aaPredicted RBP13.89□□□□□ -0.19
ABCF3-218ENST00000498136 TMEM42Q69YG0 159 aa13.89□□□□□ -0.19
ABCF3-218ENST00000498136 Q6ZSR3 168 aa13.89□□□□□ -0.19
ABCF3-218ENST00000498136 ZNF573Q86YE8 665 aa13.89□□□□□ -0.19
ABCF3-218ENST00000498136 ZNF418Q8TF45 676 aaPredicted RBP13.89□□□□□ -0.19
ABCF3-218ENST00000498136 C22orf15Q8WYQ4 148 aa13.89□□□□□ -0.19
ABCF3-218ENST00000498136 AQP3Q92482 292 aa13.89□□□□□ -0.19
ABCF3-218ENST00000498136 TMIGD2Q96BF3 282 aa13.89□□□□□ -0.19
ABCF3-218ENST00000498136 C12orf43Q96C57 262 aaKnown RBP13.89□□□□□ -0.19
ABCF3-218ENST00000498136 PELI1Q96FA3 418 aa13.89□□□□□ -0.19
ABCF3-218ENST00000498136 INPP5EQ9NRR6 644 aa13.89□□□□□ -0.19
ABCF3-218ENST00000498136 ERVK13-1Q9NX77 482 aa13.89□□□□□ -0.19
ABCF3-218ENST00000498136 FRRS1LQ9P0K9 344 aa13.89□□□□□ -0.19
ABCF3-218ENST00000498136 KAAG1Q9UBP8 84 aa13.89□□□□□ -0.19
ABCF3-218ENST00000498136 MXRA5Q9NR99 2828 aa13.88□□□□□ -0.19
ABCF3-218ENST00000498136 KIR2DS1A0A191URI9 304 aa13.88□□□□□ -0.19
ABCF3-218ENST00000498136 A0A1B0GW55 424 aa13.88□□□□□ -0.19
ABCF3-218ENST00000498136 C22orf46C9J442 243 aa13.88□□□□□ -0.19
ABCF3-218ENST00000498136 WBP4O75554 376 aaKnown RBP13.88□□□□□ -0.19
ABCF3-218ENST00000498136 GATBO75879 557 aaKnown RBP13.88□□□□□ -0.19
ABCF3-218ENST00000498136 IGHA1P01876 353 aa13.88□□□□□ -0.19
ABCF3-218ENST00000498136 DUX4L2P0CJ85 424 aa13.88□□□□□ -0.19
ABCF3-218ENST00000498136 DUX4L3P0CJ86 424 aa13.88□□□□□ -0.19
ABCF3-218ENST00000498136 DUX4L4P0CJ87 422 aa13.88□□□□□ -0.19
ABCF3-218ENST00000498136 DUX4L5P0CJ88 424 aa13.88□□□□□ -0.19
ABCF3-218ENST00000498136 DUX4L6P0CJ89 424 aa13.88□□□□□ -0.19
ABCF3-218ENST00000498136 DUX4L7P0CJ90 424 aa13.88□□□□□ -0.19
ABCF3-218ENST00000498136 ZNF20P17024 532 aa13.88□□□□□ -0.19
ABCF3-218ENST00000498136 NANOS3P60323 173 aaKnown RBP13.88□□□□□ -0.19
ABCF3-218ENST00000498136 PAX8Q06710 450 aa13.88□□□□□ -0.19
ABCF3-218ENST00000498136 ALKBH1Q13686 389 aaKnown RBP13.88□□□□□ -0.19
ABCF3-218ENST00000498136 STUMQ69YW2 141 aa13.88□□□□□ -0.19
ABCF3-218ENST00000498136 DUX4L9Q6RFH8 374 aaPredicted RBP13.88□□□□□ -0.19
ABCF3-218ENST00000498136 BPIFB2Q8N4F0 458 aa13.88□□□□□ -0.19
ABCF3-218ENST00000498136 FAM216BQ8N7L0 139 aa13.88□□□□□ -0.19
ABCF3-218ENST00000498136 ZNF676Q8N7Q3 588 aa13.88□□□□□ -0.19
ABCF3-218ENST00000498136 ISG20L2Q9H9L3 353 aaKnown RBP13.88□□□□□ -0.19
ABCF3-218ENST00000498136 NLKQ9UBE8 527 aa13.88□□□□□ -0.19
ABCF3-218ENST00000498136 DUX4Q9UBX2 424 aa13.88□□□□□ -0.19
ABCF3-218ENST00000498136 PQLC2LA1A4F0 135 aa13.87□□□□□ -0.19
ABCF3-218ENST00000498136 J3QT63 122 aa13.87□□□□□ -0.19
ABCF3-218ENST00000498136 CASQ2O14958 399 aaPredicted RBP13.87□□□□□ -0.19
ABCF3-218ENST00000498136 NDUFB3O43676 98 aa13.87□□□□□ -0.19
ABCF3-218ENST00000498136 SYNGR1O43759 233 aa13.87□□□□□ -0.19
ABCF3-218ENST00000498136 FPR2P25090 351 aa13.87□□□□□ -0.19
ABCF3-218ENST00000498136 CAPGP40121 348 aa13.87□□□□□ -0.19
ABCF3-218ENST00000498136 GABRA2P47869 451 aa13.87□□□□□ -0.19
ABCF3-218ENST00000498136 CCR9P51686 369 aa13.87□□□□□ -0.19
ABCF3-218ENST00000498136 ADARB1P78563 741 aaKnown RBP13.87□□□□□ -0.19
ABCF3-218ENST00000498136 LRRC10Q5BKY1 277 aa13.87□□□□□ -0.19
ABCF3-218ENST00000498136 FDX2Q6P4F2 183 aa13.87□□□□□ -0.19
ABCF3-218ENST00000498136 BTN2A1Q7KYR7 527 aa13.87□□□□□ -0.19
ABCF3-218ENST00000498136 C8orf59Q8N0T1 100 aaPredicted RBP13.87□□□□□ -0.19
ABCF3-218ENST00000498136 SYS1Q8N2H4 156 aa13.87□□□□□ -0.19
ABCF3-218ENST00000498136 PNLDC1Q8NA58 520 aaKnown RBP13.87□□□□□ -0.19
ABCF3-218ENST00000498136 RNF166Q96A37 237 aaPredicted RBP13.87□□□□□ -0.19
ABCF3-218ENST00000498136 BORCS8Q96FH0 119 aa13.87□□□□□ -0.19
ABCF3-218ENST00000498136 SLC6A7Q99884 636 aa13.87□□□□□ -0.19
ABCF3-218ENST00000498136 CHST5Q9GZS9 411 aa13.87□□□□□ -0.19
ABCF3-218ENST00000498136 MRPS18AQ9NVS2 196 aaKnown RBP13.87□□□□□ -0.19
ABCF3-218ENST00000498136 NUP50Q9UKX7 468 aa13.87□□□□□ -0.19
ABCF3-218ENST00000498136 POLDIP2Q9Y2S7 368 aa13.87□□□□□ -0.19
ABCF3-218ENST00000498136 IGHV3OR16-10A0A075B7F0 116 aa13.86□□□□□ -0.19
ABCF3-218ENST00000498136 IRGMA1A4Y4 181 aa13.86□□□□□ -0.19
ABCF3-218ENST00000498136 OR2AT4A6NND4 320 aa13.86□□□□□ -0.19
ABCF3-218ENST00000498136 TFF1P04155 84 aa13.86□□□□□ -0.19
ABCF3-218ENST00000498136 OCM2P0CE71 109 aa13.86□□□□□ -0.19
ABCF3-218ENST00000498136 OCMP0CE72 109 aaPredicted RBP13.86□□□□□ -0.19
ABCF3-218ENST00000498136 GBX2P52951 348 aaPredicted RBP13.86□□□□□ -0.19
ABCF3-218ENST00000498136 FGF12P61328 243 aa13.86□□□□□ -0.19
ABCF3-218ENST00000498136 IL18R1Q13478 541 aa13.86□□□□□ -0.19
ABCF3-218ENST00000498136 CNN3Q15417 329 aaKnown RBP13.86□□□□□ -0.19
ABCF3-218ENST00000498136 UBE2V2Q15819 145 aa13.86□□□□□ -0.19
ABCF3-218ENST00000498136 ANGPTL5Q86XS5 388 aa13.86□□□□□ -0.19
ABCF3-218ENST00000498136 BATF2Q8N1L9 274 aa13.86□□□□□ -0.19
ABCF3-218ENST00000498136 FGFRL1Q8N441 504 aa13.86□□□□□ -0.19
ABCF3-218ENST00000498136 OR13C3Q8NGS6 347 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms