RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 CNTNAP3BQ96NU0 1288 aa11.83□□□□□ -0.51
GPC1-209ENST00000495100 CYB5R1Q9UHQ9 305 aa11.83□□□□□ -0.51
GPC1-209ENST00000495100 IGKV1D-8A0A087WSZ0 117 aa11.83□□□□□ -0.52
GPC1-209ENST00000495100 LOC105371267A0A1B0GV96 52 aa11.83□□□□□ -0.52
GPC1-209ENST00000495100 HSD17B6O14756 317 aa11.83□□□□□ -0.52
GPC1-209ENST00000495100 TO15178 435 aa11.83□□□□□ -0.52
GPC1-209ENST00000495100 DHHO43323 396 aa11.83□□□□□ -0.52
GPC1-209ENST00000495100 CST7O76096 145 aa11.83□□□□□ -0.52
GPC1-209ENST00000495100 ZNF32P17041 273 aa11.83□□□□□ -0.52
GPC1-209ENST00000495100 NAT1P18440 290 aa11.83□□□□□ -0.52
GPC1-209ENST00000495100 OR2B8PP59922 312 aa11.83□□□□□ -0.52
GPC1-209ENST00000495100 PLPPR5Q32ZL2 321 aa11.83□□□□□ -0.52
GPC1-209ENST00000495100 GJC3Q8NFK1 279 aa11.83□□□□□ -0.52
GPC1-209ENST00000495100 EDAQ92838 391 aa11.83□□□□□ -0.52
GPC1-209ENST00000495100 SPTSSAQ969W0 71 aa11.83□□□□□ -0.52
GPC1-209ENST00000495100 AKR1E2Q96JD6 320 aa11.83□□□□□ -0.52
GPC1-209ENST00000495100 HES7Q9BYE0 225 aa11.83□□□□□ -0.52
GPC1-209ENST00000495100 RFNGQ9Y644 331 aa11.83□□□□□ -0.52
GPC1-209ENST00000495100 TSPAN15O95858 294 aa11.83□□□□□ -0.52
GPC1-209ENST00000495100 ZXDAP98168 799 aa11.83□□□□□ -0.52
GPC1-209ENST00000495100 UBE2V2Q15819 145 aa11.83□□□□□ -0.52
GPC1-209ENST00000495100 IZUMO4Q1ZYL8 232 aa11.83□□□□□ -0.52
GPC1-209ENST00000495100 ANKRD55Q3KP44 614 aa11.83□□□□□ -0.52
GPC1-209ENST00000495100 PGAP1Q75T13 922 aa11.83□□□□□ -0.52
GPC1-209ENST00000495100 FAM213BQ8TBF2 198 aa11.83□□□□□ -0.52
GPC1-209ENST00000495100 RRNAD1Q96FB5 475 aaKnown RBP11.83□□□□□ -0.52
GPC1-209ENST00000495100 ZNF488Q96MN9 340 aa11.83□□□□□ -0.52
GPC1-209ENST00000495100 LDAHQ9H6V9 325 aa11.83□□□□□ -0.52
GPC1-209ENST00000495100 FAM206AQ9NX38 181 aa11.83□□□□□ -0.52
GPC1-209ENST00000495100 KCNS2Q9ULS6 477 aa11.83□□□□□ -0.52
GPC1-209ENST00000495100 KCNIP3Q9Y2W7 256 aa11.83□□□□□ -0.52
GPC1-209ENST00000495100 SULT1C2O00338 296 aa11.82□□□□□ -0.52
GPC1-209ENST00000495100 LAMTOR5O43504 91 aa11.82□□□□□ -0.52
GPC1-209ENST00000495100 FOLR3P41439 243 aa11.82□□□□□ -0.52
GPC1-209ENST00000495100 TMEM50BP56557 158 aa11.82□□□□□ -0.52
GPC1-209ENST00000495100 CLEC12BQ2HXU8 276 aa11.82□□□□□ -0.52
GPC1-209ENST00000495100 ZNF565Q8N9K5 539 aa11.82□□□□□ -0.52
GPC1-209ENST00000495100 AGBL5Q8NDL9 886 aa11.82□□□□□ -0.52
GPC1-209ENST00000495100 MRPL24Q96A35 216 aaKnown RBP11.82□□□□□ -0.52
GPC1-209ENST00000495100 TAF9BQ9HBM6 251 aa11.82□□□□□ -0.52
GPC1-209ENST00000495100 ST3GAL6Q9Y274 331 aa11.82□□□□□ -0.52
GPC1-209ENST00000495100 CCDC187A0A096LP49 1063 aa11.82□□□□□ -0.52
GPC1-209ENST00000495100 A0A0J9YW62 118 aa11.82□□□□□ -0.52
GPC1-209ENST00000495100 SHISA7A6NL88 538 aa11.82□□□□□ -0.52
GPC1-209ENST00000495100 BCL2L11O43521 198 aa11.82□□□□□ -0.52
GPC1-209ENST00000495100 SOX15O60248 233 aa11.82□□□□□ -0.52
GPC1-209ENST00000495100 OR2A4O95047 310 aa11.82□□□□□ -0.52
GPC1-209ENST00000495100 IGHV3-13P01766 116 aa11.82□□□□□ -0.52
GPC1-209ENST00000495100 IGHV3-7P01780 117 aa11.82□□□□□ -0.52
GPC1-209ENST00000495100 PPA1Q15181 289 aa11.82□□□□□ -0.52
GPC1-209ENST00000495100 STK11Q15831 433 aa11.82□□□□□ -0.52
GPC1-209ENST00000495100 ISXQ2M1V0 245 aa11.82□□□□□ -0.52
GPC1-209ENST00000495100 SLC23A3Q6PIS1 610 aa11.82□□□□□ -0.52
GPC1-209ENST00000495100 Q6ZRG5 221 aa11.82□□□□□ -0.52
GPC1-209ENST00000495100 IL22RA1Q8N6P7 574 aa11.82□□□□□ -0.52
GPC1-209ENST00000495100 OXGR1Q96P68 337 aa11.82□□□□□ -0.52
GPC1-209ENST00000495100 OR2A7Q96R45 310 aa11.82□□□□□ -0.52
GPC1-209ENST00000495100 DHRS7CA6NNS2 312 aa11.82□□□□□ -0.52
GPC1-209ENST00000495100 FTCDNL1E5RQL4 147 aa11.82□□□□□ -0.52
GPC1-209ENST00000495100 ITGB2P05107 769 aa11.82□□□□□ -0.52
GPC1-209ENST00000495100 SLC35A1P78382 337 aa11.82□□□□□ -0.52
GPC1-209ENST00000495100 TEX30Q5JUR7 227 aa11.82□□□□□ -0.52
GPC1-209ENST00000495100 BEND4Q6ZU67 534 aa11.82□□□□□ -0.52
GPC1-209ENST00000495100 MRPS24Q96EL2 167 aaKnown RBP11.82□□□□□ -0.52
GPC1-209ENST00000495100 SULT4A1Q9BR01 284 aa11.82□□□□□ -0.52
GPC1-209ENST00000495100 PIGQQ9BRB3 760 aa11.82□□□□□ -0.52
GPC1-209ENST00000495100 OR14J1Q9UGF5 321 aa11.82□□□□□ -0.52
GPC1-209ENST00000495100 A0A0A6YYD4 124 aa11.81□□□□□ -0.52
GPC1-209ENST00000495100 C5orf49A4QMS7 147 aa11.81□□□□□ -0.52
GPC1-209ENST00000495100 HOXD4P09016 255 aaPredicted RBP11.81□□□□□ -0.52
GPC1-209ENST00000495100 RFPL3SP0C7P2 107 aa11.81□□□□□ -0.52
GPC1-209ENST00000495100 SELEP16581 610 aa11.81□□□□□ -0.52
GPC1-209ENST00000495100 ZP3P21754 424 aa11.81□□□□□ -0.52
GPC1-209ENST00000495100 MMP16P51512 607 aa11.81□□□□□ -0.52
GPC1-209ENST00000495100 TMEM128Q5BJH2 165 aa11.81□□□□□ -0.52
GPC1-209ENST00000495100 CXorf67Q86X51 503 aaPredicted RBP11.81□□□□□ -0.52
GPC1-209ENST00000495100 ARHGEF39Q8N4T4 335 aa11.81□□□□□ -0.52
GPC1-209ENST00000495100 WDSUB1Q8N9V3 476 aa11.81□□□□□ -0.52
GPC1-209ENST00000495100 POC1BQ8TC44 478 aa11.81□□□□□ -0.52
GPC1-209ENST00000495100 LIPHQ8WWY8 451 aa11.81□□□□□ -0.52
GPC1-209ENST00000495100 MRGPRX4Q96LA9 322 aa11.81□□□□□ -0.52
GPC1-209ENST00000495100 C5orf66Q9H5L9 145 aa11.81□□□□□ -0.52
GPC1-209ENST00000495100 KIF25Q9UIL4 384 aa11.81□□□□□ -0.52
GPC1-209ENST00000495100 PADI1Q9ULC6 663 aa11.81□□□□□ -0.52
GPC1-209ENST00000495100 MFSD2BA6NFX1 497 aa11.81□□□□□ -0.52
GPC1-209ENST00000495100 ABCD4O14678 606 aa11.81□□□□□ -0.52
GPC1-209ENST00000495100 CRHP06850 196 aa11.81□□□□□ -0.52
GPC1-209ENST00000495100 ZNF44P15621 663 aa11.81□□□□□ -0.52
GPC1-209ENST00000495100 CLDN15P56746 228 aa11.81□□□□□ -0.52
GPC1-209ENST00000495100 ROM1Q03395 351 aa11.81□□□□□ -0.52
GPC1-209ENST00000495100 PDZK1IP1Q13113 114 aa11.81□□□□□ -0.52
GPC1-209ENST00000495100 ADAM5Q6NVV9 412 aa11.81□□□□□ -0.52
GPC1-209ENST00000495100 MAML2Q8IZL2 1156 aaPredicted RBP11.81□□□□□ -0.52
GPC1-209ENST00000495100 ZSCAN4Q8NAM6 433 aaPredicted RBP11.81□□□□□ -0.52
GPC1-209ENST00000495100 SPSB2Q99619 263 aa11.81□□□□□ -0.52
GPC1-209ENST00000495100 B3GAT1Q9P2W7 334 aa11.81□□□□□ -0.52
GPC1-209ENST00000495100 SLC7A11Q9UPY5 501 aa11.81□□□□□ -0.52
GPC1-209ENST00000495100 MEMO1Q9Y316 297 aa11.81□□□□□ -0.52
GPC1-209ENST00000495100 FLVCR1Q9Y5Y0 555 aa11.81□□□□□ -0.52
GPC1-209ENST00000495100 PCNX2A6NKB5 2137 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms