RNA–Protein interactions for RNA: ENST00000452489.6

PTPA-223, Transcript of protein phosphatase 2 phosphatase activator, humanhuman

TSL 1 (best) BASIC

Gene PTPA, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPA-223ENST00000452489 NOVA1P51513 510 aaKnown RBP16.45■□□□□ 0.22
PTPA-223ENST00000452489 RPL23AP62750 156 aaKnown RBP16.45■□□□□ 0.22
PTPA-223ENST00000452489 VAMP2P63027 116 aa16.45■□□□□ 0.22
PTPA-223ENST00000452489 ZFP36L1Q07352 338 aaKnown RBP16.45■□□□□ 0.22
PTPA-223ENST00000452489 TMEM25Q86YD3 366 aa16.45■□□□□ 0.22
PTPA-223ENST00000452489 SLC26A10Q8NG04 563 aa16.45■□□□□ 0.22
PTPA-223ENST00000452489 EHFQ9NZC4 300 aa16.45■□□□□ 0.22
PTPA-223ENST00000452489 HHLA2Q9UM44 414 aa16.45■□□□□ 0.22
PTPA-223ENST00000452489 LRP12Q9Y561 859 aa16.45■□□□□ 0.22
PTPA-223ENST00000452489 SCN10AQ9Y5Y9 1956 aa16.45■□□□□ 0.22
PTPA-223ENST00000452489 PLRG1O43660 514 aaKnown RBP16.45■□□□□ 0.22
PTPA-223ENST00000452489 CEBPBP17676 345 aa16.45■□□□□ 0.22
PTPA-223ENST00000452489 ATP6V0CP27449 155 aa16.45■□□□□ 0.22
PTPA-223ENST00000452489 CTHP32929 405 aa16.45■□□□□ 0.22
PTPA-223ENST00000452489 RAB11AP62491 216 aa16.45■□□□□ 0.22
PTPA-223ENST00000452489 GABREP78334 506 aa16.45■□□□□ 0.22
PTPA-223ENST00000452489 ZNF100Q8IYN0 542 aa16.45■□□□□ 0.22
PTPA-223ENST00000452489 TMEFF1Q8IYR6 380 aa16.45■□□□□ 0.22
PTPA-223ENST00000452489 NECAP1Q8NC96 275 aa16.45■□□□□ 0.22
PTPA-223ENST00000452489 EXTL1Q92935 676 aa16.45■□□□□ 0.22
PTPA-223ENST00000452489 REEP6Q96HR9 211 aa16.45■□□□□ 0.22
PTPA-223ENST00000452489 SERINC1Q9NRX5 453 aa16.45■□□□□ 0.22
PTPA-223ENST00000452489 NAGKQ9UJ70 344 aa16.45■□□□□ 0.22
PTPA-223ENST00000452489 HIF3AQ9Y2N7 669 aa16.45■□□□□ 0.22
PTPA-223ENST00000452489 LNP1A1A4G5 178 aa16.44■□□□□ 0.22
PTPA-223ENST00000452489 CDC14CA4D256 554 aa16.44■□□□□ 0.22
PTPA-223ENST00000452489 B4E171 279 aa16.44■□□□□ 0.22
PTPA-223ENST00000452489 IFNA21P01568 189 aa16.44■□□□□ 0.22
PTPA-223ENST00000452489 CEACAM1P13688 526 aa16.44■□□□□ 0.22
PTPA-223ENST00000452489 OR3A2P47893 321 aa16.44■□□□□ 0.22
PTPA-223ENST00000452489 CDK3Q00526 305 aa16.44■□□□□ 0.22
PTPA-223ENST00000452489 SGCGQ13326 291 aa16.44■□□□□ 0.22
PTPA-223ENST00000452489 MLF2Q15773 248 aaPredicted RBP16.44■□□□□ 0.22
PTPA-223ENST00000452489 TAF9Q16594 264 aa16.44■□□□□ 0.22
PTPA-223ENST00000452489 TMEM123Q8N131 208 aa16.44■□□□□ 0.22
PTPA-223ENST00000452489 CLDND2Q8NHS1 167 aa16.44■□□□□ 0.22
PTPA-223ENST00000452489 SNIP1Q8TAD8 396 aaKnown RBP16.44■□□□□ 0.22
PTPA-223ENST00000452489 SCARF2Q96GP6 870 aaPredicted RBP16.44■□□□□ 0.22
PTPA-223ENST00000452489 SPACA5Q96QH8 159 aa16.44■□□□□ 0.22
PTPA-223ENST00000452489 TMEM242Q9NWH2 141 aa16.44■□□□□ 0.22
PTPA-223ENST00000452489 LAMP3Q9UQV4 416 aa16.44■□□□□ 0.22
PTPA-223ENST00000452489 ZFP30Q9Y2G7 519 aa16.44■□□□□ 0.22
PTPA-223ENST00000452489 A8MVM7 634 aa16.44■□□□□ 0.22
PTPA-223ENST00000452489 LATO43561 262 aa16.44■□□□□ 0.22
PTPA-223ENST00000452489 RENP00797 406 aa16.44■□□□□ 0.22
PTPA-223ENST00000452489 BCKDHBP21953 392 aa16.44■□□□□ 0.22
PTPA-223ENST00000452489 CDKN1BP46527 198 aa16.44■□□□□ 0.22
PTPA-223ENST00000452489 PDLIM4P50479 330 aa16.44■□□□□ 0.22
PTPA-223ENST00000452489 RAB38P57729 211 aa16.44■□□□□ 0.22
PTPA-223ENST00000452489 DCAF7P61962 342 aa16.44■□□□□ 0.22
PTPA-223ENST00000452489 ZNF117Q03924 483 aa16.44■□□□□ 0.22
PTPA-223ENST00000452489 RPL18Q07020 188 aaKnown RBP16.44■□□□□ 0.22
PTPA-223ENST00000452489 TPGS2Q68CL5 300 aa16.44■□□□□ 0.22
PTPA-223ENST00000452489 SSX7Q7RTT5 188 aa16.44■□□□□ 0.22
PTPA-223ENST00000452489 NKAIN3Q8N8D7 197 aa16.44■□□□□ 0.22
PTPA-223ENST00000452489 TMEM37Q8WXS4 190 aa16.44■□□□□ 0.22
PTPA-223ENST00000452489 NSG1A0A0A6YYJ2 146 aa16.43■□□□□ 0.22
PTPA-223ENST00000452489 A0A1W2PPQ1 181 aa16.43■□□□□ 0.22
PTPA-223ENST00000452489 ZNF705FA8MVS1 300 aaPredicted RBP16.43■□□□□ 0.22
PTPA-223ENST00000452489 NRG2O14511 850 aaPredicted RBP16.43■□□□□ 0.22
PTPA-223ENST00000452489 OPN1MWP04001 364 aa16.43■□□□□ 0.22
PTPA-223ENST00000452489 RPLP2P05387 115 aaKnown RBP16.43■□□□□ 0.22
PTPA-223ENST00000452489 ZNF705DP0CH99 300 aaPredicted RBP16.43■□□□□ 0.22
PTPA-223ENST00000452489 ZNF705BP0CI00 300 aaPredicted RBP16.43■□□□□ 0.22
PTPA-223ENST00000452489 OPN1MW2P0DN77 364 aa16.43■□□□□ 0.22
PTPA-223ENST00000452489 OPN1MW3P0DN78 364 aa16.43■□□□□ 0.22
PTPA-223ENST00000452489 UCP3P55916 312 aa16.43■□□□□ 0.22
PTPA-223ENST00000452489 ZNF74Q16587 644 aa16.43■□□□□ 0.22
PTPA-223ENST00000452489 CLEC12BQ2HXU8 276 aa16.43■□□□□ 0.22
PTPA-223ENST00000452489 MAJINQ3KP22 176 aa16.43■□□□□ 0.22
PTPA-223ENST00000452489 TDRG1Q3Y452 100 aa16.43■□□□□ 0.22
PTPA-223ENST00000452489 METRNLQ641Q3 311 aa16.43■□□□□ 0.22
PTPA-223ENST00000452489 FAM90A2PQ658T7 463 aa16.43■□□□□ 0.22
PTPA-223ENST00000452489 HLA-CQ95604 372 aa16.43■□□□□ 0.22
PTPA-223ENST00000452489 ANAPC10Q9UM13 185 aa16.43■□□□□ 0.22
PTPA-223ENST00000452489 RAB7AP51149 207 aa16.43■□□□□ 0.22
PTPA-223ENST00000452489 DEFB134Q4QY38 66 aa16.43■□□□□ 0.22
PTPA-223ENST00000452489 RHBDD1Q8TEB9 315 aa16.43■□□□□ 0.22
PTPA-223ENST00000452489 EMG1Q92979 244 aaKnown RBP16.43■□□□□ 0.22
PTPA-223ENST00000452489 TBX15Q96SF7 602 aa16.43■□□□□ 0.22
PTPA-223ENST00000452489 LPAR5Q9H1C0 372 aa16.43■□□□□ 0.22
PTPA-223ENST00000452489 LRFN1Q9P244 771 aa16.43■□□□□ 0.22
PTPA-223ENST00000452489 C14orf166Q9Y224 244 aaKnown RBP16.43■□□□□ 0.22
PTPA-223ENST00000452489 Q9Y3F1 56 aa16.43■□□□□ 0.22
PTPA-223ENST00000452489 PPIAL4AQ9Y536 164 aa16.43■□□□□ 0.22
PTPA-223ENST00000452489 P2RY10O00398 339 aa16.42■□□□□ 0.22
PTPA-223ENST00000452489 NXPH2O95156 264 aa16.42■□□□□ 0.22
PTPA-223ENST00000452489 GZMHP20718 246 aa16.42■□□□□ 0.22
PTPA-223ENST00000452489 ERVS71-1P61550 626 aa16.42■□□□□ 0.22
PTPA-223ENST00000452489 RUNX2Q13950 521 aa16.42■□□□□ 0.22
PTPA-223ENST00000452489 SP6Q3SY56 376 aa16.42■□□□□ 0.22
PTPA-223ENST00000452489 RTL6Q6ICC9 239 aa16.42■□□□□ 0.22
PTPA-223ENST00000452489 SLC18B1Q6NT16 456 aa16.42■□□□□ 0.22
PTPA-223ENST00000452489 SDSLQ96GA7 329 aa16.42■□□□□ 0.22
PTPA-223ENST00000452489 IGSF21Q96ID5 467 aa16.42■□□□□ 0.22
PTPA-223ENST00000452489 BANF2Q9H503 90 aa16.42■□□□□ 0.22
PTPA-223ENST00000452489 MRPS2Q9Y399 296 aaKnown RBP16.42■□□□□ 0.22
PTPA-223ENST00000452489 LRRK1Q38SD2 2015 aa16.42■□□□□ 0.22
PTPA-223ENST00000452489 CCL25O15444 150 aa16.42■□□□□ 0.22
PTPA-223ENST00000452489 CTSVO60911 334 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 133.2 ms