RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 OTOSQ8NHW6 89 aa9.25□□□□□ -0.93
LIN54-202ENST00000442461 PTPMT1Q8WUK0 201 aaPredicted RBP9.25□□□□□ -0.93
LIN54-202ENST00000442461 R3HDM4Q96D70 268 aa9.25□□□□□ -0.93
LIN54-202ENST00000442461 NAA60Q9H7X0 242 aa9.25□□□□□ -0.93
LIN54-202ENST00000442461 SRD5A3Q9H8P0 318 aa9.25□□□□□ -0.93
LIN54-202ENST00000442461 C20orf141Q9NUB4 165 aa9.25□□□□□ -0.93
LIN54-202ENST00000442461 P4HTMQ9NXG6 502 aa9.25□□□□□ -0.93
LIN54-202ENST00000442461 SCN9AQ15858 1988 aa9.24□□□□□ -0.93
LIN54-202ENST00000442461 FBLL1A6NHQ2 334 aaKnown RBP9.24□□□□□ -0.93
LIN54-202ENST00000442461 SNRPCP09234 159 aaKnown RBP9.24□□□□□ -0.93
LIN54-202ENST00000442461 ZBTB25P24278 435 aa9.24□□□□□ -0.93
LIN54-202ENST00000442461 PPOXP50336 477 aa9.24□□□□□ -0.93
LIN54-202ENST00000442461 SLC25A1P53007 311 aa9.24□□□□□ -0.93
LIN54-202ENST00000442461 ZNF684Q5T5D7 378 aa9.24□□□□□ -0.93
LIN54-202ENST00000442461 ADAD2Q8NCV1 583 aaKnown RBP9.24□□□□□ -0.93
LIN54-202ENST00000442461 BCL2L2Q92843 193 aaPredicted RBP9.24□□□□□ -0.93
LIN54-202ENST00000442461 PDFQ9HBH1 243 aa9.24□□□□□ -0.93
LIN54-202ENST00000442461 CACFD1Q9UGQ2 172 aa9.24□□□□□ -0.93
LIN54-202ENST00000442461 C5P01031 1676 aa9.24□□□□□ -0.93
LIN54-202ENST00000442461 LOC102725191A0A1B0GVB3 256 aa9.24□□□□□ -0.93
LIN54-202ENST00000442461 TMEM202A6NGA9 273 aa9.24□□□□□ -0.93
LIN54-202ENST00000442461 MANSC4A6NHS7 340 aaPredicted RBP9.24□□□□□ -0.93
LIN54-202ENST00000442461 TUSC2O75896 110 aa9.24□□□□□ -0.93
LIN54-202ENST00000442461 PEX11BO96011 259 aa9.24□□□□□ -0.93
LIN54-202ENST00000442461 TGFBR3Q03167 851 aa9.24□□□□□ -0.93
LIN54-202ENST00000442461 PLPP4Q5VZY2 271 aa9.24□□□□□ -0.93
LIN54-202ENST00000442461 ZNF770Q6IQ21 691 aaPredicted RBP9.24□□□□□ -0.93
LIN54-202ENST00000442461 NUFIP2Q7Z417 695 aaKnown RBP9.24□□□□□ -0.93
LIN54-202ENST00000442461 ZNF707Q96C28 371 aaPredicted RBP9.24□□□□□ -0.93
LIN54-202ENST00000442461 SLAMF6Q96DU3 332 aa9.24□□□□□ -0.93
LIN54-202ENST00000442461 TRIB1Q96RU8 372 aa9.24□□□□□ -0.93
LIN54-202ENST00000442461 LPAR4Q99677 370 aa9.24□□□□□ -0.93
LIN54-202ENST00000442461 PCGF1Q9BSM1 259 aa9.24□□□□□ -0.93
LIN54-202ENST00000442461 LRFN3Q9BTN0 628 aa9.24□□□□□ -0.93
LIN54-202ENST00000442461 PIAS3Q9Y6X2 628 aa9.24□□□□□ -0.93
LIN54-202ENST00000442461 A0A1B0GTH9 108 aa9.24□□□□□ -0.93
LIN54-202ENST00000442461 UBE2L5PA0A1B0GUS4 154 aa9.24□□□□□ -0.93
LIN54-202ENST00000442461 SLC25A6P12236 298 aa9.24□□□□□ -0.93
LIN54-202ENST00000442461 CD22P20273 847 aa9.24□□□□□ -0.93
LIN54-202ENST00000442461 UBE2G1P62253 170 aa9.24□□□□□ -0.93
LIN54-202ENST00000442461 NHLH1Q02575 133 aa9.24□□□□□ -0.93
LIN54-202ENST00000442461 TMEM267Q0VDI3 215 aaPredicted RBP9.24□□□□□ -0.93
LIN54-202ENST00000442461 FZD5Q13467 585 aa9.24□□□□□ -0.93
LIN54-202ENST00000442461 MLC1Q15049 377 aa9.24□□□□□ -0.93
LIN54-202ENST00000442461 ZNF776Q68DI1 518 aaPredicted RBP9.24□□□□□ -0.93
LIN54-202ENST00000442461 CATSPERDQ86XM0 798 aa9.24□□□□□ -0.93
LIN54-202ENST00000442461 BPIFA4PQ86YQ2 179 aa9.24□□□□□ -0.93
LIN54-202ENST00000442461 DMBX1Q8NFW5 382 aa9.24□□□□□ -0.93
LIN54-202ENST00000442461 ROBO4Q8WZ75 1007 aa9.24□□□□□ -0.93
LIN54-202ENST00000442461 GALNT14Q96FL9 552 aa9.24□□□□□ -0.93
LIN54-202ENST00000442461 ARHGAP5-AS1Q96IT6 56 aa9.24□□□□□ -0.93
LIN54-202ENST00000442461 TRAPPC2LQ9UL33 140 aa9.24□□□□□ -0.93
LIN54-202ENST00000442461 Q9Y3F1 56 aa9.24□□□□□ -0.93
LIN54-202ENST00000442461 MTCH2Q9Y6C9 303 aa9.24□□□□□ -0.93
LIN54-202ENST00000442461 SHROOM3Q8TF72 1996 aa9.23□□□□□ -0.93
LIN54-202ENST00000442461 RHBDL1O75783 438 aa9.23□□□□□ -0.93
LIN54-202ENST00000442461 CBR3O75828 277 aa9.23□□□□□ -0.93
LIN54-202ENST00000442461 CTSDP07339 412 aaPredicted RBP9.23□□□□□ -0.93
LIN54-202ENST00000442461 AGAP20933 346 aa9.23□□□□□ -0.93
LIN54-202ENST00000442461 FBXO46Q6PJ61 603 aaPredicted RBP9.23□□□□□ -0.93
LIN54-202ENST00000442461 TMEM25Q86YD3 366 aa9.23□□□□□ -0.93
LIN54-202ENST00000442461 KLF16Q9BXK1 252 aaPredicted RBP9.23□□□□□ -0.93
LIN54-202ENST00000442461 CLDN16Q9Y5I7 305 aa9.23□□□□□ -0.93
LIN54-202ENST00000442461 PCM1Q15154 2024 aa9.23□□□□□ -0.93
LIN54-202ENST00000442461 HSPB6O14558 160 aa9.23□□□□□ -0.93
LIN54-202ENST00000442461 SNAI1O95863 264 aaPredicted RBP9.23□□□□□ -0.93
LIN54-202ENST00000442461 BCL2P10415 239 aa9.23□□□□□ -0.93
LIN54-202ENST00000442461 ID4P47928 161 aa9.23□□□□□ -0.93
LIN54-202ENST00000442461 RPS21P63220 83 aaKnown RBP9.23□□□□□ -0.93
LIN54-202ENST00000442461 NSDHLQ15738 373 aa9.23□□□□□ -0.93
LIN54-202ENST00000442461 GABRA6Q16445 453 aa9.23□□□□□ -0.93
LIN54-202ENST00000442461 ISXQ2M1V0 245 aa9.23□□□□□ -0.93
LIN54-202ENST00000442461 ZG16BQ96DA0 208 aa9.23□□□□□ -0.93
LIN54-202ENST00000442461 MS4A6EQ96DS6 147 aa9.23□□□□□ -0.93
LIN54-202ENST00000442461 CNRIP1Q96F85 164 aaPredicted RBP9.23□□□□□ -0.93
LIN54-202ENST00000442461 MIEN1Q9BRT3 115 aa9.23□□□□□ -0.93
LIN54-202ENST00000442461 GPR84Q9NQS5 396 aa9.23□□□□□ -0.93
LIN54-202ENST00000442461 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.23□□□□□ -0.93
LIN54-202ENST00000442461 DSPPQ9NZW4 1301 aa9.23□□□□□ -0.93
LIN54-202ENST00000442461 TMED7-TICAM2A0A0A6YYA0 188 aa9.23□□□□□ -0.93
LIN54-202ENST00000442461 MEX3AA1L020 520 aaKnown RBP9.23□□□□□ -0.93
LIN54-202ENST00000442461 FAM221AA4D161 298 aa9.23□□□□□ -0.93
LIN54-202ENST00000442461 CLEC3BP05452 202 aa9.23□□□□□ -0.93
LIN54-202ENST00000442461 STAG3L2P0CL84 134 aa9.23□□□□□ -0.93
LIN54-202ENST00000442461 HOXA6P31267 233 aa9.23□□□□□ -0.93
LIN54-202ENST00000442461 GPM6AP51674 278 aa9.23□□□□□ -0.93
LIN54-202ENST00000442461 PPP2CBP62714 309 aa9.23□□□□□ -0.93
LIN54-202ENST00000442461 PPP2CAP67775 309 aa9.23□□□□□ -0.93
LIN54-202ENST00000442461 EWSR1Q01844 656 aaKnown RBP eCLIP9.23□□□□□ -0.93
LIN54-202ENST00000442461 MRPL49Q13405 166 aaKnown RBP9.23□□□□□ -0.93
LIN54-202ENST00000442461 Q56UQ5 140 aa9.23□□□□□ -0.93
LIN54-202ENST00000442461 H1FOOQ8IZA3 346 aaPredicted RBP9.23□□□□□ -0.93
LIN54-202ENST00000442461 APCDD1LQ8NCL9 501 aa9.23□□□□□ -0.93
LIN54-202ENST00000442461 OR4D11Q8NGI4 311 aa9.23□□□□□ -0.93
LIN54-202ENST00000442461 SLC25A38Q96DW6 304 aa9.23□□□□□ -0.93
LIN54-202ENST00000442461 NUDT16L1Q9BRJ7 211 aaKnown RBP9.23□□□□□ -0.93
LIN54-202ENST00000442461 TIMM29Q9BSF4 260 aa9.23□□□□□ -0.93
LIN54-202ENST00000442461 KCNK15Q9H427 330 aa9.23□□□□□ -0.93
LIN54-202ENST00000442461 MANBALQ9NQG1 85 aa9.23□□□□□ -0.93
LIN54-202ENST00000442461 PRSS37A4D1T9 235 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms