RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 EGFL6Q8IUX8 553 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 WDFY1Q8IWB7 410 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 C20orf196Q8IYI0 205 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 ZNF100Q8IYN0 542 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 TMEM123Q8N131 208 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 UBE2J2Q8N2K1 259 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 LRRC18Q8N456 261 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 ZNF283Q8N7M2 679 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 OR6Q1Q8NGQ2 317 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 OR13C3Q8NGS6 347 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 OR13C5Q8NGS8 318 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 OR2G2Q8NGZ5 317 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 FNDC9Q8TBE3 224 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 GPR148Q8TDV2 347 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 RNF128Q8TEB7 428 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 ACOT12Q8WYK0 555 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 PHYHIPQ92561 330 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 HTRA1Q92743 480 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 SLC25A46Q96AG3 418 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 TMEM45BQ96B21 275 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 APH1AQ96BI3 265 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 PGLYRP3Q96LB9 341 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 C4orf45Q96LM5 186 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 AMELYQ99218 206 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 ATF6BQ99941 703 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 PDCD1LG2Q9BQ51 273 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 MRPL13Q9BYD1 178 aaKnown RBP3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 SLIRPQ9GZT3 109 aaKnown RBP3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 CSTL1Q9H114 145 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 SLC25A18Q9H1K4 315 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 NIPAL2Q9H841 368 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 ZDHHC11Q9H8X9 412 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 SIAEQ9HAT2 523 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 PLEKHA1Q9HB21 404 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 PALMDQ9NP74 551 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 ACKR4Q9NPB9 350 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 ZFP57Q9NU63 452 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 SLCO1C1Q9NYB5 712 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 PLEK2Q9NYT0 353 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 SPRR3Q9UBC9 169 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 CKLFQ9UBR5 152 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 TINAGQ9UJW2 476 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 OR52A1Q9UKL2 312 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 FBXL3Q9UKT7 428 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 HSF4Q9ULV5 492 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 CLEC4AQ9UMR7 237 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 LSM4Q9Y4Z0 139 aaKnown RBP3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 N6AMT1Q9Y5N5 214 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 LHFPL6Q9Y693 200 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 R4GMQ9 66 aa3.27□□□□□ -1.89
HMGB3P20-201ENST00000417997 A0A075B6Q4 140 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 IGKV3D-15A0A087WSY6 115 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 TRAV1-2A0A0B4J238 106 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 TMEM269A0A1B0GVZ9 245 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 LOC107986453A0A1B0GWG9 222 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 A0A1W2PPK0 400 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 OR6C65A6NJZ3 312 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 OR4C45A6NMZ5 311 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 ZNF724A8MTY0 619 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 PRR32B1ATL7 298 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 H3BSH0 61 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 J3QRK9 145 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 SLC19A2O60779 497 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 IGHV3-9P01782 118 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 IGHG3P01860 377 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 APOC1P02654 83 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 CST2P09228 141 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 UCHL1P09936 223 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 OCMP0CE72 109 aaPredicted RBP3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 CPN1P15169 458 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 B4GALT1P15291 398 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 ANOS1P23352 680 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 AZGP1P25311 298 aaKnown RBP3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 CD40LGP29965 261 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 AGTR1P30556 359 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 TALDO1P37837 337 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 KIR3DL2P43630 455 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 HTR5AP47898 357 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 INPP1P49441 399 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 CCR9P51686 369 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 BMXP51813 675 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 PRKXP51817 358 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 ZNF133P52736 654 aaPredicted RBP3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 CRIP2P52943 208 aaPredicted RBP3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 CAV3P56539 151 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 ZNF121P58317 390 aaPredicted RBP3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 SEC61BP60468 96 aaKnown RBP3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 PCBD1P61457 104 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 MRPS34P82930 218 aaKnown RBP3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 GALK2Q01415 458 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 ZNF45Q02386 682 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 MFGE8Q08431 387 aaPredicted RBP3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 INSL4Q14641 139 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 RAB35Q15286 201 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 HIST3H3Q16695 136 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 PCK2Q16822 640 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 SLC36A2Q495M3 483 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 ELFN2Q5R3F8 820 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 PHYHD1Q5SRE7 291 aa3.26□□□□□ -1.89
HMGB3P20-201ENST00000417997 ZNF684Q5T5D7 378 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms