RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 IGHV3OR16-10A0A075B7F0 116 aa12□□□□□ -0.49
NIF3L1-205ENST00000409588 OR2AT4A6NND4 320 aa12□□□□□ -0.49
NIF3L1-205ENST00000409588 MITFO75030 526 aaPredicted RBP12□□□□□ -0.49
NIF3L1-205ENST00000409588 NOS1APO75052 506 aaPredicted RBP12□□□□□ -0.49
NIF3L1-205ENST00000409588 KRT8P05787 483 aa12□□□□□ -0.49
NIF3L1-205ENST00000409588 CRYBA1P05813 215 aa12□□□□□ -0.49
NIF3L1-205ENST00000409588 GLRA1P23415 457 aa12□□□□□ -0.49
NIF3L1-205ENST00000409588 HTR1FP30939 366 aa12□□□□□ -0.49
NIF3L1-205ENST00000409588 ATP6V1E1P36543 226 aa12□□□□□ -0.49
NIF3L1-205ENST00000409588 CDC42P60953 191 aa12□□□□□ -0.49
NIF3L1-205ENST00000409588 BLMHQ13867 455 aa12□□□□□ -0.49
NIF3L1-205ENST00000409588 DEFB112Q30KQ8 113 aa12□□□□□ -0.49
NIF3L1-205ENST00000409588 CLVS2Q5SYC1 327 aa12□□□□□ -0.49
NIF3L1-205ENST00000409588 BCL2L15Q5TBC7 163 aa12□□□□□ -0.49
NIF3L1-205ENST00000409588 BRD3OSQ6XYD6 125 aa12□□□□□ -0.49
NIF3L1-205ENST00000409588 MOB3CQ70IA8 216 aa12□□□□□ -0.49
NIF3L1-205ENST00000409588 KCTD20Q7Z5Y7 419 aa12□□□□□ -0.49
NIF3L1-205ENST00000409588 AMIGO2Q86SJ2 522 aa12□□□□□ -0.49
NIF3L1-205ENST00000409588 EGFL6Q8IUX8 553 aa12□□□□□ -0.49
NIF3L1-205ENST00000409588 SSMEM1Q8WWF3 244 aa12□□□□□ -0.49
NIF3L1-205ENST00000409588 IL4I1Q96RQ9 567 aa12□□□□□ -0.49
NIF3L1-205ENST00000409588 CIB1Q99828 191 aa12□□□□□ -0.49
NIF3L1-205ENST00000409588 PPP1R3EQ9H7J1 279 aa12□□□□□ -0.49
NIF3L1-205ENST00000409588 OR52A1Q9UKL2 312 aa12□□□□□ -0.49
NIF3L1-205ENST00000409588 COPS3Q9UNS2 423 aa12□□□□□ -0.49
NIF3L1-205ENST00000409588 POLDIP2Q9Y2S7 368 aa12□□□□□ -0.49
NIF3L1-205ENST00000409588 ORC6Q9Y5N6 252 aa12□□□□□ -0.49
NIF3L1-205ENST00000409588 MMP24Q9Y5R2 645 aa12□□□□□ -0.49
NIF3L1-205ENST00000409588 SNTNA6NMZ2 147 aa11.99□□□□□ -0.49
NIF3L1-205ENST00000409588 M0R1W7 72 aa11.99□□□□□ -0.49
NIF3L1-205ENST00000409588 PSMD9O00233 223 aa11.99□□□□□ -0.49
NIF3L1-205ENST00000409588 SIGLEC5O15389 551 aa11.99□□□□□ -0.49
NIF3L1-205ENST00000409588 HOXA3O43365 443 aaPredicted RBP11.99□□□□□ -0.49
NIF3L1-205ENST00000409588 AKR7A2O43488 359 aa11.99□□□□□ -0.49
NIF3L1-205ENST00000409588 SRSF10O75494 262 aaKnown RBP11.99□□□□□ -0.49
NIF3L1-205ENST00000409588 TTRP02766 147 aa11.99□□□□□ -0.49
NIF3L1-205ENST00000409588 SFTPBP07988 381 aa11.99□□□□□ -0.49
NIF3L1-205ENST00000409588 EEF1B2P24534 225 aaKnown RBP11.99□□□□□ -0.49
NIF3L1-205ENST00000409588 EPHA2P29317 976 aa11.99□□□□□ -0.49
NIF3L1-205ENST00000409588 HOXA4Q00056 320 aaPredicted RBP11.99□□□□□ -0.49
NIF3L1-205ENST00000409588 SLC25A30Q5SVS4 291 aa11.99□□□□□ -0.49
NIF3L1-205ENST00000409588 TMEM42Q69YG0 159 aa11.99□□□□□ -0.49
NIF3L1-205ENST00000409588 ZFP1Q6P2D0 407 aa11.99□□□□□ -0.49
NIF3L1-205ENST00000409588 PLEKHG7Q6ZR37 379 aa11.99□□□□□ -0.49
NIF3L1-205ENST00000409588 ASRGL1Q7L266 308 aa11.99□□□□□ -0.49
NIF3L1-205ENST00000409588 AQP3Q92482 292 aa11.99□□□□□ -0.49
NIF3L1-205ENST00000409588 C10orf35Q96D05 121 aa11.99□□□□□ -0.49
NIF3L1-205ENST00000409588 APOL4Q9BPW4 351 aa11.99□□□□□ -0.49
NIF3L1-205ENST00000409588 SLITRK2Q9H156 845 aa11.99□□□□□ -0.49
NIF3L1-205ENST00000409588 DPAGT1Q9H3H5 408 aa11.99□□□□□ -0.49
NIF3L1-205ENST00000409588 UNKLQ9H9P5 680 aaKnown RBP11.99□□□□□ -0.49
NIF3L1-205ENST00000409588 SLC25A10Q9UBX3 287 aaPredicted RBP11.99□□□□□ -0.49
NIF3L1-205ENST00000409588 OAZ3Q9UMX2 235 aa11.99□□□□□ -0.49
NIF3L1-205ENST00000409588 V9GYS6 101 aa11.99□□□□□ -0.49
NIF3L1-205ENST00000409588 TRBV23-1A0A0A0MS06 115 aa11.98□□□□□ -0.49
NIF3L1-205ENST00000409588 A0A1W2PPH5 198 aa11.98□□□□□ -0.49
NIF3L1-205ENST00000409588 METTL15A6NJ78 407 aa11.98□□□□□ -0.49
NIF3L1-205ENST00000409588 SERPINA3P01011 423 aa11.98□□□□□ -0.49
NIF3L1-205ENST00000409588 AMY2BP19961 511 aa11.98□□□□□ -0.49
NIF3L1-205ENST00000409588 CCL1P22362 96 aa11.98□□□□□ -0.49
NIF3L1-205ENST00000409588 IKZF1Q13422 519 aa11.98□□□□□ -0.49
NIF3L1-205ENST00000409588 SMIM21Q3B7S5 101 aa11.98□□□□□ -0.49
NIF3L1-205ENST00000409588 LINC01559Q495D7 138 aa11.98□□□□□ -0.49
NIF3L1-205ENST00000409588 CEP78Q5JTW2 689 aa11.98□□□□□ -0.49
NIF3L1-205ENST00000409588 MEDAGQ5VYS4 303 aa11.98□□□□□ -0.49
NIF3L1-205ENST00000409588 PLCXD3Q63HM9 321 aa11.98□□□□□ -0.49
NIF3L1-205ENST00000409588 NCR3LG1Q68D85 454 aa11.98□□□□□ -0.49
NIF3L1-205ENST00000409588 FAM216BQ8N7L0 139 aa11.98□□□□□ -0.49
NIF3L1-205ENST00000409588 OR5T2Q8NGG2 359 aa11.98□□□□□ -0.49
NIF3L1-205ENST00000409588 OR51G2Q8NGK0 314 aa11.98□□□□□ -0.49
NIF3L1-205ENST00000409588 DYRK2Q92630 601 aa11.98□□□□□ -0.49
NIF3L1-205ENST00000409588 LHX4Q969G2 390 aa11.98□□□□□ -0.49
NIF3L1-205ENST00000409588 SDSLQ96GA7 329 aa11.98□□□□□ -0.49
NIF3L1-205ENST00000409588 DUX5Q96PT3 197 aa11.98□□□□□ -0.49
NIF3L1-205ENST00000409588 ADI1Q9BV57 179 aa11.98□□□□□ -0.49
NIF3L1-205ENST00000409588 WDR13Q9H1Z4 485 aa11.98□□□□□ -0.49
NIF3L1-205ENST00000409588 METTL8Q9H825 291 aaKnown RBP11.98□□□□□ -0.49
NIF3L1-205ENST00000409588 MRM2Q9UI43 246 aaKnown RBP11.98□□□□□ -0.49
NIF3L1-205ENST00000409588 FAM96BQ9Y3D0 163 aa11.98□□□□□ -0.49
NIF3L1-205ENST00000409588 PCDHGB1Q9Y5G3 927 aa11.98□□□□□ -0.49
NIF3L1-205ENST00000409588 FCN3O75636 299 aa11.97□□□□□ -0.49
NIF3L1-205ENST00000409588 RPSAP08865 295 aaKnown RBP11.97□□□□□ -0.49
NIF3L1-205ENST00000409588 PSG2P11465 335 aa11.97□□□□□ -0.49
NIF3L1-205ENST00000409588 FAHP16930 419 aa11.97□□□□□ -0.49
NIF3L1-205ENST00000409588 HAGHLQ6PII5 290 aaPredicted RBP11.97□□□□□ -0.49
NIF3L1-205ENST00000409588 VMO1Q7Z5L0 202 aa11.97□□□□□ -0.49
NIF3L1-205ENST00000409588 BCDIN3DQ7Z5W3 292 aaKnown RBP11.97□□□□□ -0.49
NIF3L1-205ENST00000409588 LDLRAD3Q86YD5 345 aa11.97□□□□□ -0.49
NIF3L1-205ENST00000409588 ZNF561Q8N587 486 aa11.97□□□□□ -0.49
NIF3L1-205ENST00000409588 YIPF7Q8N8F6 280 aa11.97□□□□□ -0.49
NIF3L1-205ENST00000409588 POC1AQ8NBT0 407 aa11.97□□□□□ -0.49
NIF3L1-205ENST00000409588 OR5D13Q8NGL4 314 aa11.97□□□□□ -0.49
NIF3L1-205ENST00000409588 OR14K1Q8NGZ2 314 aa11.97□□□□□ -0.49
NIF3L1-205ENST00000409588 OR4F5Q8NH21 305 aa11.97□□□□□ -0.49
NIF3L1-205ENST00000409588 GAFA1Q96PS6 74 aa11.97□□□□□ -0.49
NIF3L1-205ENST00000409588 SEMA6AQ9H2E6 1030 aa11.97□□□□□ -0.49
NIF3L1-205ENST00000409588 ZNF696Q9H7X3 374 aa11.97□□□□□ -0.49
NIF3L1-205ENST00000409588 BEX1Q9HBH7 125 aa11.97□□□□□ -0.49
NIF3L1-205ENST00000409588 SNTG1Q9NSN8 517 aa11.97□□□□□ -0.49
NIF3L1-205ENST00000409588 ONECUT1Q9UBC0 465 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms