RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 A0A087X0M5 115 aa4.71□□□□□ -1.65
VPS41-203ENST00000395969 TRBV2A0A0J9YWF9 115 aa4.71□□□□□ -1.65
VPS41-203ENST00000395969 A0A0U1RQV5 110 aa4.71□□□□□ -1.65
VPS41-203ENST00000395969 A0A1B0GX30 115 aa4.71□□□□□ -1.65
VPS41-203ENST00000395969 hCG_1809904A0A1W2PP81 198 aa4.71□□□□□ -1.65
VPS41-203ENST00000395969 A0A1W2PR64 198 aa4.71□□□□□ -1.65
VPS41-203ENST00000395969 A0A1W2PRV1 198 aa4.71□□□□□ -1.65
VPS41-203ENST00000395969 CPED1A4D0V7 1026 aa4.71□□□□□ -1.65
VPS41-203ENST00000395969 OR2AT4A6NND4 320 aa4.71□□□□□ -1.65
VPS41-203ENST00000395969 RNASEK-C17orf49H0YIS7 233 aa4.71□□□□□ -1.65
VPS41-203ENST00000395969 H3BSH0 61 aa4.71□□□□□ -1.65
VPS41-203ENST00000395969 FCGR3AP08637 254 aa4.71□□□□□ -1.65
VPS41-203ENST00000395969 SNRPCP09234 159 aaKnown RBP4.71□□□□□ -1.65
VPS41-203ENST00000395969 CLUP10909 449 aa4.71□□□□□ -1.65
VPS41-203ENST00000395969 CPT2P23786 658 aa4.71□□□□□ -1.65
VPS41-203ENST00000395969 ITPKBP27987 946 aa4.71□□□□□ -1.65
VPS41-203ENST00000395969 CEACAM6P40199 344 aa4.71□□□□□ -1.65
VPS41-203ENST00000395969 TAF13Q15543 124 aa4.71□□□□□ -1.65
VPS41-203ENST00000395969 Q499Y3 187 aa4.71□□□□□ -1.65
VPS41-203ENST00000395969 KRTCAP3Q53RY4 240 aa4.71□□□□□ -1.65
VPS41-203ENST00000395969 IGFL3Q6UXB1 125 aa4.71□□□□□ -1.65
VPS41-203ENST00000395969 UNQ6126/PRO20091Q6UXV3 157 aa4.71□□□□□ -1.65
VPS41-203ENST00000395969 ASCL4Q6XD76 172 aa4.71□□□□□ -1.65
VPS41-203ENST00000395969 TMPPEQ6ZT21 453 aa4.71□□□□□ -1.65
VPS41-203ENST00000395969 SZRD1Q7Z422 152 aa4.71□□□□□ -1.65
VPS41-203ENST00000395969 GGNQ86UU5 652 aa4.71□□□□□ -1.65
VPS41-203ENST00000395969 ZNF417Q8TAU3 575 aa4.71□□□□□ -1.65
VPS41-203ENST00000395969 CT55Q8WUE5 264 aa4.71□□□□□ -1.65
VPS41-203ENST00000395969 ZNRF4Q8WWF5 429 aa4.71□□□□□ -1.65
VPS41-203ENST00000395969 FOXRED1Q96CU9 486 aaPredicted RBP4.71□□□□□ -1.65
VPS41-203ENST00000395969 RAB3CQ96E17 227 aa4.71□□□□□ -1.65
VPS41-203ENST00000395969 INTS14Q96SY0 518 aa4.71□□□□□ -1.65
VPS41-203ENST00000395969 PDCD1LG2Q9BQ51 273 aa4.71□□□□□ -1.65
VPS41-203ENST00000395969 SLC25A21Q9BQT8 299 aaPredicted RBP4.71□□□□□ -1.65
VPS41-203ENST00000395969 NRSN2Q9GZP1 204 aa4.71□□□□□ -1.65
VPS41-203ENST00000395969 SLC25A18Q9H1K4 315 aa4.71□□□□□ -1.65
VPS41-203ENST00000395969 G6PC2Q9NQR9 355 aa4.71□□□□□ -1.65
VPS41-203ENST00000395969 COMMD9Q9P000 198 aa4.71□□□□□ -1.65
VPS41-203ENST00000395969 UPB1Q9UBR1 384 aa4.71□□□□□ -1.65
VPS41-203ENST00000395969 PADI1Q9ULC6 663 aa4.71□□□□□ -1.65
VPS41-203ENST00000395969 R4GMQ9 66 aa4.71□□□□□ -1.65
VPS41-203ENST00000395969 PRR32B1ATL7 298 aa4.71□□□□□ -1.66
VPS41-203ENST00000395969 MAGEB4O15481 346 aaPredicted RBP4.71□□□□□ -1.66
VPS41-203ENST00000395969 CYTIPO60759 359 aa4.71□□□□□ -1.66
VPS41-203ENST00000395969 MED6O75586 246 aa4.71□□□□□ -1.66
VPS41-203ENST00000395969 STK17BO94768 372 aa4.71□□□□□ -1.66
VPS41-203ENST00000395969 IGHG3P01860 377 aa4.71□□□□□ -1.66
VPS41-203ENST00000395969 CD3DP04234 171 aa4.71□□□□□ -1.66
VPS41-203ENST00000395969 CD2P06729 351 aa4.71□□□□□ -1.66
VPS41-203ENST00000395969 HIST1H1BP16401 226 aaKnown RBP4.71□□□□□ -1.66
VPS41-203ENST00000395969 GRPRP30550 384 aa4.71□□□□□ -1.66
VPS41-203ENST00000395969 AQP2P41181 271 aa4.71□□□□□ -1.66
VPS41-203ENST00000395969 GLP1RP43220 463 aa4.71□□□□□ -1.66
VPS41-203ENST00000395969 CDX1P47902 265 aaPredicted RBP4.71□□□□□ -1.66
VPS41-203ENST00000395969 CTXN1P60606 82 aa4.71□□□□□ -1.66
VPS41-203ENST00000395969 RAC3P60763 192 aa4.71□□□□□ -1.66
VPS41-203ENST00000395969 CSNK2A1P68400 391 aaPredicted RBP4.71□□□□□ -1.66
VPS41-203ENST00000395969 HSF1Q00613 529 aa4.71□□□□□ -1.66
VPS41-203ENST00000395969 DNAH14Q0VDD8 3507 aa4.71□□□□□ -1.66
VPS41-203ENST00000395969 AIMP2Q13155 320 aaKnown RBP4.71□□□□□ -1.66
VPS41-203ENST00000395969 DHRS2Q13268 280 aa4.71□□□□□ -1.66
VPS41-203ENST00000395969 ACKR1Q16570 336 aa4.71□□□□□ -1.66
VPS41-203ENST00000395969 ANKRD16Q6P6B7 361 aa4.71□□□□□ -1.66
VPS41-203ENST00000395969 STAC2Q6ZMT1 411 aa4.71□□□□□ -1.66
VPS41-203ENST00000395969 FAM219AQ8IW50 185 aa4.71□□□□□ -1.66
VPS41-203ENST00000395969 OR52N5Q8NH56 324 aa4.71□□□□□ -1.66
VPS41-203ENST00000395969 RNASE11Q8TAA1 199 aaKnown RBP4.71□□□□□ -1.66
VPS41-203ENST00000395969 NABP1Q96AH0 204 aa4.71□□□□□ -1.66
VPS41-203ENST00000395969 SLC25A44Q96H78 314 aaPredicted RBP4.71□□□□□ -1.66
VPS41-203ENST00000395969 YPEL4Q96NS1 127 aa4.71□□□□□ -1.66
VPS41-203ENST00000395969 OR5B2Q96R09 309 aa4.71□□□□□ -1.66
VPS41-203ENST00000395969 SOX7Q9BT81 388 aa4.71□□□□□ -1.66
VPS41-203ENST00000395969 PTGES2Q9H7Z7 377 aa4.71□□□□□ -1.66
VPS41-203ENST00000395969 BCO1Q9HAY6 547 aa4.71□□□□□ -1.66
VPS41-203ENST00000395969 TMEM9BQ9NQ34 198 aa4.71□□□□□ -1.66
VPS41-203ENST00000395969 FAM206AQ9NX38 181 aa4.71□□□□□ -1.66
VPS41-203ENST00000395969 STEAP1Q9UHE8 339 aa4.71□□□□□ -1.66
VPS41-203ENST00000395969 TUBD1Q9UJT1 453 aa4.71□□□□□ -1.66
VPS41-203ENST00000395969 FARSAQ9Y285 508 aaKnown RBP4.71□□□□□ -1.66
VPS41-203ENST00000395969 POMT1Q9Y6A1 747 aa4.71□□□□□ -1.66
VPS41-203ENST00000395969 PI4KAP42356 2102 aa4.71□□□□□ -1.66
VPS41-203ENST00000395969 MEGF11A6BM72 1044 aa4.71□□□□□ -1.66
VPS41-203ENST00000395969 C9JQL5 133 aa4.71□□□□□ -1.66
VPS41-203ENST00000395969 SCGNO76038 276 aa4.71□□□□□ -1.66
VPS41-203ENST00000395969 MT-CO3P00414 261 aa4.71□□□□□ -1.66
VPS41-203ENST00000395969 SNRNP70P08621 437 aaKnown RBP4.71□□□□□ -1.66
VPS41-203ENST00000395969 ZNF735P0CB33 412 aa4.71□□□□□ -1.66
VPS41-203ENST00000395969 LIPCP11150 499 aa4.71□□□□□ -1.66
VPS41-203ENST00000395969 GTF2F2P13984 249 aa4.71□□□□□ -1.66
VPS41-203ENST00000395969 ADRA2CP18825 462 aa4.71□□□□□ -1.66
VPS41-203ENST00000395969 ZNF41P51814 821 aaPredicted RBP4.71□□□□□ -1.66
VPS41-203ENST00000395969 FBXW4P57775 412 aa4.71□□□□□ -1.66
VPS41-203ENST00000395969 GLO1Q04760 184 aa4.71□□□□□ -1.66
VPS41-203ENST00000395969 SRSF5Q13243 272 aaKnown RBP4.71□□□□□ -1.66
VPS41-203ENST00000395969 HMGN3Q15651 99 aa4.71□□□□□ -1.66
VPS41-203ENST00000395969 SLC18B1Q6NT16 456 aa4.71□□□□□ -1.66
VPS41-203ENST00000395969 STEAP1BQ6NZ63 245 aa4.71□□□□□ -1.66
VPS41-203ENST00000395969 DHRS11Q6UWP2 260 aa4.71□□□□□ -1.66
VPS41-203ENST00000395969 MOGAT3Q86VF5 341 aa4.71□□□□□ -1.66
VPS41-203ENST00000395969 GALNT16Q8N428 558 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms