RNA–Protein interactions for RNA: ENST00000395145.3

CLDN3-201, Transcript of claudin 3, humanhuman

APPRIS P1 BASIC

Gene CLDN3, Length 1,274 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3-201ENST00000395145 GATBO75879 557 aaKnown RBP17.05■□□□□ 0.32
CLDN3-201ENST00000395145 C21orf33P30042 268 aaPredicted RBP17.05■□□□□ 0.32
CLDN3-201ENST00000395145 CDK5R1Q15078 307 aa17.05■□□□□ 0.32
CLDN3-201ENST00000395145 UBE2V2Q15819 145 aa17.05■□□□□ 0.32
CLDN3-201ENST00000395145 RNLSQ5VYX0 342 aa17.05■□□□□ 0.32
CLDN3-201ENST00000395145 SFRP4Q6FHJ7 346 aaPredicted RBP17.05■□□□□ 0.32
CLDN3-201ENST00000395145 XAF1Q6GPH4 301 aa17.05■□□□□ 0.32
CLDN3-201ENST00000395145 UTS2BQ765I0 119 aa17.05■□□□□ 0.32
CLDN3-201ENST00000395145 BOLLQ8N9W6 283 aaKnown RBP17.05■□□□□ 0.32
CLDN3-201ENST00000395145 OR51A4Q8NGJ6 313 aa17.05■□□□□ 0.32
CLDN3-201ENST00000395145 AQP3Q92482 292 aa17.05■□□□□ 0.32
CLDN3-201ENST00000395145 LPAR2Q9HBW0 351 aa17.05■□□□□ 0.32
CLDN3-201ENST00000395145 SCN3BQ9NY72 215 aa17.05■□□□□ 0.32
CLDN3-201ENST00000395145 POLR3KQ9Y2Y1 108 aaPredicted RBP17.05■□□□□ 0.32
CLDN3-201ENST00000395145 C3orf80F5H4A9 247 aa17.04■□□□□ 0.32
CLDN3-201ENST00000395145 OGG1O15527 345 aa17.04■□□□□ 0.32
CLDN3-201ENST00000395145 NDUFA2O43678 99 aa17.04■□□□□ 0.32
CLDN3-201ENST00000395145 CRLF1O75462 422 aa17.04■□□□□ 0.32
CLDN3-201ENST00000395145 FOXH1O75593 365 aa17.04■□□□□ 0.32
CLDN3-201ENST00000395145 SERPINA3P01011 423 aa17.04■□□□□ 0.32
CLDN3-201ENST00000395145 CDK1P06493 297 aa17.04■□□□□ 0.32
CLDN3-201ENST00000395145 RPS2P15880 293 aaKnown RBP17.04■□□□□ 0.32
CLDN3-201ENST00000395145 MUC1P15941 1255 aaPredicted RBP17.04■□□□□ 0.32
CLDN3-201ENST00000395145 PCMT1P22061 227 aa17.04■□□□□ 0.32
CLDN3-201ENST00000395145 FAM90A1Q86YD7 464 aa17.04■□□□□ 0.32
CLDN3-201ENST00000395145 ZNF573Q86YE8 665 aa17.04■□□□□ 0.32
CLDN3-201ENST00000395145 DEFB108BQ8NET1 73 aa17.04■□□□□ 0.32
CLDN3-201ENST00000395145 OR13C3Q8NGS6 347 aa17.04■□□□□ 0.32
CLDN3-201ENST00000395145 GATAD2BQ8WXI9 593 aa17.04■□□□□ 0.32
CLDN3-201ENST00000395145 FGGYQ96C11 551 aa17.04■□□□□ 0.32
CLDN3-201ENST00000395145 NEIL1Q96FI4 390 aaPredicted RBP17.04■□□□□ 0.32
CLDN3-201ENST00000395145 PDCD1LG2Q9BQ51 273 aa17.04■□□□□ 0.32
CLDN3-201ENST00000395145 HIF1ANQ9NWT6 349 aa17.04■□□□□ 0.32
CLDN3-201ENST00000395145 ERVK-18Q9QC07 812 aa17.04■□□□□ 0.32
CLDN3-201ENST00000395145 SLC7A11Q9UPY5 501 aa17.04■□□□□ 0.32
CLDN3-201ENST00000395145 ARHGAP32A7KAX9 2087 aa17.04■□□□□ 0.32
CLDN3-201ENST00000395145 PPIAL4CA0A0B4J2A2 164 aa17.03■□□□□ 0.32
CLDN3-201ENST00000395145 J3QT63 122 aa17.03■□□□□ 0.32
CLDN3-201ENST00000395145 RHBDL1O75783 438 aa17.03■□□□□ 0.32
CLDN3-201ENST00000395145 LALBAP00709 142 aa17.03■□□□□ 0.32
CLDN3-201ENST00000395145 ZNF20P17024 532 aa17.03■□□□□ 0.32
CLDN3-201ENST00000395145 ZFP36P26651 326 aaKnown RBP17.03■□□□□ 0.32
CLDN3-201ENST00000395145 SEC61A1P61619 476 aaKnown RBP17.03■□□□□ 0.32
CLDN3-201ENST00000395145 SLC35A2P78381 396 aa17.03■□□□□ 0.32
CLDN3-201ENST00000395145 MICBQ29980 383 aa17.03■□□□□ 0.32
CLDN3-201ENST00000395145 ESCO2Q56NI9 601 aa17.03■□□□□ 0.32
CLDN3-201ENST00000395145 HAGHLQ6PII5 290 aaPredicted RBP17.03■□□□□ 0.32
CLDN3-201ENST00000395145 NLRC3Q7RTR2 1065 aa17.03■□□□□ 0.32
CLDN3-201ENST00000395145 OR8B3Q8NGG8 313 aa17.03■□□□□ 0.32
CLDN3-201ENST00000395145 ZNF671Q8TAW3 534 aa17.03■□□□□ 0.32
CLDN3-201ENST00000395145 MYDGFQ969H8 173 aa17.03■□□□□ 0.32
CLDN3-201ENST00000395145 C12orf43Q96C57 262 aaKnown RBP17.03■□□□□ 0.32
CLDN3-201ENST00000395145 SMIM19Q96E16 107 aa17.03■□□□□ 0.32
CLDN3-201ENST00000395145 OR8B2Q96RD0 313 aa17.03■□□□□ 0.32
CLDN3-201ENST00000395145 SIRT4Q9Y6E7 314 aaPredicted RBP17.03■□□□□ 0.32
CLDN3-201ENST00000395145 KIAA1324LA8MWY0 1029 aaPredicted RBP17.02■□□□□ 0.32
CLDN3-201ENST00000395145 MYL12BO14950 172 aa17.02■□□□□ 0.32
CLDN3-201ENST00000395145 HOXB4P17483 251 aaPredicted RBP17.02■□□□□ 0.32
CLDN3-201ENST00000395145 MPZP25189 248 aa17.02■□□□□ 0.32
CLDN3-201ENST00000395145 HAAOP46952 286 aa17.02■□□□□ 0.32
CLDN3-201ENST00000395145 FUT6P51993 359 aa17.02■□□□□ 0.32
CLDN3-201ENST00000395145 WNT4P56705 351 aa17.02■□□□□ 0.32
CLDN3-201ENST00000395145 TAS2R43P59537 309 aa17.02■□□□□ 0.32
CLDN3-201ENST00000395145 LCN2P80188 198 aa17.02■□□□□ 0.32
CLDN3-201ENST00000395145 CNN3Q15417 329 aaKnown RBP17.02■□□□□ 0.32
CLDN3-201ENST00000395145 CR1LQ2VPA4 569 aa17.02■□□□□ 0.32
CLDN3-201ENST00000395145 LYPD2Q6UXB3 125 aa17.02■□□□□ 0.32
CLDN3-201ENST00000395145 NANOGP1Q8N7R0 232 aa17.02■□□□□ 0.32
CLDN3-201ENST00000395145 DNAAF1Q8NEP3 725 aa17.02■□□□□ 0.32
CLDN3-201ENST00000395145 ZNF184Q99676 751 aaPredicted RBP17.02■□□□□ 0.32
CLDN3-201ENST00000395145 SSBP3Q9BWW4 388 aaPredicted RBP17.02■□□□□ 0.32
CLDN3-201ENST00000395145 CDCA4Q9BXL8 241 aa17.02■□□□□ 0.32
CLDN3-201ENST00000395145 DUSP21Q9H596 190 aa17.02■□□□□ 0.32
CLDN3-201ENST00000395145 PAK1IP1Q9NWT1 392 aaPredicted RBP17.02■□□□□ 0.32
CLDN3-201ENST00000395145 LPAR3Q9UBY5 353 aa17.02■□□□□ 0.32
CLDN3-201ENST00000395145 CDC42EP3Q9UKI2 254 aa17.02■□□□□ 0.32
CLDN3-201ENST00000395145 TPRKBQ9Y3C4 175 aa17.02■□□□□ 0.32
CLDN3-201ENST00000395145 IGKV1-9A0A0C4DH69 117 aa17.01■□□□□ 0.31
CLDN3-201ENST00000395145 PTGES3LE9PB15 166 aa17.01■□□□□ 0.31
CLDN3-201ENST00000395145 AKR7A2O43488 359 aa17.01■□□□□ 0.31
CLDN3-201ENST00000395145 GYPAP02724 150 aa17.01■□□□□ 0.31
CLDN3-201ENST00000395145 GATA3P23771 443 aa17.01■□□□□ 0.31
CLDN3-201ENST00000395145 PITPNBP48739 271 aa17.01■□□□□ 0.31
CLDN3-201ENST00000395145 DMKNQ6E0U4 476 aaPredicted RBP17.01■□□□□ 0.31
CLDN3-201ENST00000395145 ZNF841Q6ZN19 808 aa17.01■□□□□ 0.31
CLDN3-201ENST00000395145 PARP16Q8N5Y8 322 aa17.01■□□□□ 0.31
CLDN3-201ENST00000395145 TRMT10AQ8TBZ6 339 aaKnown RBP17.01■□□□□ 0.31
CLDN3-201ENST00000395145 RGP1Q92546 391 aaPredicted RBP17.01■□□□□ 0.31
CLDN3-201ENST00000395145 CNBD2Q96M20 576 aa17.01■□□□□ 0.31
CLDN3-201ENST00000395145 PKIBQ9C010 78 aa17.01■□□□□ 0.31
CLDN3-201ENST00000395145 KAAG1Q9UBP8 84 aa17.01■□□□□ 0.31
CLDN3-201ENST00000395145 ERGIC3Q9Y282 383 aa17.01■□□□□ 0.31
CLDN3-201ENST00000395145 PCDHGB5Q9Y5G0 923 aa17.01■□□□□ 0.31
CLDN3-201ENST00000395145 SVEP1Q4LDE5 3571 aa17.01■□□□□ 0.31
CLDN3-201ENST00000395145 IGHV3OR15-7A0A075B7D8 119 aa17■□□□□ 0.31
CLDN3-201ENST00000395145 FAM230AA0A1W2PPH8 454 aa17■□□□□ 0.31
CLDN3-201ENST00000395145 NOS1APO75052 506 aaPredicted RBP17■□□□□ 0.31
CLDN3-201ENST00000395145 ALX3O95076 343 aa17■□□□□ 0.31
CLDN3-201ENST00000395145 MT-ND2P03891 347 aa17■□□□□ 0.31
CLDN3-201ENST00000395145 ACAA1P09110 424 aaPredicted RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms