RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Tbrg1Q3UB74 406 aa14.06□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Peli1Q8C669 418 aa14.06□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 DctdQ8K2D6 178 aa14.06□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Olfr1297Q8VGE8 312 aa14.06□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Rpusd4Q9CWX4 377 aaKnown RBP14.06□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Prr14lE9Q7C4 1971 aa14.06□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Znf551B2RUI1 696 aa14.05□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Gm10271F6WY25 52 aa14.05□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Znf271P15620 580 aa14.05□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Ube2mP61082 183 aaKnown RBP14.05□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 TepsinQ3U3N6 573 aa14.05□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Pdlim5Q8CI51 591 aaKnown RBP14.05□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Olfr1284Q8VF29 311 aa14.05□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Plscr3Q9JIZ9 296 aa14.05□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 P2rx4Q9JJX6 388 aa14.05□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Apc2Q9Z1K7 2274 aa14.05□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Olfr65A0A1B0GSF4 315 aa14.05□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Olfr588-ps1A0A1B0GSZ2 313 aa14.05□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Gm6880A3KG45 208 aa14.05□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 I0C0044D17RikA6PWL3 169 aa14.05□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Vmn2r16E9Q025 850 aa14.05□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Ccdc74aE9Q9U8 364 aa14.05□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Olfr323Q5NCD0 323 aa14.05□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Olfr843Q7TRG4 313 aa14.05□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Olfr429Q7TRW1 312 aa14.05□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Zfp819Q80V81 607 aa14.05□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Olfr1377Q8VGH1 307 aa14.05□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Magt1Q9CQY5 335 aa14.05□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Gm13090A2A899 111 aa14.05□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Rnf148G3X9R7 316 aa14.05□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Fcn2O70497 314 aa14.05□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 FstP47931 344 aa14.05□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Gpr85P60894 370 aa14.05□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 N4bp2l1Q3V2Q8 238 aa14.05□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Kcnip4Q6PHZ8 250 aa14.05□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Olfr1087Q7TR63 313 aa14.05□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Olfr58Q7TRF6 309 aa14.05□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Krtcap3Q8K177 240 aa14.05□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 V1ra11Q8R2E6 318 aa14.05□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Asb13Q8VBX0 278 aa14.05□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Olfr1449Q8VEV8 314 aa14.05□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Vmn1r45Q8VIC7 318 aa14.05□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Olfr642Q924X8 314 aa14.05□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Ndufb10Q9DCS9 176 aa14.05□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Spta1P08032 2415 aa14.05□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 9930021J03RikH3BKP8 2027 aa14.05□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Srsf5O35326 269 aaKnown RBP14.05□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 BlkP16277 499 aa14.05□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Il2rgP34902 369 aa14.05□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 HfeP70387 359 aa14.05□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Sdhaf4Q8BTE0 104 aa14.05□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Cyb5bQ9CQX2 146 aaKnown RBP14.05□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Lhx9Q9WUH2 397 aa14.05□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Cd101A8E0Y8 1033 aa14.04□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Zfp961E9Q4R5 444 aa14.04□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Amy1P00687 511 aa14.04□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 RidaP52760 135 aa14.04□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Elavl2Q60899 360 aaKnown RBP14.04□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 MaoaQ64133 526 aa14.04□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Sidt1Q6AXF6 827 aa14.04□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Amdhd2Q8JZV7 409 aa14.04□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Cadm4Q8R464 388 aa14.04□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Lcn8Q924P3 175 aa14.04□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Hint2Q9D0S9 163 aa14.04□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Olfr1532-ps1A0A0R4J8U2 307 aa14.04□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 CatsperdE9Q9F6 805 aa14.04□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Olfr707K7N662 307 aa14.04□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Rab22aP35285 194 aa14.04□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Olfr125Q14AJ9 320 aa14.04□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Taar8bQ5QD06 344 aa14.04□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 NcmapQ99JS0 100 aa14.04□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 CmipQ9D486 773 aa14.04□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Fam166aQ9D4K5 319 aa14.04□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Q9D9C7 252 aa14.04□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Mmp1aQ9EPL5 464 aa14.04□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Izumo1rQ9EQF4 244 aa14.04□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Morn1A2RTS7 477 aa14.04□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 5430403G16RikD3Z5L4 667 aa14.04□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Ccdc71lE9Q4T4 218 aa14.04□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Olfr608E9Q564 316 aa14.04□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Cnep1r1Q3UJ81 125 aa14.04□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Lhfpl5Q4KL25 219 aa14.04□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Ip6k3Q8BWD2 396 aa14.04□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Mef2cQ8CFN5 474 aa14.04□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Upp2Q8CGR7 320 aa14.04□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Olfr1141Q8VFQ7 311 aa14.04□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Olfr969Q8VG89 311 aa14.04□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Gpx6Q91WR8 221 aa14.04□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Sorcs2Q9EPR5 1159 aa14.04□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Nkain4Q9JMG4 208 aa14.04□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 MvkQ9R008 395 aa14.04□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Rgs11Q9Z2H1 443 aa14.04□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Arid2E9Q7E2 1828 aa14.04□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Adamtsl5D3Z689 485 aa14.04□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 EnsaP60840 121 aa14.04□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Rasd2P63032 266 aa14.04□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 FuzQ3UYI6 415 aa14.04□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Vezf1Q5SXC4 518 aa14.04□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Scarb1Q61009 509 aa14.04□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Olfr1216Q7TR05 311 aa14.04□□□□□ -0.16
Retrieved 100 of 22,080 RNA–protein pairs in 71.3 ms