RNA–Protein interactions for RNA: ENST00000624887.1

PCDHB11-202, Transcript of protocadherin beta 11, humanhuman

TSL 2 BASIC

Gene PCDHB11, Length 1,973 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-202ENST00000624887 GPR173Q9NS66 373 aa17.17■□□□□ 0.34
PCDHB11-202ENST00000624887 VSIG4Q9Y279 399 aa17.17■□□□□ 0.34
PCDHB11-202ENST00000624887 OR6C65A6NJZ3 312 aa17.17■□□□□ 0.34
PCDHB11-202ENST00000624887 GOSR2O14653 212 aa17.17■□□□□ 0.34
PCDHB11-202ENST00000624887 RAD51DO75771 328 aa17.17■□□□□ 0.34
PCDHB11-202ENST00000624887 CD46P15529 392 aa17.17■□□□□ 0.34
PCDHB11-202ENST00000624887 PPIAP62937 165 aaKnown RBP17.17■□□□□ 0.34
PCDHB11-202ENST00000624887 TEX261Q6UWH6 196 aa17.17■□□□□ 0.34
PCDHB11-202ENST00000624887 ZFP62Q8NB50 900 aaPredicted RBP17.17■□□□□ 0.34
PCDHB11-202ENST00000624887 WDR89Q96FK6 387 aaPredicted RBP17.17■□□□□ 0.34
PCDHB11-202ENST00000624887 OCSTAMPQ9BR26 566 aa17.17■□□□□ 0.34
PCDHB11-202ENST00000624887 ACKR4Q9NPB9 350 aa17.17■□□□□ 0.34
PCDHB11-202ENST00000624887 U3KQ87 197 aa17.17■□□□□ 0.34
PCDHB11-202ENST00000624887 PLSCR5A0PG75 271 aa17.16■□□□□ 0.34
PCDHB11-202ENST00000624887 ZNF724A8MTY0 619 aa17.16■□□□□ 0.34
PCDHB11-202ENST00000624887 TPD52L2O43399 206 aaKnown RBP17.16■□□□□ 0.34
PCDHB11-202ENST00000624887 SIX6O95475 246 aa17.16■□□□□ 0.34
PCDHB11-202ENST00000624887 SERPINA2P20848 420 aa17.16■□□□□ 0.34
PCDHB11-202ENST00000624887 TGIF1Q15583 401 aa17.16■□□□□ 0.34
PCDHB11-202ENST00000624887 RFPL4BQ6ZWI9 263 aa17.16■□□□□ 0.34
PCDHB11-202ENST00000624887 CCDC28AQ8IWP9 274 aa17.16■□□□□ 0.34
PCDHB11-202ENST00000624887 ZNF100Q8IYN0 542 aa17.16■□□□□ 0.34
PCDHB11-202ENST00000624887 C12orf45Q8N5I9 185 aaPredicted RBP17.16■□□□□ 0.34
PCDHB11-202ENST00000624887 OR10K1Q8NGX5 313 aa17.16■□□□□ 0.34
PCDHB11-202ENST00000624887 OR4K15Q8NH41 348 aa17.16■□□□□ 0.34
PCDHB11-202ENST00000624887 ASB13Q8WXK3 278 aa17.16■□□□□ 0.34
PCDHB11-202ENST00000624887 CALHM2Q9HA72 323 aa17.16■□□□□ 0.34
PCDHB11-202ENST00000624887 B3GNT2Q9NY97 397 aa17.16■□□□□ 0.34
PCDHB11-202ENST00000624887 ATPIF1Q9UII2 106 aa17.16■□□□□ 0.34
PCDHB11-202ENST00000624887 ARGFXA6NJG6 315 aa17.15■□□□□ 0.34
PCDHB11-202ENST00000624887 F5H5P2 479 aa17.15■□□□□ 0.34
PCDHB11-202ENST00000624887 SNAPC5O75971 98 aa17.15■□□□□ 0.34
PCDHB11-202ENST00000624887 RGS11O94810 467 aa17.15■□□□□ 0.34
PCDHB11-202ENST00000624887 IFNA6P05013 189 aa17.15■□□□□ 0.34
PCDHB11-202ENST00000624887 SSTR2P30874 369 aa17.15■□□□□ 0.34
PCDHB11-202ENST00000624887 CBX5P45973 191 aa17.15■□□□□ 0.34
PCDHB11-202ENST00000624887 MTCP1P56278 107 aa17.15■□□□□ 0.34
PCDHB11-202ENST00000624887 ARF1P84077 181 aaKnown RBP17.15■□□□□ 0.34
PCDHB11-202ENST00000624887 CNN3Q15417 329 aaKnown RBP17.15■□□□□ 0.34
PCDHB11-202ENST00000624887 PABPC1L2AQ5JQF8 200 aa17.15■□□□□ 0.34
PCDHB11-202ENST00000624887 TMEM42Q69YG0 159 aa17.15■□□□□ 0.34
PCDHB11-202ENST00000624887 SLC25A42Q86VD7 318 aa17.15■□□□□ 0.34
PCDHB11-202ENST00000624887 CPNE2Q96FN4 548 aaPredicted RBP17.15■□□□□ 0.34
PCDHB11-202ENST00000624887 DHRS9Q9BPW9 319 aa17.15■□□□□ 0.34
PCDHB11-202ENST00000624887 PRRG4Q9BZD6 226 aa17.15■□□□□ 0.34
PCDHB11-202ENST00000624887 CDRT15L2A8MXV6 281 aa17.15■□□□□ 0.34
PCDHB11-202ENST00000624887 SHOXO15266 292 aa17.15■□□□□ 0.34
PCDHB11-202ENST00000624887 SLC22A5O76082 557 aa17.15■□□□□ 0.34
PCDHB11-202ENST00000624887 ACTL6AO96019 429 aa17.15■□□□□ 0.34
PCDHB11-202ENST00000624887 ZNF35P13682 527 aa17.15■□□□□ 0.34
PCDHB11-202ENST00000624887 PRKACBP22694 351 aa17.15■□□□□ 0.34
PCDHB11-202ENST00000624887 CPT2P23786 658 aa17.15■□□□□ 0.34
PCDHB11-202ENST00000624887 SOX8P57073 446 aa17.15■□□□□ 0.34
PCDHB11-202ENST00000624887 DHRS2Q13268 280 aa17.15■□□□□ 0.34
PCDHB11-202ENST00000624887 SLC10A1Q14973 349 aa17.15■□□□□ 0.34
PCDHB11-202ENST00000624887 SMUG1Q53HV7 270 aa17.15■□□□□ 0.34
PCDHB11-202ENST00000624887 ACTBL2Q562R1 376 aa17.15■□□□□ 0.34
PCDHB11-202ENST00000624887 ZNF407Q9C0G0 2248 aa17.14■□□□□ 0.33
PCDHB11-202ENST00000624887 hCG_38984A0A1B0GV85 526 aa17.14■□□□□ 0.33
PCDHB11-202ENST00000624887 ZNF587BE7ETH6 402 aa17.14■□□□□ 0.33
PCDHB11-202ENST00000624887 PMP2P02689 132 aa17.14■□□□□ 0.33
PCDHB11-202ENST00000624887 BLVRBP30043 206 aaPredicted RBP17.14■□□□□ 0.33
PCDHB11-202ENST00000624887 AP2S1P53680 142 aaPredicted RBP17.14■□□□□ 0.33
PCDHB11-202ENST00000624887 FAM3AP98173 230 aa17.14■□□□□ 0.33
PCDHB11-202ENST00000624887 GK2Q14410 553 aaPredicted RBP17.14■□□□□ 0.33
PCDHB11-202ENST00000624887 RNPS1Q15287 305 aaKnown RBP17.14■□□□□ 0.33
PCDHB11-202ENST00000624887 MICBQ29980 383 aa17.14■□□□□ 0.33
PCDHB11-202ENST00000624887 ESCO2Q56NI9 601 aa17.14■□□□□ 0.33
PCDHB11-202ENST00000624887 VAX1Q5SQQ9 334 aa17.14■□□□□ 0.33
PCDHB11-202ENST00000624887 CLVS2Q5SYC1 327 aa17.14■□□□□ 0.33
PCDHB11-202ENST00000624887 DCAF12L2Q5VW00 463 aa17.14■□□□□ 0.33
PCDHB11-202ENST00000624887 C17orf107Q6ZR85 190 aa17.14■□□□□ 0.33
PCDHB11-202ENST00000624887 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.14■□□□□ 0.33
PCDHB11-202ENST00000624887 CPEB3Q8NE35 698 aaKnown RBP17.14■□□□□ 0.33
PCDHB11-202ENST00000624887 ZNF680Q8NEM1 530 aa17.14■□□□□ 0.33
PCDHB11-202ENST00000624887 C1QTNF5Q9BXJ0 243 aa17.14■□□□□ 0.33
PCDHB11-202ENST00000624887 PRDM14Q9GZV8 571 aa17.14■□□□□ 0.33
PCDHB11-202ENST00000624887 ELL3Q9HB65 397 aaPredicted RBP17.14■□□□□ 0.33
PCDHB11-202ENST00000624887 TMA7Q9Y2S6 64 aaKnown RBP17.14■□□□□ 0.33
PCDHB11-202ENST00000624887 OR2AT4A6NND4 320 aa17.13■□□□□ 0.33
PCDHB11-202ENST00000624887 RRADP55042 308 aa17.13■□□□□ 0.33
PCDHB11-202ENST00000624887 ZNF92Q03936 586 aa17.13■□□□□ 0.33
PCDHB11-202ENST00000624887 ARFRP1Q13795 201 aa17.13■□□□□ 0.33
PCDHB11-202ENST00000624887 ARL6IP1Q15041 203 aa17.13■□□□□ 0.33
PCDHB11-202ENST00000624887 C11orf88Q6PI97 169 aa17.13■□□□□ 0.33
PCDHB11-202ENST00000624887 ST8SIA4Q92187 359 aa17.13■□□□□ 0.33
PCDHB11-202ENST00000624887 FBXW5Q969U6 566 aa17.13■□□□□ 0.33
PCDHB11-202ENST00000624887 PECRQ9BY49 303 aa17.13■□□□□ 0.33
PCDHB11-202ENST00000624887 FREM1Q5H8C1 2179 aa17.13■□□□□ 0.33
PCDHB11-202ENST00000624887 DNAJC13O75165 2243 aa17.13■□□□□ 0.33
PCDHB11-202ENST00000624887 LOC100509620A0A075B734 347 aa17.13■□□□□ 0.33
PCDHB11-202ENST00000624887 SERPINE3A8MV23 424 aa17.13■□□□□ 0.33
PCDHB11-202ENST00000624887 XRCC2O43543 280 aa17.13■□□□□ 0.33
PCDHB11-202ENST00000624887 TMEM225BP0DP42 221 aa17.13■□□□□ 0.33
PCDHB11-202ENST00000624887 OR8B8Q15620 311 aa17.13■□□□□ 0.33
PCDHB11-202ENST00000624887 GRK1Q15835 563 aa17.13■□□□□ 0.33
PCDHB11-202ENST00000624887 FAHD2BQ6P2I3 314 aaPredicted RBP17.13■□□□□ 0.33
PCDHB11-202ENST00000624887 SPSB4Q96A44 273 aa17.13■□□□□ 0.33
PCDHB11-202ENST00000624887 FAHD2AQ96GK7 314 aa17.13■□□□□ 0.33
PCDHB11-202ENST00000624887 CYYR1Q96J86 154 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms