RNA–Protein interactions for RNA: ENST00000621131.4

VPS29-212, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-212ENST00000621131 SERPINA3P01011 423 aa4.02□□□□□ -1.77
VPS29-212ENST00000621131 PTHP01270 115 aa4.02□□□□□ -1.77
VPS29-212ENST00000621131 BGLAPP02818 100 aa4.02□□□□□ -1.77
VPS29-212ENST00000621131 TACSTD2P09758 323 aa4.02□□□□□ -1.77
VPS29-212ENST00000621131 ASAH2BP0C7U1 165 aa4.02□□□□□ -1.77
VPS29-212ENST00000621131 CSRP1P21291 193 aaKnown RBP4.02□□□□□ -1.77
VPS29-212ENST00000621131 AHCYP23526 432 aa4.02□□□□□ -1.77
VPS29-212ENST00000621131 PAX7P23759 505 aa4.02□□□□□ -1.77
VPS29-212ENST00000621131 S100A5P33763 92 aa4.02□□□□□ -1.77
VPS29-212ENST00000621131 UGT2B10P36537 528 aa4.02□□□□□ -1.77
VPS29-212ENST00000621131 AQP2P41181 271 aa4.02□□□□□ -1.77
VPS29-212ENST00000621131 SOX3P41225 446 aa4.02□□□□□ -1.77
VPS29-212ENST00000621131 CASP3P42574 277 aa4.02□□□□□ -1.77
VPS29-212ENST00000621131 RGS6P49758 472 aa4.02□□□□□ -1.77
VPS29-212ENST00000621131 EFNA3P52797 238 aa4.02□□□□□ -1.77
VPS29-212ENST00000621131 GBX2P52951 348 aaPredicted RBP4.02□□□□□ -1.77
VPS29-212ENST00000621131 DSCR4P56555 118 aaPredicted RBP4.02□□□□□ -1.77
VPS29-212ENST00000621131 RIPPLY3P57055 190 aa4.02□□□□□ -1.77
VPS29-212ENST00000621131 RPS4XP62701 263 aaKnown RBP4.02□□□□□ -1.77
VPS29-212ENST00000621131 ERVK-25P63136 954 aa4.02□□□□□ -1.77
VPS29-212ENST00000621131 CYCSP99999 105 aaKnown RBP4.02□□□□□ -1.77
VPS29-212ENST00000621131 HSF2Q03933 536 aa4.02□□□□□ -1.77
VPS29-212ENST00000621131 RPL18Q07020 188 aaKnown RBP4.02□□□□□ -1.77
VPS29-212ENST00000621131 FOXF1Q12946 379 aa4.02□□□□□ -1.77
VPS29-212ENST00000621131 MRPL28Q13084 256 aaKnown RBP4.02□□□□□ -1.77
VPS29-212ENST00000621131 KRR1Q13601 381 aaKnown RBP4.02□□□□□ -1.77
VPS29-212ENST00000621131 CRMP1Q14194 572 aa4.02□□□□□ -1.77
VPS29-212ENST00000621131 TOMM20Q15388 145 aa4.02□□□□□ -1.77
VPS29-212ENST00000621131 ZNF791Q3KP31 576 aaPredicted RBP4.02□□□□□ -1.77
VPS29-212ENST00000621131 AADACL4Q5VUY2 407 aa4.02□□□□□ -1.77
VPS29-212ENST00000621131 LEG1Q6P5S2 330 aa4.02□□□□□ -1.77
VPS29-212ENST00000621131 CBLN3Q6UW01 205 aa4.02□□□□□ -1.77
VPS29-212ENST00000621131 APOOLQ6UXV4 268 aa4.02□□□□□ -1.77
VPS29-212ENST00000621131 PLCZ1Q86YW0 608 aa4.02□□□□□ -1.77
VPS29-212ENST00000621131 Q8NBF4 154 aa4.02□□□□□ -1.77
VPS29-212ENST00000621131 SLC37A3Q8NCC5 494 aa4.02□□□□□ -1.77
VPS29-212ENST00000621131 SDR9C7Q8NEX9 313 aa4.02□□□□□ -1.77
VPS29-212ENST00000621131 OR10H4Q8NGA5 316 aa4.02□□□□□ -1.77
VPS29-212ENST00000621131 OR10G3Q8NGC4 313 aa4.02□□□□□ -1.77
VPS29-212ENST00000621131 OR52E2Q8NGJ4 325 aa4.02□□□□□ -1.77
VPS29-212ENST00000621131 OR4K13Q8NH42 304 aa4.02□□□□□ -1.77
VPS29-212ENST00000621131 MFSD8Q8NHS3 518 aa4.02□□□□□ -1.77
VPS29-212ENST00000621131 FNDC8Q8TC99 324 aa4.02□□□□□ -1.77
VPS29-212ENST00000621131 RASL10AQ92737 203 aa4.02□□□□□ -1.77
VPS29-212ENST00000621131 IMMP1LQ96LU5 166 aa4.02□□□□□ -1.77
VPS29-212ENST00000621131 JSRP1Q96MG2 331 aaPredicted RBP4.02□□□□□ -1.77
VPS29-212ENST00000621131 COQ7Q99807 217 aa4.02□□□□□ -1.77
VPS29-212ENST00000621131 NAA11Q9BSU3 229 aaPredicted RBP4.02□□□□□ -1.77
VPS29-212ENST00000621131 URM1Q9BTM9 101 aaKnown RBP4.02□□□□□ -1.77
VPS29-212ENST00000621131 KATNB1Q9BVA0 655 aa4.02□□□□□ -1.77
VPS29-212ENST00000621131 ANGPTL4Q9BY76 406 aa4.02□□□□□ -1.77
VPS29-212ENST00000621131 POTEKPQ9BYX7 375 aa4.02□□□□□ -1.77
VPS29-212ENST00000621131 MMP27Q9H306 513 aa4.02□□□□□ -1.77
VPS29-212ENST00000621131 HMG20AQ9NP66 347 aa4.02□□□□□ -1.77
VPS29-212ENST00000621131 NDUFB11Q9NX14 153 aa4.02□□□□□ -1.77
VPS29-212ENST00000621131 MRPL39Q9NYK5 338 aaKnown RBP4.02□□□□□ -1.77
VPS29-212ENST00000621131 HAO2Q9NYQ3 351 aa4.02□□□□□ -1.77
VPS29-212ENST00000621131 CCDC59Q9P031 241 aaKnown RBP4.02□□□□□ -1.77
VPS29-212ENST00000621131 MED11Q9P086 117 aa4.02□□□□□ -1.77
VPS29-212ENST00000621131 CRNNQ9UBG3 495 aaPredicted RBP4.02□□□□□ -1.77
VPS29-212ENST00000621131 BOKQ9UMX3 212 aaPredicted RBP4.02□□□□□ -1.77
VPS29-212ENST00000621131 NPIPA1Q9UND3 350 aa4.02□□□□□ -1.77
VPS29-212ENST00000621131 CAB39Q9Y376 341 aaPredicted RBP4.02□□□□□ -1.77
VPS29-212ENST00000621131 TMEM14AQ9Y6G1 99 aa4.02□□□□□ -1.77
VPS29-212ENST00000621131 CSMD1Q96PZ7 3565 aa4.02□□□□□ -1.77
VPS29-212ENST00000621131 EXPH5Q8NEV8 1989 aa4.02□□□□□ -1.77
VPS29-212ENST00000621131 NIPBLQ6KC79 2804 aaeCLIP4.01□□□□□ -1.77
VPS29-212ENST00000621131 COL27A1Q8IZC6 1860 aaPredicted RBP4.01□□□□□ -1.77
VPS29-212ENST00000621131 F8P00451 2351 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 IGKV1D-42A0A075B6H8 117 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 A0A1W2PPW3 197 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 FAM183AA6NL82 134 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 C12orf71A8MTZ7 269 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 VGLL3A8MV65 326 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 CENPBD1B2RD01 187 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 CBR3O75828 277 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 CLPXO76031 633 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 GLCEO94923 617 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 SLC2A10O95528 541 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 TXNDC12O95881 172 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 IGHMP01871 453 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 HLA-DPB1P04440 258 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 LIPCP11150 499 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 HIST1H1CP16403 213 aaKnown RBP4.01□□□□□ -1.77
VPS29-212ENST00000621131 ZNF17P17021 662 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 SPI1P17947 270 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 F8A1P23610 371 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 GADD45AP24522 165 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 MYL9P24844 172 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 DPP4P27487 766 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 CRABP1P29762 137 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 GRPRP30550 384 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 ACVR1BP36896 505 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 CYB561P49447 251 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 ETV1P50549 477 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 NOVA1P51513 510 aaKnown RBP4.01□□□□□ -1.77
VPS29-212ENST00000621131 SLC25A1P53007 311 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 OR2B6P58173 313 aa4.01□□□□□ -1.77
VPS29-212ENST00000621131 RPL27P61353 136 aaKnown RBP4.01□□□□□ -1.77
VPS29-212ENST00000621131 VBP1P61758 197 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 86.9 ms