RNA–Protein interactions for RNA: ENST00000617482.4

C11orf54-215, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3 BASIC

Gene C11orf54, Length 2,417 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-215ENST00000617482 KCNMB1Q16558 191 aa10.36□□□□□ -0.75
C11orf54-215ENST00000617482 PABPC1L2AQ5JQF8 200 aa10.36□□□□□ -0.75
C11orf54-215ENST00000617482 PEG10Q86TG7 708 aaKnown RBP10.36□□□□□ -0.75
C11orf54-215ENST00000617482 LHFPL1Q86WI0 220 aa10.36□□□□□ -0.75
C11orf54-215ENST00000617482 FAM89BQ8N5H3 189 aa10.36□□□□□ -0.75
C11orf54-215ENST00000617482 PIGTQ969N2 578 aa10.36□□□□□ -0.75
C11orf54-215ENST00000617482 ZNF775Q96BV0 537 aaPredicted RBP10.36□□□□□ -0.75
C11orf54-215ENST00000617482 INTS12Q96CB8 462 aaKnown RBP10.36□□□□□ -0.75
C11orf54-215ENST00000617482 ZNF385AQ96PM9 386 aaKnown RBP10.36□□□□□ -0.75
C11orf54-215ENST00000617482 FSCN3Q9NQT6 498 aa10.36□□□□□ -0.75
C11orf54-215ENST00000617482 MRPS17Q9Y2R5 130 aaKnown RBP10.36□□□□□ -0.75
C11orf54-215ENST00000617482 CCDC163A0A0D9SF12 145 aa10.35□□□□□ -0.75
C11orf54-215ENST00000617482 F8W036 122 aa10.35□□□□□ -0.75
C11orf54-215ENST00000617482 TOX3O15405 576 aaPredicted RBP10.35□□□□□ -0.75
C11orf54-215ENST00000617482 FAM157CP0CG43 387 aa10.35□□□□□ -0.75
C11orf54-215ENST00000617482 BLOC1S1P78537 153 aa10.35□□□□□ -0.75
C11orf54-215ENST00000617482 CHRFAM7AQ494W8 412 aa10.35□□□□□ -0.75
C11orf54-215ENST00000617482 PRSS54Q6PEW0 395 aa10.35□□□□□ -0.75
C11orf54-215ENST00000617482 C6orf201Q7Z4U5 140 aa10.35□□□□□ -0.75
C11orf54-215ENST00000617482 LDLRAD3Q86YD5 345 aa10.35□□□□□ -0.75
C11orf54-215ENST00000617482 TDHQ8IZJ6 230 aa10.35□□□□□ -0.75
C11orf54-215ENST00000617482 SCGB3A2Q96PL1 93 aa10.35□□□□□ -0.75
C11orf54-215ENST00000617482 S100A13Q99584 98 aa10.35□□□□□ -0.75
C11orf54-215ENST00000617482 RBM24Q9BX46 236 aaKnown RBP10.35□□□□□ -0.75
C11orf54-215ENST00000617482 PECRQ9BY49 303 aa10.35□□□□□ -0.75
C11orf54-215ENST00000617482 TLNRD1Q9H1K6 362 aa10.35□□□□□ -0.75
C11orf54-215ENST00000617482 SLC26A1Q9H2B4 701 aa10.35□□□□□ -0.75
C11orf54-215ENST00000617482 TREM1Q9NP99 234 aa10.35□□□□□ -0.75
C11orf54-215ENST00000617482 TMEM100Q9NV29 134 aa10.35□□□□□ -0.75
C11orf54-215ENST00000617482 OSGIN2Q9Y236 505 aa10.35□□□□□ -0.75
C11orf54-215ENST00000617482 PIGLQ9Y2B2 252 aa10.35□□□□□ -0.75
C11orf54-215ENST00000617482 HDGFL3Q9Y3E1 203 aa10.35□□□□□ -0.75
C11orf54-215ENST00000617482 CHCHD2Q9Y6H1 151 aaPredicted RBP10.35□□□□□ -0.75
C11orf54-215ENST00000617482 IGKV1D-8A0A087WSZ0 117 aa10.35□□□□□ -0.75
C11orf54-215ENST00000617482 MSR1P21757 451 aa10.35□□□□□ -0.75
C11orf54-215ENST00000617482 GABRR1P24046 479 aa10.35□□□□□ -0.75
C11orf54-215ENST00000617482 CBX5P45973 191 aa10.35□□□□□ -0.75
C11orf54-215ENST00000617482 CSNK1A1P48729 337 aa10.35□□□□□ -0.75
C11orf54-215ENST00000617482 SLC35A1P78382 337 aa10.35□□□□□ -0.75
C11orf54-215ENST00000617482 NAAAQ02083 359 aa10.35□□□□□ -0.75
C11orf54-215ENST00000617482 RSPO1Q2MKA7 263 aaPredicted RBP10.35□□□□□ -0.75
C11orf54-215ENST00000617482 CCDC157Q569K6 752 aa10.35□□□□□ -0.75
C11orf54-215ENST00000617482 ZNF385CQ66K41 422 aaPredicted RBP10.35□□□□□ -0.75
C11orf54-215ENST00000617482 Q7L0L9 218 aa10.35□□□□□ -0.75
C11orf54-215ENST00000617482 SVBPQ8N300 66 aa10.35□□□□□ -0.75
C11orf54-215ENST00000617482 SLC25A43Q8WUT9 341 aaPredicted RBP10.35□□□□□ -0.75
C11orf54-215ENST00000617482 ARL11Q969Q4 196 aa10.35□□□□□ -0.75
C11orf54-215ENST00000617482 C2orf50Q96LR7 162 aa10.35□□□□□ -0.75
C11orf54-215ENST00000617482 CCDC74BQ96LY2 380 aa10.35□□□□□ -0.75
C11orf54-215ENST00000617482 JSRP1Q96MG2 331 aaPredicted RBP10.35□□□□□ -0.75
C11orf54-215ENST00000617482 HDHD3Q9BSH5 251 aaPredicted RBP10.35□□□□□ -0.75
C11orf54-215ENST00000617482 HRH4Q9H3N8 390 aa10.35□□□□□ -0.75
C11orf54-215ENST00000617482 ZNF629Q9UEG4 869 aaPredicted RBP10.35□□□□□ -0.75
C11orf54-215ENST00000617482 PURGQ9UJV8 347 aaKnown RBP10.35□□□□□ -0.75
C11orf54-215ENST00000617482 PRF1P14222 555 aa10.34□□□□□ -0.75
C11orf54-215ENST00000617482 RPS2P15880 293 aaKnown RBP10.34□□□□□ -0.75
C11orf54-215ENST00000617482 EIF1P41567 113 aaKnown RBP10.34□□□□□ -0.75
C11orf54-215ENST00000617482 PRSS12P56730 875 aa10.34□□□□□ -0.75
C11orf54-215ENST00000617482 TAS2R46P59540 309 aa10.34□□□□□ -0.75
C11orf54-215ENST00000617482 ENDOGQ14249 297 aaKnown RBP10.34□□□□□ -0.75
C11orf54-215ENST00000617482 FAM189A2Q15884 450 aa10.34□□□□□ -0.75
C11orf54-215ENST00000617482 PPP1R3BQ86XI6 285 aa10.34□□□□□ -0.75
C11orf54-215ENST00000617482 CBLN2Q8IUK8 224 aa10.34□□□□□ -0.75
C11orf54-215ENST00000617482 FADS6Q8N9I5 356 aa10.34□□□□□ -0.75
C11orf54-215ENST00000617482 GJC3Q8NFK1 279 aa10.34□□□□□ -0.75
C11orf54-215ENST00000617482 OR4A4PQ8NGN8 299 aa10.34□□□□□ -0.75
C11orf54-215ENST00000617482 OCIAD1Q9NX40 245 aa10.34□□□□□ -0.75
C11orf54-215ENST00000617482 NCOA6Q14686 2063 aaPredicted RBP10.34□□□□□ -0.75
C11orf54-215ENST00000617482 A6NJY4 79 aa10.34□□□□□ -0.75
C11orf54-215ENST00000617482 DHRS3O75911 302 aa10.34□□□□□ -0.75
C11orf54-215ENST00000617482 DKK1O94907 266 aa10.34□□□□□ -0.75
C11orf54-215ENST00000617482 CSTBP04080 98 aaKnown RBP10.34□□□□□ -0.75
C11orf54-215ENST00000617482 SCRN3Q0VDG4 424 aa10.34□□□□□ -0.75
C11orf54-215ENST00000617482 ZNF837Q96EG3 531 aaPredicted RBP10.34□□□□□ -0.75
C11orf54-215ENST00000617482 CNTNAP3BQ96NU0 1288 aa10.34□□□□□ -0.75
C11orf54-215ENST00000617482 NECAB3Q96P71 396 aaPredicted RBP10.34□□□□□ -0.75
C11orf54-215ENST00000617482 NELFAQ9H3P2 528 aa10.34□□□□□ -0.75
C11orf54-215ENST00000617482 SAV1Q9H4B6 383 aaPredicted RBP10.34□□□□□ -0.75
C11orf54-215ENST00000617482 HPF1Q9NWY4 346 aa10.34□□□□□ -0.75
C11orf54-215ENST00000617482 C19orf25Q9UFG5 118 aaPredicted RBP10.34□□□□□ -0.75
C11orf54-215ENST00000617482 MCTS1Q9ULC4 181 aaKnown RBP10.34□□□□□ -0.75
C11orf54-215ENST00000617482 LHX6Q9UPM6 363 aa10.34□□□□□ -0.75
C11orf54-215ENST00000617482 FAM96BQ9Y3D0 163 aa10.34□□□□□ -0.75
C11orf54-215ENST00000617482 SDK2Q58EX2 2172 aa10.33□□□□□ -0.76
C11orf54-215ENST00000617482 DHRS7CA6NNS2 312 aa10.33□□□□□ -0.76
C11orf54-215ENST00000617482 FOXI3A8MTJ6 420 aaPredicted RBP10.33□□□□□ -0.76
C11orf54-215ENST00000617482 SIGLEC6O43699 453 aa10.33□□□□□ -0.76
C11orf54-215ENST00000617482 ZNF205O95201 554 aa10.33□□□□□ -0.76
C11orf54-215ENST00000617482 LSM6P62312 80 aaKnown RBP10.33□□□□□ -0.76
C11orf54-215ENST00000617482 CHAF1BQ13112 559 aa10.33□□□□□ -0.76
C11orf54-215ENST00000617482 RAET1LQ5VY80 246 aa10.33□□□□□ -0.76
C11orf54-215ENST00000617482 RPL7L1Q6DKI1 246 aaKnown RBP10.33□□□□□ -0.76
C11orf54-215ENST00000617482 H3F3CQ6NXT2 135 aa10.33□□□□□ -0.76
C11orf54-215ENST00000617482 HAGHLQ6PII5 290 aaPredicted RBP10.33□□□□□ -0.76
C11orf54-215ENST00000617482 POC1AQ8NBT0 407 aa10.33□□□□□ -0.76
C11orf54-215ENST00000617482 SEMA6DQ8NFY4 1073 aa10.33□□□□□ -0.76
C11orf54-215ENST00000617482 CPNE2Q96FN4 548 aaPredicted RBP10.33□□□□□ -0.76
C11orf54-215ENST00000617482 AQP10Q96PS8 301 aa10.33□□□□□ -0.76
C11orf54-215ENST00000617482 ZNF2Q9BSG1 426 aaPredicted RBP10.33□□□□□ -0.76
C11orf54-215ENST00000617482 SLC5A7Q9GZV3 580 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms