RNA–Protein interactions for RNA: ENST00000583948.5

NUP85-224, Transcript of nucleoporin 85, humanhuman

TSL 2

Gene NUP85, Length 1,197 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-224ENST00000583948 BRD7Q9NPI1 651 aa9.66□□□□□ -0.86
NUP85-224ENST00000583948 FRRS1LQ9P0K9 344 aa9.66□□□□□ -0.86
NUP85-224ENST00000583948 SLC22A13Q9Y226 551 aa9.66□□□□□ -0.86
NUP85-224ENST00000583948 CMAHPQ9Y471 501 aa9.66□□□□□ -0.86
NUP85-224ENST00000583948 N6AMT1Q9Y5N5 214 aa9.66□□□□□ -0.86
NUP85-224ENST00000583948 R4GMQ9 66 aa9.66□□□□□ -0.86
NUP85-224ENST00000583948 TMEM269A0A1B0GVZ9 245 aa9.65□□□□□ -0.86
NUP85-224ENST00000583948 SMIM30A4D0T7 59 aa9.65□□□□□ -0.86
NUP85-224ENST00000583948 FAM181BA6NEQ2 426 aa9.65□□□□□ -0.86
NUP85-224ENST00000583948 TMEM212A6NML5 194 aa9.65□□□□□ -0.86
NUP85-224ENST00000583948 H3BSH0 61 aa9.65□□□□□ -0.86
NUP85-224ENST00000583948 M0R233 179 aa9.65□□□□□ -0.86
NUP85-224ENST00000583948 DOK2O60496 412 aa9.65□□□□□ -0.86
NUP85-224ENST00000583948 ZFPL1O95159 310 aa9.65□□□□□ -0.86
NUP85-224ENST00000583948 IGKV3-15P01624 115 aa9.65□□□□□ -0.86
NUP85-224ENST00000583948 CD1AP06126 327 aa9.65□□□□□ -0.86
NUP85-224ENST00000583948 IGHV4-38-2P0DP08 117 aa9.65□□□□□ -0.86
NUP85-224ENST00000583948 MYL9P24844 172 aa9.65□□□□□ -0.86
NUP85-224ENST00000583948 FGF9P31371 208 aaPredicted RBP9.65□□□□□ -0.86
NUP85-224ENST00000583948 PRKXP51817 358 aa9.65□□□□□ -0.86
NUP85-224ENST00000583948 TMEM33P57088 247 aa9.65□□□□□ -0.86
NUP85-224ENST00000583948 GRB2P62993 217 aaKnown RBP9.65□□□□□ -0.86
NUP85-224ENST00000583948 SCRN3Q0VDG4 424 aa9.65□□□□□ -0.86
NUP85-224ENST00000583948 FAM189A2Q15884 450 aa9.65□□□□□ -0.86
NUP85-224ENST00000583948 ACSM3Q53FZ2 586 aa9.65□□□□□ -0.86
NUP85-224ENST00000583948 C17orf107Q6ZR85 190 aa9.65□□□□□ -0.86
NUP85-224ENST00000583948 CATSPERDQ86XM0 798 aa9.65□□□□□ -0.86
NUP85-224ENST00000583948 PRSS35Q8N3Z0 413 aa9.65□□□□□ -0.86
NUP85-224ENST00000583948 ZNF283Q8N7M2 679 aa9.65□□□□□ -0.86
NUP85-224ENST00000583948 DEFB108BQ8NET1 73 aa9.65□□□□□ -0.86
NUP85-224ENST00000583948 RPS4Y2Q8TD47 263 aa9.65□□□□□ -0.86
NUP85-224ENST00000583948 TSEN15Q8WW01 171 aaKnown RBP9.65□□□□□ -0.86
NUP85-224ENST00000583948 SLC25A28Q96A46 364 aa9.65□□□□□ -0.86
NUP85-224ENST00000583948 ATF6BQ99941 703 aa9.65□□□□□ -0.86
NUP85-224ENST00000583948 RNF121Q9H920 327 aa9.65□□□□□ -0.86
NUP85-224ENST00000583948 SNTG1Q9NSN8 517 aa9.65□□□□□ -0.86
NUP85-224ENST00000583948 PLEK2Q9NYT0 353 aa9.65□□□□□ -0.86
NUP85-224ENST00000583948 CCDC59Q9P031 241 aaKnown RBP9.65□□□□□ -0.86
NUP85-224ENST00000583948 DUSP13Q9UII6 198 aa9.65□□□□□ -0.86
NUP85-224ENST00000583948 WIPI2Q9Y4P8 454 aa9.65□□□□□ -0.86
NUP85-224ENST00000583948 RYR2Q92736 4967 aa9.64□□□□□ -0.87
NUP85-224ENST00000583948 A0A1W2PPK0 400 aa9.64□□□□□ -0.87
NUP85-224ENST00000583948 OR4C45A6NMZ5 311 aa9.64□□□□□ -0.87
NUP85-224ENST00000583948 TRAPPC2LH3BP13 241 aa9.64□□□□□ -0.87
NUP85-224ENST00000583948 RPL36A-HNRNPH2H7BZ11 118 aa9.64□□□□□ -0.87
NUP85-224ENST00000583948 M0QZ24 198 aa9.64□□□□□ -0.87
NUP85-224ENST00000583948 SGCEO43556 437 aa9.64□□□□□ -0.87
NUP85-224ENST00000583948 CLEC2LP0C7M8 214 aa9.64□□□□□ -0.87
NUP85-224ENST00000583948 PATE4P0C8F1 98 aa9.64□□□□□ -0.87
NUP85-224ENST00000583948 ZNF32P17041 273 aa9.64□□□□□ -0.87
NUP85-224ENST00000583948 GALP22466 123 aa9.64□□□□□ -0.87
NUP85-224ENST00000583948 CALRP27797 417 aaKnown RBP9.64□□□□□ -0.87
NUP85-224ENST00000583948 SDC2P34741 201 aa9.64□□□□□ -0.87
NUP85-224ENST00000583948 SOX6P35712 828 aa9.64□□□□□ -0.87
NUP85-224ENST00000583948 SOX2P48431 317 aa9.64□□□□□ -0.87
NUP85-224ENST00000583948 CX3CR1P49238 355 aa9.64□□□□□ -0.87
NUP85-224ENST00000583948 SH3BGRP55822 239 aaPredicted RBP9.64□□□□□ -0.87
NUP85-224ENST00000583948 PSMA6P60900 246 aaKnown RBP9.64□□□□□ -0.87
NUP85-224ENST00000583948 PCBD1P61457 104 aa9.64□□□□□ -0.87
NUP85-224ENST00000583948 SEC61A1P61619 476 aaKnown RBP9.64□□□□□ -0.87
NUP85-224ENST00000583948 GALK2Q01415 458 aa9.64□□□□□ -0.87
NUP85-224ENST00000583948 CCDC92Q53HC0 331 aaPredicted RBP9.64□□□□□ -0.87
NUP85-224ENST00000583948 YIF1BQ5BJH7 314 aa9.64□□□□□ -0.87
NUP85-224ENST00000583948 ZMAT1Q5H9K5 638 aa9.64□□□□□ -0.87
NUP85-224ENST00000583948 FAM27D1Q5T7N8 215 aa9.64□□□□□ -0.87
NUP85-224ENST00000583948 FDX2Q6P4F2 183 aa9.64□□□□□ -0.87
NUP85-224ENST00000583948 SKA3Q8IX90 412 aa9.64□□□□□ -0.87
NUP85-224ENST00000583948 RGP1Q92546 391 aaPredicted RBP9.64□□□□□ -0.87
NUP85-224ENST00000583948 PPP1R14AQ96A00 147 aa9.64□□□□□ -0.87
NUP85-224ENST00000583948 OR14A2Q96R54 314 aa9.64□□□□□ -0.87
NUP85-224ENST00000583948 OR51B6Q9H340 312 aa9.64□□□□□ -0.87
NUP85-224ENST00000583948 NIPAL2Q9H841 368 aa9.64□□□□□ -0.87
NUP85-224ENST00000583948 PNRC2Q9NPJ4 139 aaKnown RBP9.64□□□□□ -0.87
NUP85-224ENST00000583948 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.64□□□□□ -0.87
NUP85-224ENST00000583948 DCAF16Q9NXF7 216 aa9.64□□□□□ -0.87
NUP85-224ENST00000583948 OR52A1Q9UKL2 312 aa9.64□□□□□ -0.87
NUP85-224ENST00000583948 NUP50Q9UKX7 468 aa9.64□□□□□ -0.87
NUP85-224ENST00000583948 DNAH9Q9NYC9 4486 aa9.63□□□□□ -0.87
NUP85-224ENST00000583948 ARPC4-TTLL3A0A0A6YYG9 625 aa9.63□□□□□ -0.87
NUP85-224ENST00000583948 ACOD1A6NK06 481 aa9.63□□□□□ -0.87
NUP85-224ENST00000583948 ZNF879B4DU55 563 aa9.63□□□□□ -0.87
NUP85-224ENST00000583948 J3QLI3 93 aa9.63□□□□□ -0.87
NUP85-224ENST00000583948 HOXA3O43365 443 aaPredicted RBP9.63□□□□□ -0.87
NUP85-224ENST00000583948 SRSF10O75494 262 aaKnown RBP9.63□□□□□ -0.87
NUP85-224ENST00000583948 IL1AP01583 271 aa9.63□□□□□ -0.87
NUP85-224ENST00000583948 HLA-HP01893 362 aa9.63□□□□□ -0.87
NUP85-224ENST00000583948 ANXA2P07355 339 aaKnown RBP9.63□□□□□ -0.87
NUP85-224ENST00000583948 SLC2A1P11166 492 aa9.63□□□□□ -0.87
NUP85-224ENST00000583948 CD79AP11912 226 aa9.63□□□□□ -0.87
NUP85-224ENST00000583948 CBR1P16152 277 aa9.63□□□□□ -0.87
NUP85-224ENST00000583948 RPS19P39019 145 aaKnown RBP9.63□□□□□ -0.87
NUP85-224ENST00000583948 HTR5AP47898 357 aa9.63□□□□□ -0.87
NUP85-224ENST00000583948 SLC6A9P48067 706 aa9.63□□□□□ -0.87
NUP85-224ENST00000583948 CCR9P51686 369 aa9.63□□□□□ -0.87
NUP85-224ENST00000583948 ZNF121P58317 390 aaPredicted RBP9.63□□□□□ -0.87
NUP85-224ENST00000583948 ERVS71-1P61550 626 aa9.63□□□□□ -0.87
NUP85-224ENST00000583948 HIST1H3AP68431 136 aa9.63□□□□□ -0.87
NUP85-224ENST00000583948 LSAMPQ13449 338 aa9.63□□□□□ -0.87
NUP85-224ENST00000583948 SLC36A2Q495M3 483 aa9.63□□□□□ -0.87
NUP85-224ENST00000583948 SPRNQ5BIV9 151 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 128.2 ms