RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 C6orf99Q4VX62 202 aa0.09□□□□□ -2.4
FOXN3-216ENST00000557496 HSP90AB3PQ58FF7 597 aa0.09□□□□□ -2.4
FOXN3-216ENST00000557496 ATAD3BQ5T9A4 648 aa0.09□□□□□ -2.4
FOXN3-216ENST00000557496 SLC8B1Q6J4K2 584 aa0.09□□□□□ -2.4
FOXN3-216ENST00000557496 TMEM220Q6QAJ8 160 aa0.09□□□□□ -2.4
FOXN3-216ENST00000557496 CASC1Q6TDU7 716 aa0.09□□□□□ -2.4
FOXN3-216ENST00000557496 METAP1DQ6UB28 335 aaPredicted RBP0.09□□□□□ -2.4
FOXN3-216ENST00000557496 Q6ZQT7 251 aa0.09□□□□□ -2.4
FOXN3-216ENST00000557496 PRNTQ86SH4 94 aa0.09□□□□□ -2.4
FOXN3-216ENST00000557496 MED12LQ86YW9 2145 aa0.09□□□□□ -2.4
FOXN3-216ENST00000557496 SLC22A9Q8IVM8 553 aa0.09□□□□□ -2.4
FOXN3-216ENST00000557496 TBC1D21Q8IYX1 336 aa0.09□□□□□ -2.4
FOXN3-216ENST00000557496 ZCCHC24Q8N2G6 241 aaKnown RBP0.09□□□□□ -2.4
FOXN3-216ENST00000557496 SPATA4Q8NEY3 305 aa0.09□□□□□ -2.4
FOXN3-216ENST00000557496 OR52E5Q8NH55 327 aa0.09□□□□□ -2.4
FOXN3-216ENST00000557496 ELMO1Q92556 727 aa0.09□□□□□ -2.4
FOXN3-216ENST00000557496 NRGNQ92686 78 aa0.09□□□□□ -2.4
FOXN3-216ENST00000557496 RPEQ96AT9 228 aa0.09□□□□□ -2.4
FOXN3-216ENST00000557496 SGTBQ96EQ0 304 aa0.09□□□□□ -2.4
FOXN3-216ENST00000557496 UBE2E2Q96LR5 201 aa0.09□□□□□ -2.4
FOXN3-216ENST00000557496 PRRC1Q96M27 445 aa0.09□□□□□ -2.4
FOXN3-216ENST00000557496 SLC7A5P2Q9GIP4 190 aa0.09□□□□□ -2.4
FOXN3-216ENST00000557496 TMEM38AQ9H6F2 299 aa0.09□□□□□ -2.4
FOXN3-216ENST00000557496 KIR3DX1Q9H7L2 352 aa0.09□□□□□ -2.4
FOXN3-216ENST00000557496 TMEM100Q9NV29 134 aa0.09□□□□□ -2.4
FOXN3-216ENST00000557496 PSMC3IPQ9P2W1 217 aaPredicted RBP0.09□□□□□ -2.4
FOXN3-216ENST00000557496 SLC17A4Q9Y2C5 497 aa0.09□□□□□ -2.4
FOXN3-216ENST00000557496 RCL1Q9Y2P8 373 aaKnown RBP0.09□□□□□ -2.4
FOXN3-216ENST00000557496 ZNF257Q9Y2Q1 563 aa0.09□□□□□ -2.4
FOXN3-216ENST00000557496 ICOSQ9Y6W8 199 aa0.09□□□□□ -2.4
FOXN3-216ENST00000557496 POLEQ07864 2286 aa0.09□□□□□ -2.4
FOXN3-216ENST00000557496 SSPOA2VEC9 5147 aa0.09□□□□□ -2.4
FOXN3-216ENST00000557496 UBN2Q6ZU65 1347 aa0.09□□□□□ -2.4
FOXN3-216ENST00000557496 ADAMTSL3P82987 1691 aa0.08□□□□□ -2.4
FOXN3-216ENST00000557496 INSRP06213 1382 aa0.08□□□□□ -2.4
FOXN3-216ENST00000557496 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP0.08□□□□□ -2.4
FOXN3-216ENST00000557496 FRAS1Q86XX4 4008 aa0.08□□□□□ -2.4
FOXN3-216ENST00000557496 TECTAO75443 2155 aa0.08□□□□□ -2.4
FOXN3-216ENST00000557496 RP1P56715 2156 aa0.08□□□□□ -2.4
FOXN3-216ENST00000557496 ARFGEF3Q5TH69 2177 aa0.08□□□□□ -2.4
FOXN3-216ENST00000557496 IGKV1D-37A0A075B6S9 117 aa0.08□□□□□ -2.4
FOXN3-216ENST00000557496 TRBV9A0A0B4J1U6 114 aa0.08□□□□□ -2.4
FOXN3-216ENST00000557496 TMEM72A0PK05 275 aa0.08□□□□□ -2.4
FOXN3-216ENST00000557496 A8MWP4 228 aa0.08□□□□□ -2.4
FOXN3-216ENST00000557496 ISLRO14498 428 aa0.08□□□□□ -2.4
FOXN3-216ENST00000557496 ZBTB5O15062 677 aa0.08□□□□□ -2.4
FOXN3-216ENST00000557496 CLOCKO15516 846 aa0.08□□□□□ -2.4
FOXN3-216ENST00000557496 RNF13O43567 381 aa0.08□□□□□ -2.4
FOXN3-216ENST00000557496 SLC16A7O60669 478 aa0.08□□□□□ -2.4
FOXN3-216ENST00000557496 NOL3O60936 208 aaKnown RBP0.08□□□□□ -2.4
FOXN3-216ENST00000557496 SEC11BP0C7V7 166 aa0.08□□□□□ -2.4
FOXN3-216ENST00000557496 DESP17661 470 aa0.08□□□□□ -2.4
FOXN3-216ENST00000557496 RAB4AP20338 218 aa0.08□□□□□ -2.4
FOXN3-216ENST00000557496 MX1P20591 662 aa0.08□□□□□ -2.4
FOXN3-216ENST00000557496 BCKDHBP21953 392 aa0.08□□□□□ -2.4
FOXN3-216ENST00000557496 TUBG1P23258 451 aa0.08□□□□□ -2.4
FOXN3-216ENST00000557496 IL3RAP26951 378 aa0.08□□□□□ -2.4
FOXN3-216ENST00000557496 GNRHRP30968 328 aa0.08□□□□□ -2.4
FOXN3-216ENST00000557496 APLNRP35414 380 aa0.08□□□□□ -2.4
FOXN3-216ENST00000557496 CFHR2P36980 270 aa0.08□□□□□ -2.4
FOXN3-216ENST00000557496 PPICP45877 212 aa0.08□□□□□ -2.4
FOXN3-216ENST00000557496 RGS6P49758 472 aa0.08□□□□□ -2.4
FOXN3-216ENST00000557496 RAB7AP51149 207 aa0.08□□□□□ -2.4
FOXN3-216ENST00000557496 ACLYP53396 1101 aa0.08□□□□□ -2.4
FOXN3-216ENST00000557496 EIF3EP60228 445 aaKnown RBP0.08□□□□□ -2.4
FOXN3-216ENST00000557496 ZNF33AQ06730 810 aa0.08□□□□□ -2.4
FOXN3-216ENST00000557496 DDX39BQ13838 428 aaKnown RBP0.08□□□□□ -2.4
FOXN3-216ENST00000557496 ITIH4Q14624 930 aa0.08□□□□□ -2.4
FOXN3-216ENST00000557496 TRAM2Q15035 370 aa0.08□□□□□ -2.4
FOXN3-216ENST00000557496 TAF7Q15545 349 aaPredicted RBP0.08□□□□□ -2.4
FOXN3-216ENST00000557496 GABRA6Q16445 453 aa0.08□□□□□ -2.4
FOXN3-216ENST00000557496 LINC00303Q3SY05 128 aa0.08□□□□□ -2.4
FOXN3-216ENST00000557496 ANKDD1AQ495B1 522 aa0.08□□□□□ -2.4
FOXN3-216ENST00000557496 TPTE2P1Q5T6R2 138 aa0.08□□□□□ -2.4
FOXN3-216ENST00000557496 PRAMEF5Q5TYX0 476 aa0.08□□□□□ -2.4
FOXN3-216ENST00000557496 PRAMEF6Q5VXH4 476 aa0.08□□□□□ -2.4
FOXN3-216ENST00000557496 LRRC66Q68CR7 880 aa0.08□□□□□ -2.4
FOXN3-216ENST00000557496 REEP3Q6NUK4 255 aa0.08□□□□□ -2.4
FOXN3-216ENST00000557496 TMEM107Q6UX40 140 aa0.08□□□□□ -2.4
FOXN3-216ENST00000557496 CYHR1Q6ZMK1 362 aa0.08□□□□□ -2.4
FOXN3-216ENST00000557496 RGS9BPQ6ZS82 235 aa0.08□□□□□ -2.4
FOXN3-216ENST00000557496 TCF23Q7RTU1 214 aa0.08□□□□□ -2.4
FOXN3-216ENST00000557496 SLC16A14Q7RTX9 510 aa0.08□□□□□ -2.4
FOXN3-216ENST00000557496 PPP1R42Q7Z4L9 355 aa0.08□□□□□ -2.4
FOXN3-216ENST00000557496 FAM228AQ86W67 206 aa0.08□□□□□ -2.4
FOXN3-216ENST00000557496 PDPNQ86YL7 162 aa0.08□□□□□ -2.4
FOXN3-216ENST00000557496 MSRB3Q8IXL7 192 aa0.08□□□□□ -2.4
FOXN3-216ENST00000557496 IQCKQ8N0W5 287 aa0.08□□□□□ -2.4
FOXN3-216ENST00000557496 RNF10Q8N5U6 811 aaKnown RBP0.08□□□□□ -2.4
FOXN3-216ENST00000557496 OR2M7Q8NG81 312 aa0.08□□□□□ -2.4
FOXN3-216ENST00000557496 OR9K2Q8NGE7 335 aa0.08□□□□□ -2.4
FOXN3-216ENST00000557496 OR13C2Q8NGS9 318 aa0.08□□□□□ -2.4
FOXN3-216ENST00000557496 OR2K2Q8NGT1 345 aa0.08□□□□□ -2.4
FOXN3-216ENST00000557496 OR51F2Q8NH61 342 aa0.08□□□□□ -2.4
FOXN3-216ENST00000557496 OR5K2Q8NHB8 316 aa0.08□□□□□ -2.4
FOXN3-216ENST00000557496 AKR7LQ8NHP1 331 aa0.08□□□□□ -2.4
FOXN3-216ENST00000557496 LYPD6BQ8NI32 183 aa0.08□□□□□ -2.4
FOXN3-216ENST00000557496 RXFP2Q8WXD0 754 aa0.08□□□□□ -2.4
FOXN3-216ENST00000557496 FBXO32Q969P5 355 aa0.08□□□□□ -2.4
FOXN3-216ENST00000557496 ECHDC3Q96DC8 303 aa0.08□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms