RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 DUX4L7P0CJ90 424 aa12□□□□□ -0.49
PRPF40B-209ENST00000548825 NOVA1P51513 510 aaKnown RBP12□□□□□ -0.49
PRPF40B-209ENST00000548825 ZNF84P51523 738 aa12□□□□□ -0.49
PRPF40B-209ENST00000548825 SPIN3Q5JUX0 258 aa12□□□□□ -0.49
PRPF40B-209ENST00000548825 SPINK14Q6IE38 97 aa12□□□□□ -0.49
PRPF40B-209ENST00000548825 DEGS2Q6QHC5 323 aa12□□□□□ -0.49
PRPF40B-209ENST00000548825 DOK3Q7L591 496 aa12□□□□□ -0.49
PRPF40B-209ENST00000548825 OR5L1Q8NGL2 311 aa12□□□□□ -0.49
PRPF40B-209ENST00000548825 SAP25Q8TEE9 199 aa12□□□□□ -0.49
PRPF40B-209ENST00000548825 OR10C1Q96KK4 312 aa12□□□□□ -0.49
PRPF40B-209ENST00000548825 DUX4Q9UBX2 424 aa12□□□□□ -0.49
PRPF40B-209ENST00000548825 C14orf166Q9Y224 244 aaKnown RBP12□□□□□ -0.49
PRPF40B-209ENST00000548825 HS3ST3B1Q9Y662 390 aa12□□□□□ -0.49
PRPF40B-209ENST00000548825 PIEZO2Q9H5I5 2752 aa12□□□□□ -0.49
PRPF40B-209ENST00000548825 CCDC187A0A096LP49 1063 aa11.99□□□□□ -0.49
PRPF40B-209ENST00000548825 A0A0D9SG52 128 aa11.99□□□□□ -0.49
PRPF40B-209ENST00000548825 FAM166BA8MTA8 275 aa11.99□□□□□ -0.49
PRPF40B-209ENST00000548825 F8W036 122 aa11.99□□□□□ -0.49
PRPF40B-209ENST00000548825 RPA2P15927 270 aa11.99□□□□□ -0.49
PRPF40B-209ENST00000548825 ZNF17P17021 662 aa11.99□□□□□ -0.49
PRPF40B-209ENST00000548825 BLOC1S1P78537 153 aa11.99□□□□□ -0.49
PRPF40B-209ENST00000548825 IAH1Q2TAA2 248 aaPredicted RBP11.99□□□□□ -0.49
PRPF40B-209ENST00000548825 ANKRD55Q3KP44 614 aa11.99□□□□□ -0.49
PRPF40B-209ENST00000548825 PIGYQ3MUY2 71 aa11.99□□□□□ -0.49
PRPF40B-209ENST00000548825 ABCA11PQ4W5N1 156 aa11.99□□□□□ -0.49
PRPF40B-209ENST00000548825 OPN5Q6U736 354 aa11.99□□□□□ -0.49
PRPF40B-209ENST00000548825 GPR137CQ8N3F9 429 aa11.99□□□□□ -0.49
PRPF40B-209ENST00000548825 UBALD1Q8TB05 177 aa11.99□□□□□ -0.49
PRPF40B-209ENST00000548825 RRNAD1Q96FB5 475 aaKnown RBP11.99□□□□□ -0.49
PRPF40B-209ENST00000548825 LYZL4Q96KX0 146 aa11.99□□□□□ -0.49
PRPF40B-209ENST00000548825 NECAB3Q96P71 396 aaPredicted RBP11.99□□□□□ -0.49
PRPF40B-209ENST00000548825 SRXN1Q9BYN0 137 aa11.99□□□□□ -0.49
PRPF40B-209ENST00000548825 REG4Q9BYZ8 158 aa11.99□□□□□ -0.49
PRPF40B-209ENST00000548825 PRRG4Q9BZD6 226 aa11.99□□□□□ -0.49
PRPF40B-209ENST00000548825 ZNF442Q9H7R0 627 aa11.99□□□□□ -0.49
PRPF40B-209ENST00000548825 LAMA5O15230 3695 aa11.99□□□□□ -0.49
PRPF40B-209ENST00000548825 SGCEO43556 437 aa11.99□□□□□ -0.49
PRPF40B-209ENST00000548825 HPNP05981 417 aa11.99□□□□□ -0.49
PRPF40B-209ENST00000548825 FOLR3P41439 243 aa11.99□□□□□ -0.49
PRPF40B-209ENST00000548825 SCAND1P57086 179 aa11.99□□□□□ -0.49
PRPF40B-209ENST00000548825 CARD18P57730 90 aa11.99□□□□□ -0.49
PRPF40B-209ENST00000548825 ZP4Q12836 540 aa11.99□□□□□ -0.49
PRPF40B-209ENST00000548825 C3AR1Q16581 482 aa11.99□□□□□ -0.49
PRPF40B-209ENST00000548825 OR6X1Q8NH79 312 aa11.99□□□□□ -0.49
PRPF40B-209ENST00000548825 PAPOLGQ9BWT3 736 aaKnown RBP11.99□□□□□ -0.49
PRPF40B-209ENST00000548825 TNFSF18Q9UNG2 199 aa11.99□□□□□ -0.49
PRPF40B-209ENST00000548825 LDLRAD4O15165 306 aa11.99□□□□□ -0.49
PRPF40B-209ENST00000548825 B3GALNT1O75752 331 aa11.99□□□□□ -0.49
PRPF40B-209ENST00000548825 HOXD4P09016 255 aaPredicted RBP11.99□□□□□ -0.49
PRPF40B-209ENST00000548825 UBBP0CG47 229 aa11.99□□□□□ -0.49
PRPF40B-209ENST00000548825 ZP3P21754 424 aa11.99□□□□□ -0.49
PRPF40B-209ENST00000548825 RPS27AP62979 156 aaKnown RBP11.99□□□□□ -0.49
PRPF40B-209ENST00000548825 UBA52P62987 128 aaKnown RBP11.99□□□□□ -0.49
PRPF40B-209ENST00000548825 IGFBP7Q16270 282 aa11.99□□□□□ -0.49
PRPF40B-209ENST00000548825 MOB3CQ70IA8 216 aa11.99□□□□□ -0.49
PRPF40B-209ENST00000548825 PGAP1Q75T13 922 aa11.99□□□□□ -0.49
PRPF40B-209ENST00000548825 AAED1Q7RTV5 226 aa11.99□□□□□ -0.49
PRPF40B-209ENST00000548825 OR9K2Q8NGE7 335 aa11.99□□□□□ -0.49
PRPF40B-209ENST00000548825 OR6K3Q8NGY3 331 aa11.99□□□□□ -0.49
PRPF40B-209ENST00000548825 OR13G1Q8NGZ3 307 aa11.99□□□□□ -0.49
PRPF40B-209ENST00000548825 FBXO17Q96EF6 278 aa11.99□□□□□ -0.49
PRPF40B-209ENST00000548825 BORCS8Q96FH0 119 aa11.99□□□□□ -0.49
PRPF40B-209ENST00000548825 ARPC5LQ9BPX5 153 aa11.99□□□□□ -0.49
PRPF40B-209ENST00000548825 ZFHX2Q9C0A1 2572 aaPredicted RBP11.98□□□□□ -0.49
PRPF40B-209ENST00000548825 A0A1B0GTQ1 180 aa11.98□□□□□ -0.49
PRPF40B-209ENST00000548825 AQP7P3A6NL99 342 aa11.98□□□□□ -0.49
PRPF40B-209ENST00000548825 LAMTOR5O43504 91 aa11.98□□□□□ -0.49
PRPF40B-209ENST00000548825 BCL2L11O43521 198 aa11.98□□□□□ -0.49
PRPF40B-209ENST00000548825 MTRF1O75570 445 aaKnown RBP11.98□□□□□ -0.49
PRPF40B-209ENST00000548825 IGHMP01871 453 aa11.98□□□□□ -0.49
PRPF40B-209ENST00000548825 ZNF32P17041 273 aa11.98□□□□□ -0.49
PRPF40B-209ENST00000548825 MSX1P28360 303 aa11.98□□□□□ -0.49
PRPF40B-209ENST00000548825 SRSF3P84103 164 aaKnown RBP11.98□□□□□ -0.49
PRPF40B-209ENST00000548825 HNF4GQ14541 408 aa11.98□□□□□ -0.49
PRPF40B-209ENST00000548825 CEACAM16Q2WEN9 425 aa11.98□□□□□ -0.49
PRPF40B-209ENST00000548825 PDSS1Q5T2R2 415 aa11.98□□□□□ -0.49
PRPF40B-209ENST00000548825 SLC23A3Q6PIS1 610 aa11.98□□□□□ -0.49
PRPF40B-209ENST00000548825 MAML2Q8IZL2 1156 aaPredicted RBP11.98□□□□□ -0.49
PRPF40B-209ENST00000548825 PRR18Q8N4B5 295 aa11.98□□□□□ -0.49
PRPF40B-209ENST00000548825 RHBDD1Q8TEB9 315 aa11.98□□□□□ -0.49
PRPF40B-209ENST00000548825 MITD1Q8WV92 249 aa11.98□□□□□ -0.49
PRPF40B-209ENST00000548825 PIGQQ9BRB3 760 aa11.98□□□□□ -0.49
PRPF40B-209ENST00000548825 CALHM2Q9HA72 323 aa11.98□□□□□ -0.49
PRPF40B-209ENST00000548825 PLA2G3Q9NZ20 509 aa11.98□□□□□ -0.49
PRPF40B-209ENST00000548825 DHRS7CA6NNS2 312 aa11.98□□□□□ -0.49
PRPF40B-209ENST00000548825 EDN3P14138 238 aa11.98□□□□□ -0.49
PRPF40B-209ENST00000548825 CNR1P21554 472 aa11.98□□□□□ -0.49
PRPF40B-209ENST00000548825 OMGP23515 440 aa11.98□□□□□ -0.49
PRPF40B-209ENST00000548825 ACKR3P25106 362 aa11.98□□□□□ -0.49
PRPF40B-209ENST00000548825 PCOLCEQ15113 449 aa11.98□□□□□ -0.49
PRPF40B-209ENST00000548825 TMEM128Q5BJH2 165 aa11.98□□□□□ -0.49
PRPF40B-209ENST00000548825 SLC25A47Q6Q0C1 308 aa11.98□□□□□ -0.49
PRPF40B-209ENST00000548825 SLC16A14Q7RTX9 510 aa11.98□□□□□ -0.49
PRPF40B-209ENST00000548825 SULF2Q8IWU5 870 aa11.98□□□□□ -0.49
PRPF40B-209ENST00000548825 SEMA6DQ8NFY4 1073 aa11.98□□□□□ -0.49
PRPF40B-209ENST00000548825 MRPS24Q96EL2 167 aaKnown RBP11.98□□□□□ -0.49
PRPF40B-209ENST00000548825 CMSS1Q9BQ75 279 aaKnown RBP11.98□□□□□ -0.49
PRPF40B-209ENST00000548825 TGIF2Q9GZN2 237 aa11.98□□□□□ -0.49
PRPF40B-209ENST00000548825 MCTS1Q9ULC4 181 aaKnown RBP11.98□□□□□ -0.49
PRPF40B-209ENST00000548825 TMEM14DPA8MWL7 114 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms