RNA–Protein interactions for RNA: ENST00000543627.1

DDB1-222, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-222ENST00000543627 WDR82Q6UXN9 313 aa9.24□□□□□ -0.93
DDB1-222ENST00000543627 DCDC5Q6ZRR9 648 aa9.24□□□□□ -0.93
DDB1-222ENST00000543627 DOK3Q7L591 496 aa9.24□□□□□ -0.93
DDB1-222ENST00000543627 C11orf53Q8IXP5 236 aa9.24□□□□□ -0.93
DDB1-222ENST00000543627 GCSAMQ8N6F7 178 aa9.24□□□□□ -0.93
DDB1-222ENST00000543627 OR52I1Q8NGK6 324 aa9.24□□□□□ -0.93
DDB1-222ENST00000543627 OR14K1Q8NGZ2 314 aa9.24□□□□□ -0.93
DDB1-222ENST00000543627 RDH12Q96NR8 316 aa9.24□□□□□ -0.93
DDB1-222ENST00000543627 CCL13Q99616 98 aa9.24□□□□□ -0.93
DDB1-222ENST00000543627 MRI1Q9BV20 369 aa9.24□□□□□ -0.93
DDB1-222ENST00000543627 VCXQ9H320 206 aa9.24□□□□□ -0.93
DDB1-222ENST00000543627 DCLRE1BQ9H816 532 aa9.24□□□□□ -0.93
DDB1-222ENST00000543627 ABCB9Q9NP78 766 aa9.24□□□□□ -0.93
DDB1-222ENST00000543627 NKX1-2Q9UD57 310 aaPredicted RBP9.24□□□□□ -0.93
DDB1-222ENST00000543627 EXOGQ9Y2C4 368 aaKnown RBP9.24□□□□□ -0.93
DDB1-222ENST00000543627 IGHV3OR16-10A0A075B7F0 116 aa9.23□□□□□ -0.93
DDB1-222ENST00000543627 A0A1B0GTI1 187 aa9.23□□□□□ -0.93
DDB1-222ENST00000543627 TMEM210A6NLX4 147 aa9.23□□□□□ -0.93
DDB1-222ENST00000543627 DLGAP1O14490 977 aa9.23□□□□□ -0.93
DDB1-222ENST00000543627 TMPRSS2O15393 492 aa9.23□□□□□ -0.93
DDB1-222ENST00000543627 RHBDL1O75783 438 aa9.23□□□□□ -0.93
DDB1-222ENST00000543627 PLATP00750 562 aa9.23□□□□□ -0.93
DDB1-222ENST00000543627 AVPP01185 164 aa9.23□□□□□ -0.93
DDB1-222ENST00000543627 TFF1P04155 84 aa9.23□□□□□ -0.93
DDB1-222ENST00000543627 GLRA1P23415 457 aa9.23□□□□□ -0.93
DDB1-222ENST00000543627 GNG3P63215 75 aa9.23□□□□□ -0.93
DDB1-222ENST00000543627 IKZF1Q13422 519 aa9.23□□□□□ -0.93
DDB1-222ENST00000543627 CEACAM21Q3KPI0 293 aa9.23□□□□□ -0.93
DDB1-222ENST00000543627 KLHL22Q53GT1 634 aa9.23□□□□□ -0.93
DDB1-222ENST00000543627 CLVS2Q5SYC1 327 aa9.23□□□□□ -0.93
DDB1-222ENST00000543627 ZNF691Q5VV52 312 aa9.23□□□□□ -0.93
DDB1-222ENST00000543627 BTNL3Q6UXE8 466 aa9.23□□□□□ -0.93
DDB1-222ENST00000543627 PRSS35Q8N3Z0 413 aa9.23□□□□□ -0.93
DDB1-222ENST00000543627 PACRGLQ8N7B6 248 aa9.23□□□□□ -0.93
DDB1-222ENST00000543627 ZNF676Q8N7Q3 588 aa9.23□□□□□ -0.93
DDB1-222ENST00000543627 SETD9Q8NE22 299 aa9.23□□□□□ -0.93
DDB1-222ENST00000543627 OR5A2Q8NGI9 324 aa9.23□□□□□ -0.93
DDB1-222ENST00000543627 ZNF671Q8TAW3 534 aa9.23□□□□□ -0.93
DDB1-222ENST00000543627 APH1BQ8WW43 257 aa9.23□□□□□ -0.93
DDB1-222ENST00000543627 HPSE2Q8WWQ2 592 aa9.23□□□□□ -0.93
DDB1-222ENST00000543627 C22orf15Q8WYQ4 148 aa9.23□□□□□ -0.93
DDB1-222ENST00000543627 ST8SIA4Q92187 359 aa9.23□□□□□ -0.93
DDB1-222ENST00000543627 TMPRSS13Q9BYE2 586 aa9.23□□□□□ -0.93
DDB1-222ENST00000543627 FGF23Q9GZV9 251 aaPredicted RBP9.23□□□□□ -0.93
DDB1-222ENST00000543627 WDR13Q9H1Z4 485 aa9.23□□□□□ -0.93
DDB1-222ENST00000543627 ISG20L2Q9H9L3 353 aaKnown RBP9.23□□□□□ -0.93
DDB1-222ENST00000543627 RNPEPL1Q9HAU8 725 aa9.23□□□□□ -0.93
DDB1-222ENST00000543627 SLC7A11Q9UPY5 501 aa9.23□□□□□ -0.93
DDB1-222ENST00000543627 LRCH1Q9Y2L9 728 aa9.23□□□□□ -0.93
DDB1-222ENST00000543627 AUP1Q9Y679 476 aa9.23□□□□□ -0.93
DDB1-222ENST00000543627 V9GYS6 101 aa9.23□□□□□ -0.93
DDB1-222ENST00000543627 SVEP1Q4LDE5 3571 aa9.23□□□□□ -0.93
DDB1-222ENST00000543627 JMJD1CQ15652 2540 aa9.23□□□□□ -0.93
DDB1-222ENST00000543627 LOC107986453A0A1B0GWG9 222 aa9.22□□□□□ -0.93
DDB1-222ENST00000543627 E9PQ18 207 aa9.22□□□□□ -0.93
DDB1-222ENST00000543627 F5H0A9 414 aaPredicted RBP9.22□□□□□ -0.93
DDB1-222ENST00000543627 SERPINA3P01011 423 aa9.22□□□□□ -0.93
DDB1-222ENST00000543627 ZNF20P17024 532 aa9.22□□□□□ -0.93
DDB1-222ENST00000543627 KIR3DL2P43630 455 aa9.22□□□□□ -0.93
DDB1-222ENST00000543627 HAAOP46952 286 aa9.22□□□□□ -0.93
DDB1-222ENST00000543627 GBX2P52951 348 aaPredicted RBP9.22□□□□□ -0.93
DDB1-222ENST00000543627 ACTA2P62736 377 aa9.22□□□□□ -0.93
DDB1-222ENST00000543627 ACTG2P63267 376 aa9.22□□□□□ -0.93
DDB1-222ENST00000543627 SLC34A1Q06495 639 aa9.22□□□□□ -0.93
DDB1-222ENST00000543627 RAB40BQ12829 278 aa9.22□□□□□ -0.93
DDB1-222ENST00000543627 GALEQ14376 348 aa9.22□□□□□ -0.93
DDB1-222ENST00000543627 KRTAP21-3Q3LHN1 58 aa9.22□□□□□ -0.93
DDB1-222ENST00000543627 CDONQ4KMG0 1287 aa9.22□□□□□ -0.93
DDB1-222ENST00000543627 OGFRL1Q5TC84 451 aaPredicted RBP9.22□□□□□ -0.93
DDB1-222ENST00000543627 KCTD20Q7Z5Y7 419 aa9.22□□□□□ -0.93
DDB1-222ENST00000543627 FAM90A1Q86YD7 464 aa9.22□□□□□ -0.93
DDB1-222ENST00000543627 OR2G2Q8NGZ5 317 aa9.22□□□□□ -0.93
DDB1-222ENST00000543627 NANPQ8TBE9 248 aa9.22□□□□□ -0.93
DDB1-222ENST00000543627 FGGYQ96C11 551 aa9.22□□□□□ -0.93
DDB1-222ENST00000543627 ZNF488Q96MN9 340 aa9.22□□□□□ -0.93
DDB1-222ENST00000543627 MYCBPQ99417 103 aaPredicted RBP9.22□□□□□ -0.93
DDB1-222ENST00000543627 TRIM36Q9NQ86 728 aa9.22□□□□□ -0.93
DDB1-222ENST00000543627 C8orf4Q9NR00 106 aa9.22□□□□□ -0.93
DDB1-222ENST00000543627 ERVK13-1Q9NX77 482 aa9.22□□□□□ -0.93
DDB1-222ENST00000543627 FRRS1LQ9P0K9 344 aa9.22□□□□□ -0.93
DDB1-222ENST00000543627 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.22□□□□□ -0.935e-12■■■■□ 24.8
DDB1-222ENST00000543627 A0A1B0GW55 424 aa9.21□□□□□ -0.94
DDB1-222ENST00000543627 ANKRD61A6NGH8 418 aa9.21□□□□□ -0.94
DDB1-222ENST00000543627 OR5B21A6NL26 309 aa9.21□□□□□ -0.94
DDB1-222ENST00000543627 RNF212BA8MTL3 300 aa9.21□□□□□ -0.94
DDB1-222ENST00000543627 J3QLI3 93 aa9.21□□□□□ -0.94
DDB1-222ENST00000543627 J3QRE1 110 aa9.21□□□□□ -0.94
DDB1-222ENST00000543627 DVL1O14640 695 aa9.21□□□□□ -0.94
DDB1-222ENST00000543627 NDUFA2O43678 99 aa9.21□□□□□ -0.94
DDB1-222ENST00000543627 WBP4O75554 376 aaKnown RBP9.21□□□□□ -0.94
DDB1-222ENST00000543627 PTBP3O95758 552 aaKnown RBP9.21□□□□□ -0.94
DDB1-222ENST00000543627 LHBP01229 141 aa9.21□□□□□ -0.94
DDB1-222ENST00000543627 IGLV3-1P01715 115 aa9.21□□□□□ -0.94
DDB1-222ENST00000543627 UBCP0CG48 685 aaKnown RBP9.21□□□□□ -0.94
DDB1-222ENST00000543627 DUX4L2P0CJ85 424 aa9.21□□□□□ -0.94
DDB1-222ENST00000543627 DUX4L3P0CJ86 424 aa9.21□□□□□ -0.94
DDB1-222ENST00000543627 DUX4L4P0CJ87 422 aa9.21□□□□□ -0.94
DDB1-222ENST00000543627 DUX4L5P0CJ88 424 aa9.21□□□□□ -0.94
DDB1-222ENST00000543627 DUX4L6P0CJ89 424 aa9.21□□□□□ -0.94
DDB1-222ENST00000543627 DUX4L7P0CJ90 424 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 117.3 ms