RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, human

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX41-215	ENST00000512431	SLAMF6	Q96DU3	332 aa		10.09	□□□□□ -0.79
DDX41-215	ENST00000512431	RNF170	Q96K19	258 aa		10.09	□□□□□ -0.79
DDX41-215	ENST00000512431	HIST1H2AA	Q96QV6	131 aa		10.09	□□□□□ -0.79
DDX41-215	ENST00000512431	PARD6B	Q9BYG5	372 aa		10.09	□□□□□ -0.79
DDX41-215	ENST00000512431	GID8	Q9NWU2	228 aa		10.09	□□□□□ -0.79
DDX41-215	ENST00000512431	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	10.09	□□□□□ -0.79
DDX41-215	ENST00000512431	RHBDD3	Q9Y3P4	386 aa		10.09	□□□□□ -0.79
DDX41-215	ENST00000512431		V9GYY5	206 aa	Predicted RBP	10.09	□□□□□ -0.79
DDX41-215	ENST00000512431	EPPK1	P58107	5090 aa	Known RBP	10.09	□□□□□ -0.79
DDX41-215	ENST00000512431	RYR2	Q92736	4967 aa		10.08	□□□□□ -0.8
DDX41-215	ENST00000512431	IGKV1D-17	A0A075B6S4	117 aa		10.08	□□□□□ -0.8
DDX41-215	ENST00000512431	TVP23A	A6NH52	213 aa		10.08	□□□□□ -0.8
DDX41-215	ENST00000512431	ZNF878	C9JN71	531 aa		10.08	□□□□□ -0.8
DDX41-215	ENST00000512431	FXYD1	O00168	92 aa		10.08	□□□□□ -0.8
DDX41-215	ENST00000512431	MRAS	O14807	208 aa		10.08	□□□□□ -0.8
DDX41-215	ENST00000512431	GSTA4	O15217	222 aa		10.08	□□□□□ -0.8
DDX41-215	ENST00000512431	IDH3B	O43837	385 aa		10.08	□□□□□ -0.8
DDX41-215	ENST00000512431	RAMP3	O60896	148 aa		10.08	□□□□□ -0.8
DDX41-215	ENST00000512431	APOC1	P02654	83 aa		10.08	□□□□□ -0.8
DDX41-215	ENST00000512431	SPARC	P09486	303 aa		10.08	□□□□□ -0.8
DDX41-215	ENST00000512431	PSG2	P11465	335 aa		10.08	□□□□□ -0.8
DDX41-215	ENST00000512431	HSD11B1	P28845	292 aa		10.08	□□□□□ -0.8
DDX41-215	ENST00000512431	CX3CR1	P49238	355 aa		10.08	□□□□□ -0.8
DDX41-215	ENST00000512431	GSK3A	P49840	483 aa		10.08	□□□□□ -0.8
DDX41-215	ENST00000512431	DYNLT3	P51808	116 aa		10.08	□□□□□ -0.8
DDX41-215	ENST00000512431	GRB2	P62993	217 aa	Known RBP	10.08	□□□□□ -0.8
DDX41-215	ENST00000512431	GFOD2	Q3B7J2	385 aa		10.08	□□□□□ -0.8
DDX41-215	ENST00000512431	COQ5	Q5HYK3	327 aa		10.08	□□□□□ -0.8
DDX41-215	ENST00000512431	TCTEX1D4	Q5JR98	221 aa		10.08	□□□□□ -0.8
DDX41-215	ENST00000512431	ZNF782	Q6ZMW2	699 aa	Predicted RBP	10.08	□□□□□ -0.8
DDX41-215	ENST00000512431	MRPL41	Q8IXM3	137 aa	Known RBP	10.08	□□□□□ -0.8
DDX41-215	ENST00000512431	TIGD4	Q8IY51	512 aa		10.08	□□□□□ -0.8
DDX41-215	ENST00000512431	OR52H1	Q8NGJ2	320 aa		10.08	□□□□□ -0.8
DDX41-215	ENST00000512431	DYDC1	Q8WWB3	177 aa		10.08	□□□□□ -0.8
DDX41-215	ENST00000512431	TFAP2C	Q92754	450 aa		10.08	□□□□□ -0.8
DDX41-215	ENST00000512431	TLCD1	Q96CP7	247 aa		10.08	□□□□□ -0.8
DDX41-215	ENST00000512431	AKR1E2	Q96JD6	320 aa		10.08	□□□□□ -0.8
DDX41-215	ENST00000512431	ZNF649	Q9BS31	505 aa		10.08	□□□□□ -0.8
DDX41-215	ENST00000512431	C1orf21	Q9H246	121 aa		10.08	□□□□□ -0.8
DDX41-215	ENST00000512431	OR52D1	Q9H346	318 aa		10.08	□□□□□ -0.8
DDX41-215	ENST00000512431	PPP1R3E	Q9H7J1	279 aa		10.08	□□□□□ -0.8
DDX41-215	ENST00000512431	ENPP4	Q9Y6X5	453 aa		10.08	□□□□□ -0.8
DDX41-215	ENST00000512431	hCG_38984	A0A1B0GV85	526 aa		10.07	□□□□□ -0.8
DDX41-215	ENST00000512431	ZNF850	A8MQ14	1090 aa		10.07	□□□□□ -0.8
DDX41-215	ENST00000512431	BBIP1	A8MTZ0	92 aa		10.07	□□□□□ -0.8
DDX41-215	ENST00000512431	SLC1A7	O00341	560 aa		10.07	□□□□□ -0.8
DDX41-215	ENST00000512431	CCL3L1	P16619	93 aa		10.07	□□□□□ -0.8
DDX41-215	ENST00000512431	PYCR1	P32322	319 aa		10.07	□□□□□ -0.8
DDX41-215	ENST00000512431	SLC34A1	Q06495	639 aa		10.07	□□□□□ -0.8
DDX41-215	ENST00000512431	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	10.07	□□□□□ -0.8
DDX41-215	ENST00000512431	PRDX4	Q13162	271 aa		10.07	□□□□□ -0.8
DDX41-215	ENST00000512431	DYNC1I2	Q13409	638 aa	Known RBP	10.07	□□□□□ -0.8
DDX41-215	ENST00000512431	METTL21C	Q5VZV1	264 aa		10.07	□□□□□ -0.8
DDX41-215	ENST00000512431	KCTD18	Q6PI47	426 aa	Predicted RBP	10.07	□□□□□ -0.8
DDX41-215	ENST00000512431	CBLL1	Q75N03	491 aa		10.07	□□□□□ -0.8
DDX41-215	ENST00000512431	CALHM1	Q8IU99	346 aa		10.07	□□□□□ -0.8
DDX41-215	ENST00000512431	FAM86B1	Q8N7N1	296 aa		10.07	□□□□□ -0.8
DDX41-215	ENST00000512431		Q8NFD4	153 aa		10.07	□□□□□ -0.8
DDX41-215	ENST00000512431	OR2T4	Q8NH00	348 aa		10.07	□□□□□ -0.8
DDX41-215	ENST00000512431	OR2T27	Q8NH04	317 aa		10.07	□□□□□ -0.8
DDX41-215	ENST00000512431	ZNF671	Q8TAW3	534 aa		10.07	□□□□□ -0.8
DDX41-215	ENST00000512431	OR5P3	Q8WZ94	311 aa		10.07	□□□□□ -0.8
DDX41-215	ENST00000512431	SDSL	Q96GA7	329 aa		10.07	□□□□□ -0.8
DDX41-215	ENST00000512431	HSH2D	Q96JZ2	352 aa		10.07	□□□□□ -0.8
DDX41-215	ENST00000512431	OR10A2	Q9H208	303 aa		10.07	□□□□□ -0.8
DDX41-215	ENST00000512431	YY1AP1	Q9H869	796 aa		10.07	□□□□□ -0.8
DDX41-215	ENST00000512431	PALMD	Q9NP74	551 aa		10.07	□□□□□ -0.8
DDX41-215	ENST00000512431	KRT72	Q14CN4	511 aa		10.06	□□□□□ -0.8
DDX41-215	ENST00000512431	FAM76B	Q5HYJ3	339 aa		10.06	□□□□□ -0.8
DDX41-215	ENST00000512431	SLC35F1	Q5T1Q4	408 aa		10.06	□□□□□ -0.8
DDX41-215	ENST00000512431	FAM57B	Q71RH2	274 aa		10.06	□□□□□ -0.8
DDX41-215	ENST00000512431	C16orf82	Q7Z2V1	217 aa		10.06	□□□□□ -0.8
DDX41-215	ENST00000512431	THAP5	Q7Z6K1	395 aa		10.06	□□□□□ -0.8
DDX41-215	ENST00000512431	ZNF561	Q8N587	486 aa		10.06	□□□□□ -0.8
DDX41-215	ENST00000512431	C11orf42	Q8N5U0	333 aa		10.06	□□□□□ -0.8
DDX41-215	ENST00000512431	OR4M1	Q8NGD0	313 aa		10.06	□□□□□ -0.8
DDX41-215	ENST00000512431	PIGC	Q92535	297 aa		10.06	□□□□□ -0.8
DDX41-215	ENST00000512431	ASCL2	Q99929	193 aa		10.06	□□□□□ -0.8
DDX41-215	ENST00000512431	RGCC	Q9H4X1	137 aa		10.06	□□□□□ -0.8
DDX41-215	ENST00000512431	TMBIM4	Q9HC24	238 aa		10.06	□□□□□ -0.8
DDX41-215	ENST00000512431	MRGBP	Q9NV56	204 aa		10.06	□□□□□ -0.8
DDX41-215	ENST00000512431	AP3M1	Q9Y2T2	418 aa		10.06	□□□□□ -0.8
DDX41-215	ENST00000512431	HILPDA	Q9Y5L2	63 aa		10.06	□□□□□ -0.8
DDX41-215	ENST00000512431	TRBV4-1	A0A0J9YWV2	114 aa		10.05	□□□□□ -0.8
DDX41-215	ENST00000512431	LCE6A	A0A183	80 aa		10.05	□□□□□ -0.8
DDX41-215	ENST00000512431		H0YHG0	523 aa		10.05	□□□□□ -0.8
DDX41-215	ENST00000512431	ZNF593	O00488	134 aa	Predicted RBP	10.05	□□□□□ -0.8
DDX41-215	ENST00000512431	CXCR6	O00574	342 aa		10.05	□□□□□ -0.8
DDX41-215	ENST00000512431	SERPINA1	P01009	418 aa		10.05	□□□□□ -0.8
DDX41-215	ENST00000512431	LPL	P06858	475 aa		10.05	□□□□□ -0.8
DDX41-215	ENST00000512431	LYL1	P12980	280 aa		10.05	□□□□□ -0.8
DDX41-215	ENST00000512431	RHCE	P18577	417 aa		10.05	□□□□□ -0.8
DDX41-215	ENST00000512431	FMO3	P31513	532 aa		10.05	□□□□□ -0.8
DDX41-215	ENST00000512431	ENTPD1	P49961	510 aa		10.05	□□□□□ -0.8
DDX41-215	ENST00000512431	EIF2B1	Q14232	305 aa	Known RBP	10.05	□□□□□ -0.8
DDX41-215	ENST00000512431	MAPRE2	Q15555	327 aa		10.05	□□□□□ -0.8
DDX41-215	ENST00000512431	ZNF626	Q68DY1	528 aa		10.05	□□□□□ -0.8
DDX41-215	ENST00000512431	ZDHHC23	Q8IYP9	409 aa		10.05	□□□□□ -0.8
DDX41-215	ENST00000512431	OR52J3	Q8NH60	311 aa		10.05	□□□□□ -0.8
DDX41-215	ENST00000512431	PGAM5	Q96HS1	289 aa		10.05	□□□□□ -0.8

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