RNA–Protein interactions for RNA: ENST00000495308.5

FDPS-219, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 808 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-219ENST00000495308 TMEM244Q5VVB8 128 aa11.4□□□□□ -0.58
FDPS-219ENST00000495308 TMPRSS11AQ6ZMR5 421 aa11.4□□□□□ -0.58
FDPS-219ENST00000495308 LRRC28Q86X40 367 aaPredicted RBP11.4□□□□□ -0.58
FDPS-219ENST00000495308 C11orf53Q8IXP5 236 aa11.4□□□□□ -0.58
FDPS-219ENST00000495308 OR51A4Q8NGJ6 313 aa11.4□□□□□ -0.58
FDPS-219ENST00000495308 SGCDQ92629 289 aa11.4□□□□□ -0.58
FDPS-219ENST00000495308 RPL3LQ92901 407 aaKnown RBP11.4□□□□□ -0.58
FDPS-219ENST00000495308 CNBD2Q96M20 576 aa11.4□□□□□ -0.58
FDPS-219ENST00000495308 HIST1H2AAQ96QV6 131 aa11.4□□□□□ -0.58
FDPS-219ENST00000495308 PDCD1LG2Q9BQ51 273 aa11.4□□□□□ -0.58
FDPS-219ENST00000495308 FKBP14Q9NWM8 211 aa11.4□□□□□ -0.58
FDPS-219ENST00000495308 PAK1IP1Q9NWT1 392 aaPredicted RBP11.4□□□□□ -0.58
FDPS-219ENST00000495308 CAB39Q9Y376 341 aaPredicted RBP11.4□□□□□ -0.58
FDPS-219ENST00000495308 PCDHGB5Q9Y5G0 923 aa11.4□□□□□ -0.58
FDPS-219ENST00000495308 DOCK11Q5JSL3 2073 aa11.39□□□□□ -0.59
FDPS-219ENST00000495308 PPIAL4EA0A075B759 164 aa11.39□□□□□ -0.59
FDPS-219ENST00000495308 TRBV2A0A0J9YWF9 115 aa11.39□□□□□ -0.59
FDPS-219ENST00000495308 TMEM210A6NLX4 147 aa11.39□□□□□ -0.59
FDPS-219ENST00000495308 PTGES3LE9PB15 166 aa11.39□□□□□ -0.59
FDPS-219ENST00000495308 PPIAL4DF5H284 164 aa11.39□□□□□ -0.59
FDPS-219ENST00000495308 CDIPTO14735 213 aa11.39□□□□□ -0.59
FDPS-219ENST00000495308 LALBAP00709 142 aa11.39□□□□□ -0.59
FDPS-219ENST00000495308 TGFAP01135 160 aa11.39□□□□□ -0.59
FDPS-219ENST00000495308 ISG15P05161 165 aa11.39□□□□□ -0.59
FDPS-219ENST00000495308 PPIAL4FP0DN26 164 aa11.39□□□□□ -0.59
FDPS-219ENST00000495308 C21orf33P30042 268 aaPredicted RBP11.39□□□□□ -0.59
FDPS-219ENST00000495308 MDH2P40926 338 aaKnown RBP11.39□□□□□ -0.59
FDPS-219ENST00000495308 CDH15P55291 814 aa11.39□□□□□ -0.59
FDPS-219ENST00000495308 TMEM155Q4W5P6 130 aa11.39□□□□□ -0.59
FDPS-219ENST00000495308 TMEM42Q69YG0 159 aa11.39□□□□□ -0.59
FDPS-219ENST00000495308 SFRP4Q6FHJ7 346 aaPredicted RBP11.39□□□□□ -0.59
FDPS-219ENST00000495308 WDR82Q6UXN9 313 aa11.39□□□□□ -0.59
FDPS-219ENST00000495308 SPICQ8N5J4 248 aa11.39□□□□□ -0.59
FDPS-219ENST00000495308 GCSAMQ8N6F7 178 aa11.39□□□□□ -0.59
FDPS-219ENST00000495308 LINC01356Q8N9X3 169 aa11.39□□□□□ -0.59
FDPS-219ENST00000495308 SCCPDHQ8NBX0 429 aa11.39□□□□□ -0.59
FDPS-219ENST00000495308 DEFB108BQ8NET1 73 aa11.39□□□□□ -0.59
FDPS-219ENST00000495308 NPRL2Q8WTW4 380 aa11.39□□□□□ -0.59
FDPS-219ENST00000495308 LRRC29Q8WV35 223 aa11.39□□□□□ -0.59
FDPS-219ENST00000495308 GATAD2BQ8WXI9 593 aa11.39□□□□□ -0.59
FDPS-219ENST00000495308 ITFG2Q969R8 447 aa11.39□□□□□ -0.59
FDPS-219ENST00000495308 RAB39BQ96DA2 213 aa11.39□□□□□ -0.59
FDPS-219ENST00000495308 ADAT3Q96EY9 351 aaPredicted RBP11.39□□□□□ -0.59
FDPS-219ENST00000495308 C1orf159Q96HA4 380 aa11.39□□□□□ -0.59
FDPS-219ENST00000495308 TLNRD1Q9H1K6 362 aa11.39□□□□□ -0.59
FDPS-219ENST00000495308 TMEM165Q9HC07 324 aa11.39□□□□□ -0.59
FDPS-219ENST00000495308 CHCHD3Q9NX63 227 aaKnown RBP11.39□□□□□ -0.59
FDPS-219ENST00000495308 ERVK-18Q9QC07 812 aa11.39□□□□□ -0.59
FDPS-219ENST00000495308 PCDHB10Q9UN67 800 aa11.39□□□□□ -0.59
FDPS-219ENST00000495308 PPIAL4AQ9Y536 164 aa11.39□□□□□ -0.59
FDPS-219ENST00000495308 ANKRD61A6NGH8 418 aa11.38□□□□□ -0.59
FDPS-219ENST00000495308 OR5B21A6NL26 309 aa11.38□□□□□ -0.59
FDPS-219ENST00000495308 CEACAM18A8MTB9 384 aa11.38□□□□□ -0.59
FDPS-219ENST00000495308 ZFPL1O95159 310 aa11.38□□□□□ -0.59
FDPS-219ENST00000495308 CCDC159P0C7I6 412 aa11.38□□□□□ -0.59
FDPS-219ENST00000495308 TGM4P49221 684 aa11.38□□□□□ -0.59
FDPS-219ENST00000495308 GMFBP60983 142 aa11.38□□□□□ -0.59
FDPS-219ENST00000495308 SEC61A1P61619 476 aaKnown RBP11.38□□□□□ -0.59
FDPS-219ENST00000495308 GNG3P63215 75 aa11.38□□□□□ -0.59
FDPS-219ENST00000495308 MRPL28Q13084 256 aaKnown RBP11.38□□□□□ -0.59
FDPS-219ENST00000495308 MED21Q13503 144 aa11.38□□□□□ -0.59
FDPS-219ENST00000495308 DOC2BQ14184 412 aa11.38□□□□□ -0.59
FDPS-219ENST00000495308 CDK5R1Q15078 307 aa11.38□□□□□ -0.59
FDPS-219ENST00000495308 ZNF404Q494X3 552 aa11.38□□□□□ -0.59
FDPS-219ENST00000495308 FAM76BQ5HYJ3 339 aa11.38□□□□□ -0.59
FDPS-219ENST00000495308 FAM166AQ6J272 317 aa11.38□□□□□ -0.59
FDPS-219ENST00000495308 EGFL6Q8IUX8 553 aa11.38□□□□□ -0.59
FDPS-219ENST00000495308 MUC20Q8N307 709 aaPredicted RBP11.38□□□□□ -0.59
FDPS-219ENST00000495308 CCDC54Q8NEL0 328 aa11.38□□□□□ -0.59
FDPS-219ENST00000495308 OR5A2Q8NGI9 324 aa11.38□□□□□ -0.59
FDPS-219ENST00000495308 OR13C3Q8NGS6 347 aa11.38□□□□□ -0.59
FDPS-219ENST00000495308 OR52N1Q8NH53 320 aa11.38□□□□□ -0.59
FDPS-219ENST00000495308 OR5AK2Q8NH90 309 aa11.38□□□□□ -0.59
FDPS-219ENST00000495308 TRMT10AQ8TBZ6 339 aaKnown RBP11.38□□□□□ -0.59
FDPS-219ENST00000495308 FGGYQ96C11 551 aa11.38□□□□□ -0.59
FDPS-219ENST00000495308 TMEM246Q9BRR3 403 aa11.38□□□□□ -0.59
FDPS-219ENST00000495308 OR51I2Q9H344 312 aa11.38□□□□□ -0.59
FDPS-219ENST00000495308 SCN3BQ9NY72 215 aa11.38□□□□□ -0.59
FDPS-219ENST00000495308 RAB26Q9ULW5 256 aa11.38□□□□□ -0.59
FDPS-219ENST00000495308 HHLA2Q9UM44 414 aa11.38□□□□□ -0.59
FDPS-219ENST00000495308 SIRT4Q9Y6E7 314 aaPredicted RBP11.38□□□□□ -0.59
FDPS-219ENST00000495308 IGHV3OR15-7A0A075B7D8 119 aa11.37□□□□□ -0.59
FDPS-219ENST00000495308 TMEM212A6NML5 194 aa11.37□□□□□ -0.59
FDPS-219ENST00000495308 A8MV72 311 aaPredicted RBP11.37□□□□□ -0.59
FDPS-219ENST00000495308 B4DSR2 109 aa11.37□□□□□ -0.59
FDPS-219ENST00000495308 MYL12BO14950 172 aa11.37□□□□□ -0.59
FDPS-219ENST00000495308 RRP9O43818 475 aaKnown RBP11.37□□□□□ -0.59
FDPS-219ENST00000495308 RHBDL1O75783 438 aa11.37□□□□□ -0.59
FDPS-219ENST00000495308 CDK1P06493 297 aa11.37□□□□□ -0.59
FDPS-219ENST00000495308 MSMBP08118 114 aa11.37□□□□□ -0.59
FDPS-219ENST00000495308 RPS2P15880 293 aaKnown RBP11.37□□□□□ -0.59
FDPS-219ENST00000495308 ZNF12P17014 697 aa11.37□□□□□ -0.59
FDPS-219ENST00000495308 ZNF20P17024 532 aa11.37□□□□□ -0.59
FDPS-219ENST00000495308 UBE2V2Q15819 145 aa11.37□□□□□ -0.59
FDPS-219ENST00000495308 HAGHLQ6PII5 290 aaPredicted RBP11.37□□□□□ -0.59
FDPS-219ENST00000495308 LYPD2Q6UXB3 125 aa11.37□□□□□ -0.59
FDPS-219ENST00000495308 ZFP41Q8N8Y5 198 aa11.37□□□□□ -0.59
FDPS-219ENST00000495308 ZNF485Q8NCK3 441 aa11.37□□□□□ -0.59
FDPS-219ENST00000495308 RGP1Q92546 391 aaPredicted RBP11.37□□□□□ -0.59
FDPS-219ENST00000495308 SEH1LQ96EE3 360 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms