RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 H3BSH0 61 aa10.77□□□□□ -0.69
COL5A1-206ENST00000465877 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.77□□□□□ -0.69
COL5A1-206ENST00000465877 J3QLI3 93 aa10.77□□□□□ -0.69
COL5A1-206ENST00000465877 CDIPTO14735 213 aa10.77□□□□□ -0.69
COL5A1-206ENST00000465877 SYT7O43581 403 aa10.77□□□□□ -0.69
COL5A1-206ENST00000465877 LHBP01229 141 aa10.77□□□□□ -0.69
COL5A1-206ENST00000465877 IFNA2P01563 188 aa10.77□□□□□ -0.69
COL5A1-206ENST00000465877 WNT2P09544 360 aa10.77□□□□□ -0.69
COL5A1-206ENST00000465877 CPT2P23786 658 aa10.77□□□□□ -0.69
COL5A1-206ENST00000465877 OR12D2P58182 307 aa10.77□□□□□ -0.69
COL5A1-206ENST00000465877 GNB2P62879 340 aa10.77□□□□□ -0.69
COL5A1-206ENST00000465877 GNG3P63215 75 aa10.77□□□□□ -0.69
COL5A1-206ENST00000465877 SMN1Q16637 294 aaKnown RBP10.77□□□□□ -0.69
COL5A1-206ENST00000465877 CEACAM21Q3KPI0 293 aa10.77□□□□□ -0.69
COL5A1-206ENST00000465877 DMRTC1Q5HYR2 192 aa10.77□□□□□ -0.69
COL5A1-206ENST00000465877 TEX36Q5VZQ5 186 aa10.77□□□□□ -0.69
COL5A1-206ENST00000465877 TTC23Q5W5X9 447 aa10.77□□□□□ -0.69
COL5A1-206ENST00000465877 FAHD2BQ6P2I3 314 aaPredicted RBP10.77□□□□□ -0.69
COL5A1-206ENST00000465877 LYPD2Q6UXB3 125 aa10.77□□□□□ -0.69
COL5A1-206ENST00000465877 FAM90A1Q86YD7 464 aa10.77□□□□□ -0.69
COL5A1-206ENST00000465877 SCCPDHQ8NBX0 429 aa10.77□□□□□ -0.69
COL5A1-206ENST00000465877 SETD9Q8NE22 299 aa10.77□□□□□ -0.69
COL5A1-206ENST00000465877 OR52I1Q8NGK6 324 aa10.77□□□□□ -0.69
COL5A1-206ENST00000465877 OR14K1Q8NGZ2 314 aa10.77□□□□□ -0.69
COL5A1-206ENST00000465877 CNIH3Q8TBE1 160 aa10.77□□□□□ -0.69
COL5A1-206ENST00000465877 RNF166Q96A37 237 aaPredicted RBP10.77□□□□□ -0.69
COL5A1-206ENST00000465877 FAHD2AQ96GK7 314 aa10.77□□□□□ -0.69
COL5A1-206ENST00000465877 RNF170Q96K19 258 aa10.77□□□□□ -0.69
COL5A1-206ENST00000465877 C4orf36Q96KX1 117 aa10.77□□□□□ -0.69
COL5A1-206ENST00000465877 HIST1H2AAQ96QV6 131 aa10.77□□□□□ -0.69
COL5A1-206ENST00000465877 CTSZQ9UBR2 303 aa10.77□□□□□ -0.69
COL5A1-206ENST00000465877 CLN8Q9UBY8 286 aa10.77□□□□□ -0.69
COL5A1-206ENST00000465877 POLR3KQ9Y2Y1 108 aaPredicted RBP10.77□□□□□ -0.69
COL5A1-206ENST00000465877 FBN1P35555 2871 aaKnown RBP10.77□□□□□ -0.69
COL5A1-206ENST00000465877 LOC105371242A0A075B767 164 aa10.76□□□□□ -0.69
COL5A1-206ENST00000465877 ZNF732B4DXR9 585 aa10.76□□□□□ -0.69
COL5A1-206ENST00000465877 TRAPPC2LH3BP13 241 aa10.76□□□□□ -0.69
COL5A1-206ENST00000465877 FADS2O95864 444 aaKnown RBP10.76□□□□□ -0.69
COL5A1-206ENST00000465877 NRASP01111 189 aa10.76□□□□□ -0.69
COL5A1-206ENST00000465877 AVPP01185 164 aa10.76□□□□□ -0.69
COL5A1-206ENST00000465877 GYPAP02724 150 aa10.76□□□□□ -0.69
COL5A1-206ENST00000465877 ZNF12P17014 697 aa10.76□□□□□ -0.69
COL5A1-206ENST00000465877 ADARB1P78563 741 aaKnown RBP10.76□□□□□ -0.69
COL5A1-206ENST00000465877 IL18R1Q13478 541 aa10.76□□□□□ -0.69
COL5A1-206ENST00000465877 FAM76BQ5HYJ3 339 aa10.76□□□□□ -0.69
COL5A1-206ENST00000465877 CLVS2Q5SYC1 327 aa10.76□□□□□ -0.69
COL5A1-206ENST00000465877 TMEM42Q69YG0 159 aa10.76□□□□□ -0.69
COL5A1-206ENST00000465877 C1orf229Q6ZS94 237 aaPredicted RBP10.76□□□□□ -0.69
COL5A1-206ENST00000465877 DHRSXQ8N5I4 330 aa10.76□□□□□ -0.69
COL5A1-206ENST00000465877 OR10Z1Q8NGY1 313 aa10.76□□□□□ -0.69
COL5A1-206ENST00000465877 OR2G2Q8NGZ5 317 aa10.76□□□□□ -0.69
COL5A1-206ENST00000465877 PELI1Q96FA3 418 aa10.76□□□□□ -0.69
COL5A1-206ENST00000465877 MRPL48Q96GC5 212 aaKnown RBP10.76□□□□□ -0.69
COL5A1-206ENST00000465877 TECTBQ96PL2 329 aa10.76□□□□□ -0.69
COL5A1-206ENST00000465877 VCXQ9H320 206 aa10.76□□□□□ -0.69
COL5A1-206ENST00000465877 MMP26Q9NRE1 261 aa10.76□□□□□ -0.69
COL5A1-206ENST00000465877 INPP5EQ9NRR6 644 aa10.76□□□□□ -0.69
COL5A1-206ENST00000465877 GPR173Q9NS66 373 aa10.76□□□□□ -0.69
COL5A1-206ENST00000465877 MRPS18AQ9NVS2 196 aaKnown RBP10.76□□□□□ -0.69
COL5A1-206ENST00000465877 ERVK13-1Q9NX77 482 aa10.76□□□□□ -0.69
COL5A1-206ENST00000465877 RPL36Q9Y3U8 105 aaKnown RBP10.76□□□□□ -0.69
COL5A1-206ENST00000465877 ANKRD61A6NGH8 418 aa10.75□□□□□ -0.69
COL5A1-206ENST00000465877 A6NIN4 97 aa10.75□□□□□ -0.69
COL5A1-206ENST00000465877 J3QLW9 94 aa10.75□□□□□ -0.69
COL5A1-206ENST00000465877 ADAM20O43506 726 aa10.75□□□□□ -0.69
COL5A1-206ENST00000465877 HTR1AP08908 422 aa10.75□□□□□ -0.69
COL5A1-206ENST00000465877 ZNF19P17023 458 aa10.75□□□□□ -0.69
COL5A1-206ENST00000465877 ADRA2CP18825 462 aa10.75□□□□□ -0.69
COL5A1-206ENST00000465877 CFHR2P36980 270 aa10.75□□□□□ -0.69
COL5A1-206ENST00000465877 CAPGP40121 348 aa10.75□□□□□ -0.69
COL5A1-206ENST00000465877 NANOS3P60323 173 aaKnown RBP10.75□□□□□ -0.69
COL5A1-206ENST00000465877 GMFBP60983 142 aa10.75□□□□□ -0.69
COL5A1-206ENST00000465877 GALEQ14376 348 aa10.75□□□□□ -0.69
COL5A1-206ENST00000465877 MICBQ29980 383 aa10.75□□□□□ -0.69
COL5A1-206ENST00000465877 WDR25Q64LD2 544 aaPredicted RBP10.75□□□□□ -0.69
COL5A1-206ENST00000465877 FDX2Q6P4F2 183 aa10.75□□□□□ -0.69
COL5A1-206ENST00000465877 MOB3CQ70IA8 216 aa10.75□□□□□ -0.69
COL5A1-206ENST00000465877 C1QL2Q7Z5L3 287 aa10.75□□□□□ -0.69
COL5A1-206ENST00000465877 KCTD20Q7Z5Y7 419 aa10.75□□□□□ -0.69
COL5A1-206ENST00000465877 LHFPL3Q86UP9 236 aa10.75□□□□□ -0.69
COL5A1-206ENST00000465877 SYS1Q8N2H4 156 aa10.75□□□□□ -0.69
COL5A1-206ENST00000465877 TEX29Q8N6K0 151 aa10.75□□□□□ -0.69
COL5A1-206ENST00000465877 CCDC54Q8NEL0 328 aa10.75□□□□□ -0.69
COL5A1-206ENST00000465877 OR5A2Q8NGI9 324 aa10.75□□□□□ -0.69
COL5A1-206ENST00000465877 DACT3Q96B18 629 aaPredicted RBP10.75□□□□□ -0.69
COL5A1-206ENST00000465877 MYCBPQ99417 103 aaPredicted RBP10.75□□□□□ -0.69
COL5A1-206ENST00000465877 ZNF649Q9BS31 505 aa10.75□□□□□ -0.69
COL5A1-206ENST00000465877 JAM3Q9BX67 310 aa10.75□□□□□ -0.69
COL5A1-206ENST00000465877 CHST5Q9GZS9 411 aa10.75□□□□□ -0.69
COL5A1-206ENST00000465877 C7orf69Q9H7B7 122 aa10.75□□□□□ -0.69
COL5A1-206ENST00000465877 SMURF1Q9HCE7 757 aa10.75□□□□□ -0.69
COL5A1-206ENST00000465877 NKX1-2Q9UD57 310 aaPredicted RBP10.75□□□□□ -0.69
COL5A1-206ENST00000465877 INSIG2Q9Y5U4 225 aa10.75□□□□□ -0.69
COL5A1-206ENST00000465877 IGHV2-70DA0A0C4DH43 119 aa10.74□□□□□ -0.69
COL5A1-206ENST00000465877 H0YAE9 185 aa10.74□□□□□ -0.69
COL5A1-206ENST00000465877 TMPRSS2O15393 492 aa10.74□□□□□ -0.69
COL5A1-206ENST00000465877 AKR7A2O43488 359 aa10.74□□□□□ -0.69
COL5A1-206ENST00000465877 NDUFA2O43678 99 aa10.74□□□□□ -0.69
COL5A1-206ENST00000465877 GNAO1P09471 354 aa10.74□□□□□ -0.69
COL5A1-206ENST00000465877 MUC1P15941 1255 aaPredicted RBP10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms