RNA–Protein interactions for RNA: ENST00000436282.1

TOP3B-206, Transcript of DNA topoisomerase III beta, humanhuman

TSL 2

Gene TOP3B, Length 2,890 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-206ENST00000436282 OR1L3Q8NH93 324 aa13.17□□□□□ -0.3
TOP3B-206ENST00000436282 CYYR1Q96J86 154 aa13.17□□□□□ -0.3
TOP3B-206ENST00000436282 EHFQ9NZC4 300 aa13.17□□□□□ -0.3
TOP3B-206ENST00000436282 A0A1W2PP11 408 aa13.17□□□□□ -0.3
TOP3B-206ENST00000436282 hCG_1809904A0A1W2PP81 198 aa13.17□□□□□ -0.3
TOP3B-206ENST00000436282 A0A1W2PR64 198 aa13.17□□□□□ -0.3
TOP3B-206ENST00000436282 A0A1W2PRV1 198 aa13.17□□□□□ -0.3
TOP3B-206ENST00000436282 AP4M1O00189 453 aa13.17□□□□□ -0.3
TOP3B-206ENST00000436282 IFNA2P01563 188 aa13.17□□□□□ -0.3
TOP3B-206ENST00000436282 NQO2P16083 231 aa13.17□□□□□ -0.3
TOP3B-206ENST00000436282 LAP3P28838 519 aa13.17□□□□□ -0.3
TOP3B-206ENST00000436282 PTGER4P35408 488 aa13.17□□□□□ -0.3
TOP3B-206ENST00000436282 RBMXP38159 391 aaKnown RBP13.17□□□□□ -0.3
TOP3B-206ENST00000436282 UCP2P55851 309 aa13.17□□□□□ -0.3
TOP3B-206ENST00000436282 CSNK2A1P68400 391 aaPredicted RBP13.17□□□□□ -0.3
TOP3B-206ENST00000436282 GUK1Q16774 197 aa13.17□□□□□ -0.3
TOP3B-206ENST00000436282 C9orf40Q8IXQ3 194 aa13.17□□□□□ -0.3
TOP3B-206ENST00000436282 CSNK2A3Q8NEV1 391 aa13.17□□□□□ -0.3
TOP3B-206ENST00000436282 PRRX2Q99811 253 aa13.17□□□□□ -0.3
TOP3B-206ENST00000436282 URM1Q9BTM9 101 aaKnown RBP13.17□□□□□ -0.3
TOP3B-206ENST00000436282 ST6GALNAC5Q9BVH7 336 aa13.17□□□□□ -0.3
TOP3B-206ENST00000436282 SCRT1Q9BWW7 348 aa13.17□□□□□ -0.3
TOP3B-206ENST00000436282 SPACA1Q9HBV2 294 aa13.17□□□□□ -0.3
TOP3B-206ENST00000436282 AMDHD2Q9Y303 409 aa13.17□□□□□ -0.3
TOP3B-206ENST00000436282 NPIPB13A6NJU9 1138 aa13.16□□□□□ -0.3
TOP3B-206ENST00000436282 NPIPB4C9JG80 1138 aa13.16□□□□□ -0.3
TOP3B-206ENST00000436282 GATCO43716 136 aaKnown RBP13.16□□□□□ -0.3
TOP3B-206ENST00000436282 CRTAPO75718 401 aaPredicted RBP13.16□□□□□ -0.3
TOP3B-206ENST00000436282 SNU13P55769 128 aaKnown RBP13.16□□□□□ -0.3
TOP3B-206ENST00000436282 MOB1AQ9H8S9 216 aa13.16□□□□□ -0.3
TOP3B-206ENST00000436282 UCK1Q9HA47 277 aa13.16□□□□□ -0.3
TOP3B-206ENST00000436282 C14orf166Q9Y224 244 aaKnown RBP13.16□□□□□ -0.3
TOP3B-206ENST00000436282 COL5A1P20908 1838 aaPredicted RBP13.16□□□□□ -0.3
TOP3B-206ENST00000436282 FOLR1P15328 257 aa13.16□□□□□ -0.3
TOP3B-206ENST00000436282 POU3F1Q03052 451 aaPredicted RBP13.16□□□□□ -0.3
TOP3B-206ENST00000436282 ACER2Q5QJU3 275 aa13.16□□□□□ -0.3
TOP3B-206ENST00000436282 FNDC9Q8TBE3 224 aa13.16□□□□□ -0.3
TOP3B-206ENST00000436282 SMIM3Q9BZL3 60 aa13.16□□□□□ -0.3
TOP3B-206ENST00000436282 BCL2L14Q9BZR8 327 aa13.16□□□□□ -0.3
TOP3B-206ENST00000436282 MED29Q9NX70 200 aa13.16□□□□□ -0.3
TOP3B-206ENST00000436282 TUBD1Q9UJT1 453 aa13.16□□□□□ -0.3
TOP3B-206ENST00000436282 IGKV3D-11A0A0A0MRZ8 115 aa13.15□□□□□ -0.3
TOP3B-206ENST00000436282 KNG1P01042 644 aa13.15□□□□□ -0.3
TOP3B-206ENST00000436282 FBP1P09467 338 aa13.15□□□□□ -0.3
TOP3B-206ENST00000436282 PRF1P14222 555 aa13.15□□□□□ -0.3
TOP3B-206ENST00000436282 DAOP14920 347 aa13.15□□□□□ -0.3
TOP3B-206ENST00000436282 FBLP22087 321 aaKnown RBP13.15□□□□□ -0.3
TOP3B-206ENST00000436282 DHPSP49366 369 aaPredicted RBP13.15□□□□□ -0.3
TOP3B-206ENST00000436282 ZNF84P51523 738 aa13.15□□□□□ -0.3
TOP3B-206ENST00000436282 HSD11B2P80365 405 aa13.15□□□□□ -0.3
TOP3B-206ENST00000436282 HSF1Q00613 529 aa13.15□□□□□ -0.3
TOP3B-206ENST00000436282 RHEBQ15382 184 aa13.15□□□□□ -0.3
TOP3B-206ENST00000436282 ZNF600Q6ZNG1 722 aa13.15□□□□□ -0.3
TOP3B-206ENST00000436282 H1FNTQ75WM6 255 aaPredicted RBP13.15□□□□□ -0.3
TOP3B-206ENST00000436282 TDHQ8IZJ6 230 aa13.15□□□□□ -0.3
TOP3B-206ENST00000436282 RSRP1Q9BUV0 290 aa13.15□□□□□ -0.3
TOP3B-206ENST00000436282 C20orf24Q9BUV8 137 aa13.15□□□□□ -0.3
TOP3B-206ENST00000436282 PARP12Q9H0J9 701 aaKnown RBP13.15□□□□□ -0.3
TOP3B-206ENST00000436282 ARV1Q9H2C2 271 aa13.15□□□□□ -0.3
TOP3B-206ENST00000436282 TMPRSS5Q9H3S3 457 aa13.15□□□□□ -0.3
TOP3B-206ENST00000436282 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.15□□□□□ -0.3
TOP3B-206ENST00000436282 IGHV3-20A0A0C4DH32 117 aa13.15□□□□□ -0.3
TOP3B-206ENST00000436282 HCKP08631 526 aa13.15□□□□□ -0.3
TOP3B-206ENST00000436282 CFHR1Q03591 330 aa13.15□□□□□ -0.3
TOP3B-206ENST00000436282 COMMD2Q86X83 199 aa13.15□□□□□ -0.3
TOP3B-206ENST00000436282 RAB33BQ9H082 229 aa13.15□□□□□ -0.3
TOP3B-206ENST00000436282 OR10A2Q9H208 303 aa13.15□□□□□ -0.3
TOP3B-206ENST00000436282 NME2P1O60361 137 aa13.14□□□□□ -0.31
TOP3B-206ENST00000436282 DANCRP0C864 163 aa13.14□□□□□ -0.31
TOP3B-206ENST00000436282 SULT1A1P50225 295 aa13.14□□□□□ -0.31
TOP3B-206ENST00000436282 ADAM5Q6NVV9 412 aa13.14□□□□□ -0.31
TOP3B-206ENST00000436282 C16orf47Q6ZP98 133 aaPredicted RBP13.14□□□□□ -0.31
TOP3B-206ENST00000436282 LANCL3Q6ZV70 420 aa13.14□□□□□ -0.31
TOP3B-206ENST00000436282 ABHD12BQ7Z5M8 362 aaPredicted RBP13.14□□□□□ -0.31
TOP3B-206ENST00000436282 FAM24BQ8N5W8 94 aa13.14□□□□□ -0.31
TOP3B-206ENST00000436282 OR1J1Q8NGS3 322 aa13.14□□□□□ -0.31
TOP3B-206ENST00000436282 EIF5A2Q9GZV4 153 aaKnown RBP13.14□□□□□ -0.31
TOP3B-206ENST00000436282 WWTR1Q9GZV5 400 aa13.14□□□□□ -0.31
TOP3B-206ENST00000436282 PLEKHA2Q9HB19 425 aa13.14□□□□□ -0.31
TOP3B-206ENST00000436282 SUSD2Q9UGT4 822 aa13.14□□□□□ -0.31
TOP3B-206ENST00000436282 IGHV1OR21-1A0A087WYE8 117 aa13.14□□□□□ -0.31
TOP3B-206ENST00000436282 SEC11BP0C7V7 166 aa13.14□□□□□ -0.31
TOP3B-206ENST00000436282 ZNF616Q08AN1 781 aa13.14□□□□□ -0.31
TOP3B-206ENST00000436282 TMPRSS9Q7Z410 1059 aa13.14□□□□□ -0.31
TOP3B-206ENST00000436282 C17orf82Q86X59 251 aaPredicted RBP13.14□□□□□ -0.31
TOP3B-206ENST00000436282 FAM89BQ8N5H3 189 aa13.14□□□□□ -0.31
TOP3B-206ENST00000436282 MFSD8Q8NHS3 518 aa13.14□□□□□ -0.31
TOP3B-206ENST00000436282 TMEM234Q8WY98 164 aa13.14□□□□□ -0.31
TOP3B-206ENST00000436282 GPER1Q99527 375 aa13.14□□□□□ -0.31
TOP3B-206ENST00000436282 PHF7Q9BWX1 381 aaPredicted RBP13.14□□□□□ -0.31
TOP3B-206ENST00000436282 LUZP4Q9P127 313 aa13.14□□□□□ -0.31
TOP3B-206ENST00000436282 PPP4R1LQ9P1A2 415 aa13.14□□□□□ -0.31
TOP3B-206ENST00000436282 WDR87Q6ZQQ6 2873 aa13.14□□□□□ -0.31
TOP3B-206ENST00000436282 TRBV23-1A0A0A0MS06 115 aa13.14□□□□□ -0.31
TOP3B-206ENST00000436282 UMAD1C9J7I0 102 aa13.14□□□□□ -0.31
TOP3B-206ENST00000436282 WRBO00258 174 aa13.14□□□□□ -0.31
TOP3B-206ENST00000436282 PPIHO43447 177 aaKnown RBP13.14□□□□□ -0.31
TOP3B-206ENST00000436282 PIAS2O75928 621 aa13.14□□□□□ -0.31
TOP3B-206ENST00000436282 NXPH1P58417 271 aa13.14□□□□□ -0.31
TOP3B-206ENST00000436282 TLE3Q04726 772 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms