RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 C12orf42Q96LP6 360 aa2.87□□□□□ -1.95
SDCBPP3-201ENST00000419629 ZFP3Q96NJ6 502 aa2.87□□□□□ -1.95
SDCBPP3-201ENST00000419629 ABHD1Q96SE0 405 aa2.87□□□□□ -1.95
SDCBPP3-201ENST00000419629 CNN2Q99439 309 aaKnown RBP2.87□□□□□ -1.95
SDCBPP3-201ENST00000419629 STACQ99469 402 aa2.87□□□□□ -1.95
SDCBPP3-201ENST00000419629 TXN2Q99757 166 aa2.87□□□□□ -1.95
SDCBPP3-201ENST00000419629 NIPSNAP1Q9BPW8 284 aa2.87□□□□□ -1.95
SDCBPP3-201ENST00000419629 MICU1Q9BPX6 476 aa2.87□□□□□ -1.95
SDCBPP3-201ENST00000419629 AIF1LQ9BQI0 150 aa2.87□□□□□ -1.95
SDCBPP3-201ENST00000419629 ATG101Q9BSB4 218 aa2.87□□□□□ -1.95
SDCBPP3-201ENST00000419629 PBDC1Q9BVG4 233 aa2.87□□□□□ -1.95
SDCBPP3-201ENST00000419629 ZNF350Q9GZX5 532 aa2.87□□□□□ -1.95
SDCBPP3-201ENST00000419629 MFSD1Q9H3U5 465 aa2.87□□□□□ -1.95
SDCBPP3-201ENST00000419629 SMDT1Q9H4I9 107 aa2.87□□□□□ -1.95
SDCBPP3-201ENST00000419629 ACTL8Q9H568 366 aa2.87□□□□□ -1.95
SDCBPP3-201ENST00000419629 IKZF5Q9H5V7 419 aa2.87□□□□□ -1.95
SDCBPP3-201ENST00000419629 RERGLQ9H628 205 aa2.87□□□□□ -1.95
SDCBPP3-201ENST00000419629 TPT1P8Q9HAU6 139 aa2.87□□□□□ -1.95
SDCBPP3-201ENST00000419629 BEX1Q9HBH7 125 aa2.87□□□□□ -1.95
SDCBPP3-201ENST00000419629 LRTM1Q9HBL6 345 aa2.87□□□□□ -1.95
SDCBPP3-201ENST00000419629 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.87□□□□□ -1.95
SDCBPP3-201ENST00000419629 HAO2Q9NYQ3 351 aa2.87□□□□□ -1.95
SDCBPP3-201ENST00000419629 TAS2R13Q9NYV9 303 aa2.87□□□□□ -1.95
SDCBPP3-201ENST00000419629 SLC25A37Q9NYZ2 338 aa2.87□□□□□ -1.95
SDCBPP3-201ENST00000419629 NUDT4Q9NZJ9 180 aa2.87□□□□□ -1.95
SDCBPP3-201ENST00000419629 DNAJC27Q9NZQ0 273 aa2.87□□□□□ -1.95
SDCBPP3-201ENST00000419629 WRAP73Q9P2S5 460 aaPredicted RBP2.87□□□□□ -1.95
SDCBPP3-201ENST00000419629 CACFD1Q9UGQ2 172 aa2.87□□□□□ -1.95
SDCBPP3-201ENST00000419629 PITPNC1Q9UKF7 332 aa2.87□□□□□ -1.95
SDCBPP3-201ENST00000419629 OR52A1Q9UKL2 312 aa2.87□□□□□ -1.95
SDCBPP3-201ENST00000419629 ASF1AQ9Y294 204 aa2.87□□□□□ -1.95
SDCBPP3-201ENST00000419629 EXOGQ9Y2C4 368 aaKnown RBP2.87□□□□□ -1.95
SDCBPP3-201ENST00000419629 PRSS21Q9Y6M0 314 aa2.87□□□□□ -1.95
SDCBPP3-201ENST00000419629 DENND4AQ7Z401 1863 aa2.87□□□□□ -1.95
SDCBPP3-201ENST00000419629 LY75O60449 1722 aa2.87□□□□□ -1.95
SDCBPP3-201ENST00000419629 DSPPQ9NZW4 1301 aa2.87□□□□□ -1.95
SDCBPP3-201ENST00000419629 ZFC3H1O60293 1989 aaKnown RBP2.87□□□□□ -1.95
SDCBPP3-201ENST00000419629 SCN9AQ15858 1988 aa2.87□□□□□ -1.95
SDCBPP3-201ENST00000419629 RGPD3A6NKT7 1758 aaPredicted RBP2.87□□□□□ -1.95
SDCBPP3-201ENST00000419629 RGPD4Q7Z3J3 1758 aa2.87□□□□□ -1.95
SDCBPP3-201ENST00000419629 FOCADQ5VW36 1801 aa2.86□□□□□ -1.95
SDCBPP3-201ENST00000419629 PHLPP1O60346 1717 aa2.86□□□□□ -1.95
SDCBPP3-201ENST00000419629 A0A087WWC5 75 aa2.86□□□□□ -1.95
SDCBPP3-201ENST00000419629 TRAV14DV4A0A0A6YYC5 116 aa2.86□□□□□ -1.95
SDCBPP3-201ENST00000419629 EDDM13A0A1B0GTR0 161 aa2.86□□□□□ -1.95
SDCBPP3-201ENST00000419629 TRBC2A0A5B9 178 aa2.86□□□□□ -1.95
SDCBPP3-201ENST00000419629 ANKRD20A5PA0PJZ0 165 aa2.86□□□□□ -1.95
SDCBPP3-201ENST00000419629 SMIM30A4D0T7 59 aa2.86□□□□□ -1.95
SDCBPP3-201ENST00000419629 NKX6-3A6NJ46 265 aa2.86□□□□□ -1.95
SDCBPP3-201ENST00000419629 H3BN98 237 aa2.86□□□□□ -1.95
SDCBPP3-201ENST00000419629 FAAHO00519 579 aa2.86□□□□□ -1.95
SDCBPP3-201ENST00000419629 TAAR5O14804 337 aa2.86□□□□□ -1.95
SDCBPP3-201ENST00000419629 SCAMP2O15127 329 aaKnown RBP2.86□□□□□ -1.95
SDCBPP3-201ENST00000419629 ADAM20O43506 726 aa2.86□□□□□ -1.95
SDCBPP3-201ENST00000419629 OR10H3O60404 316 aa2.86□□□□□ -1.95
SDCBPP3-201ENST00000419629 CLDN11O75508 207 aa2.86□□□□□ -1.95
SDCBPP3-201ENST00000419629 ECI2O75521 394 aa2.86□□□□□ -1.95
SDCBPP3-201ENST00000419629 ERAL1O75616 437 aaKnown RBP2.86□□□□□ -1.95
SDCBPP3-201ENST00000419629 ARL6IP5O75915 188 aa2.86□□□□□ -1.95
SDCBPP3-201ENST00000419629 GLCEO94923 617 aa2.86□□□□□ -1.95
SDCBPP3-201ENST00000419629 GOSR1O95249 250 aa2.86□□□□□ -1.95
SDCBPP3-201ENST00000419629 CLDN9O95484 217 aa2.86□□□□□ -1.95
SDCBPP3-201ENST00000419629 CSTAP01040 98 aa2.86□□□□□ -1.95
SDCBPP3-201ENST00000419629 GBAP04062 536 aa2.86□□□□□ -1.95
SDCBPP3-201ENST00000419629 RPN2P04844 631 aa2.86□□□□□ -1.95
SDCBPP3-201ENST00000419629 ATP1B1P05026 303 aa2.86□□□□□ -1.95
SDCBPP3-201ENST00000419629 APODP05090 189 aa2.86□□□□□ -1.95
SDCBPP3-201ENST00000419629 BCHEP06276 602 aa2.86□□□□□ -1.95
SDCBPP3-201ENST00000419629 ADRA2AP08913 450 aa2.86□□□□□ -1.95
SDCBPP3-201ENST00000419629 CST2P09228 141 aa2.86□□□□□ -1.95
SDCBPP3-201ENST00000419629 RAB40ALP0C0E4 278 aa2.86□□□□□ -1.95
SDCBPP3-201ENST00000419629 FABP4P15090 132 aa2.86□□□□□ -1.95
SDCBPP3-201ENST00000419629 FOSL2P15408 326 aa2.86□□□□□ -1.95
SDCBPP3-201ENST00000419629 GOT1P17174 413 aa2.86□□□□□ -1.95
SDCBPP3-201ENST00000419629 GSTM3P21266 225 aa2.86□□□□□ -1.95
SDCBPP3-201ENST00000419629 HSD11B1P28845 292 aa2.86□□□□□ -1.95
SDCBPP3-201ENST00000419629 SHC1P29353 583 aa2.86□□□□□ -1.95
SDCBPP3-201ENST00000419629 IFNGR2P38484 337 aa2.86□□□□□ -1.95
SDCBPP3-201ENST00000419629 XCR1P46094 333 aa2.86□□□□□ -1.95
SDCBPP3-201ENST00000419629 RABIFP47224 123 aa2.86□□□□□ -1.95
SDCBPP3-201ENST00000419629 SLC6A12P48065 614 aa2.86□□□□□ -1.95
SDCBPP3-201ENST00000419629 ASCL1P50553 236 aa2.86□□□□□ -1.95
SDCBPP3-201ENST00000419629 TNFSF10P50591 281 aa2.86□□□□□ -1.95
SDCBPP3-201ENST00000419629 AKR1C2P52895 323 aa2.86□□□□□ -1.95
SDCBPP3-201ENST00000419629 H2BFSP57053 126 aa2.86□□□□□ -1.95
SDCBPP3-201ENST00000419629 RPS14P62263 151 aaKnown RBP2.86□□□□□ -1.95
SDCBPP3-201ENST00000419629 RPL38P63173 70 aaKnown RBP2.86□□□□□ -1.95
SDCBPP3-201ENST00000419629 SELENOWP63302 87 aa2.86□□□□□ -1.95
SDCBPP3-201ENST00000419629 ARF5P84085 180 aa2.86□□□□□ -1.95
SDCBPP3-201ENST00000419629 RPL19P84098 196 aaKnown RBP2.86□□□□□ -1.95
SDCBPP3-201ENST00000419629 AKR1C1Q04828 323 aa2.86□□□□□ -1.95
SDCBPP3-201ENST00000419629 SSBP1Q04837 148 aaKnown RBP2.86□□□□□ -1.95
SDCBPP3-201ENST00000419629 BCL2L1Q07817 233 aa2.86□□□□□ -1.95
SDCBPP3-201ENST00000419629 IL11RAQ14626 422 aa2.86□□□□□ -1.95
SDCBPP3-201ENST00000419629 CLINT1Q14677 625 aa2.86□□□□□ -1.95
SDCBPP3-201ENST00000419629 RAB35Q15286 201 aa2.86□□□□□ -1.95
SDCBPP3-201ENST00000419629 FAM189A2Q15884 450 aa2.86□□□□□ -1.95
SDCBPP3-201ENST00000419629 SYPL1Q16563 259 aa2.86□□□□□ -1.95
SDCBPP3-201ENST00000419629 SLC5A12Q1EHB4 618 aa2.86□□□□□ -1.95
SDCBPP3-201ENST00000419629 TMEM241Q24JQ0 296 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms