RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 OR13C8Q8NGS7 320 aa13.57□□□□□ -0.24
CCDC40-202ENST00000374876 SFXN2Q96NB2 322 aa13.57□□□□□ -0.24
CCDC40-202ENST00000374876 RBM24Q9BX46 236 aaKnown RBP13.57□□□□□ -0.24
CCDC40-202ENST00000374876 FXYD6Q9H0Q3 95 aa13.57□□□□□ -0.24
CCDC40-202ENST00000374876 ZNF703Q9H7S9 590 aaPredicted RBP13.57□□□□□ -0.24
CCDC40-202ENST00000374876 SLC2A8Q9NY64 477 aa13.57□□□□□ -0.24
CCDC40-202ENST00000374876 LIPGQ9Y5X9 500 aa13.57□□□□□ -0.24
CCDC40-202ENST00000374876 F5H5K5 113 aa13.57□□□□□ -0.24
CCDC40-202ENST00000374876 MPIG6BO95866 241 aa13.57□□□□□ -0.24
CCDC40-202ENST00000374876 EDN3P14138 238 aa13.57□□□□□ -0.24
CCDC40-202ENST00000374876 OR3A4PP47883 348 aa13.57□□□□□ -0.24
CCDC40-202ENST00000374876 UQCRFS1P47985 274 aa13.57□□□□□ -0.24
CCDC40-202ENST00000374876 SLC6A9P48067 706 aa13.57□□□□□ -0.24
CCDC40-202ENST00000374876 OR52W1Q6IF63 320 aa13.57□□□□□ -0.24
CCDC40-202ENST00000374876 GFRALQ6UXV0 394 aa13.57□□□□□ -0.24
CCDC40-202ENST00000374876 TMEM123Q8N131 208 aa13.57□□□□□ -0.24
CCDC40-202ENST00000374876 LRRC18Q8N456 261 aa13.57□□□□□ -0.24
CCDC40-202ENST00000374876 KCNG3Q8TAE7 436 aa13.57□□□□□ -0.24
CCDC40-202ENST00000374876 ZDHHC11Q9H8X9 412 aa13.57□□□□□ -0.24
CCDC40-202ENST00000374876 A0A0J9YW62 118 aa13.56□□□□□ -0.24
CCDC40-202ENST00000374876 OR14I1A6ND48 311 aa13.56□□□□□ -0.24
CCDC40-202ENST00000374876 DHHO43323 396 aa13.56□□□□□ -0.24
CCDC40-202ENST00000374876 GNLYP22749 145 aa13.56□□□□□ -0.24
CCDC40-202ENST00000374876 ZNF133P52736 654 aaPredicted RBP13.56□□□□□ -0.24
CCDC40-202ENST00000374876 P2RX3P56373 397 aa13.56□□□□□ -0.24
CCDC40-202ENST00000374876 ENDOGQ14249 297 aaKnown RBP13.56□□□□□ -0.24
CCDC40-202ENST00000374876 ZMYND11Q15326 602 aa13.56□□□□□ -0.24
CCDC40-202ENST00000374876 SLC22A6Q4U2R8 563 aa13.56□□□□□ -0.24
CCDC40-202ENST00000374876 CLVS2Q5SYC1 327 aa13.56□□□□□ -0.24
CCDC40-202ENST00000374876 C3P1Q6ZMU1 363 aa13.56□□□□□ -0.24
CCDC40-202ENST00000374876 OR14K1Q8NGZ2 314 aa13.56□□□□□ -0.24
CCDC40-202ENST00000374876 NICN1Q9BSH3 213 aa13.56□□□□□ -0.24
CCDC40-202ENST00000374876 ULBP2Q9BZM5 246 aa13.56□□□□□ -0.24
CCDC40-202ENST00000374876 LPAR5Q9H1C0 372 aa13.56□□□□□ -0.24
CCDC40-202ENST00000374876 B4GALT7Q9UBV7 327 aa13.56□□□□□ -0.24
CCDC40-202ENST00000374876 DNAJC13O75165 2243 aa13.56□□□□□ -0.24
CCDC40-202ENST00000374876 LOC100509620A0A075B734 347 aa13.56□□□□□ -0.24
CCDC40-202ENST00000374876 RPS10-NUDT3A0A1W2PQS6 291 aa13.56□□□□□ -0.24
CCDC40-202ENST00000374876 CDC14BO60729 498 aa13.56□□□□□ -0.24
CCDC40-202ENST00000374876 MPZP25189 248 aa13.56□□□□□ -0.24
CCDC40-202ENST00000374876 S100A11P31949 105 aa13.56□□□□□ -0.24
CCDC40-202ENST00000374876 HRH1P35367 487 aa13.56□□□□□ -0.24
CCDC40-202ENST00000374876 ZNF84P51523 738 aa13.56□□□□□ -0.24
CCDC40-202ENST00000374876 DHRS2Q13268 280 aa13.56□□□□□ -0.24
CCDC40-202ENST00000374876 FAM189A2Q15884 450 aa13.56□□□□□ -0.24
CCDC40-202ENST00000374876 EIF2S3LQ2VIR3 472 aaKnown RBP13.56□□□□□ -0.24
CCDC40-202ENST00000374876 KRTCAP3Q53RY4 240 aa13.56□□□□□ -0.24
CCDC40-202ENST00000374876 C17orf107Q6ZR85 190 aa13.56□□□□□ -0.24
CCDC40-202ENST00000374876 FOXL2NBQ6ZUU3 175 aa13.56□□□□□ -0.24
CCDC40-202ENST00000374876 YRDCQ86U90 279 aaKnown RBP13.56□□□□□ -0.24
CCDC40-202ENST00000374876 ST6GALNAC3Q8NDV1 305 aa13.56□□□□□ -0.24
CCDC40-202ENST00000374876 TMEM104Q8NE00 496 aa13.56□□□□□ -0.24
CCDC40-202ENST00000374876 STEAP2Q8NFT2 490 aa13.56□□□□□ -0.24
CCDC40-202ENST00000374876 PCNPQ8WW12 178 aaKnown RBP13.56□□□□□ -0.24
CCDC40-202ENST00000374876 NABP1Q96AH0 204 aa13.56□□□□□ -0.24
CCDC40-202ENST00000374876 INTS12Q96CB8 462 aaKnown RBP13.56□□□□□ -0.24
CCDC40-202ENST00000374876 RAB3CQ96E17 227 aa13.56□□□□□ -0.24
CCDC40-202ENST00000374876 TMEM59Q9BXS4 323 aa13.56□□□□□ -0.24
CCDC40-202ENST00000374876 GSX2Q9BZM3 304 aa13.56□□□□□ -0.24
CCDC40-202ENST00000374876 LDAHQ9H6V9 325 aa13.56□□□□□ -0.24
CCDC40-202ENST00000374876 KCNN3Q9UGI6 736 aa13.56□□□□□ -0.24
CCDC40-202ENST00000374876 KCNK7Q9Y2U2 307 aa13.56□□□□□ -0.24
CCDC40-202ENST00000374876 AUP1Q9Y679 476 aa13.56□□□□□ -0.24
CCDC40-202ENST00000374876 OR6C65A6NJZ3 312 aa13.55□□□□□ -0.24
CCDC40-202ENST00000374876 HLA-AP01891 365 aaKnown RBP13.55□□□□□ -0.24
CCDC40-202ENST00000374876 IFNA6P05013 189 aa13.55□□□□□ -0.24
CCDC40-202ENST00000374876 UBBP0CG47 229 aa13.55□□□□□ -0.24
CCDC40-202ENST00000374876 TBPP20226 339 aa13.55□□□□□ -0.24
CCDC40-202ENST00000374876 WIPI1Q5MNZ9 446 aaPredicted RBP13.55□□□□□ -0.24
CCDC40-202ENST00000374876 TMUB2Q71RG4 321 aa13.55□□□□□ -0.24
CCDC40-202ENST00000374876 NAA40Q86UY6 237 aa13.55□□□□□ -0.24
CCDC40-202ENST00000374876 PNLDC1Q8NA58 520 aaKnown RBP13.55□□□□□ -0.24
CCDC40-202ENST00000374876 GALNT11Q8NCW6 608 aa13.55□□□□□ -0.24
CCDC40-202ENST00000374876 OR14L1PQ8NHC6 308 aa13.55□□□□□ -0.24
CCDC40-202ENST00000374876 SRXN1Q9BYN0 137 aa13.55□□□□□ -0.24
CCDC40-202ENST00000374876 SLC6A15Q9H2J7 730 aa13.55□□□□□ -0.24
CCDC40-202ENST00000374876 BANF2Q9H503 90 aa13.55□□□□□ -0.24
CCDC40-202ENST00000374876 VSIG4Q9Y279 399 aa13.55□□□□□ -0.24
CCDC40-202ENST00000374876 E9PLN8 166 aa13.54□□□□□ -0.24
CCDC40-202ENST00000374876 SSX5O60225 188 aa13.54□□□□□ -0.24
CCDC40-202ENST00000374876 RP2O75695 350 aa13.54□□□□□ -0.24
CCDC40-202ENST00000374876 CRTAPO75718 401 aaPredicted RBP13.54□□□□□ -0.24
CCDC40-202ENST00000374876 GSTP1P09211 210 aaKnown RBP13.54□□□□□ -0.24
CCDC40-202ENST00000374876 CD34P28906 385 aa13.54□□□□□ -0.24
CCDC40-202ENST00000374876 SRD5A2P31213 254 aa13.54□□□□□ -0.24
CCDC40-202ENST00000374876 SORDQ00796 357 aa13.54□□□□□ -0.24
CCDC40-202ENST00000374876 ECH1Q13011 328 aa13.54□□□□□ -0.24
CCDC40-202ENST00000374876 ZIC4Q8N9L1 334 aa13.54□□□□□ -0.24
CCDC40-202ENST00000374876 C1orf147Q96MC9 270 aaPredicted RBP13.54□□□□□ -0.24
CCDC40-202ENST00000374876 FOXD3Q9UJU5 478 aaPredicted RBP13.54□□□□□ -0.24
CCDC40-202ENST00000374876 NOP16Q9Y3C1 178 aaKnown RBP13.54□□□□□ -0.24
CCDC40-202ENST00000374876 GTF3C1Q12789 2109 aa13.54□□□□□ -0.24
CCDC40-202ENST00000374876 A0A0A6YYD4 124 aa13.54□□□□□ -0.24
CCDC40-202ENST00000374876 IGKV1-9A0A0C4DH69 117 aa13.54□□□□□ -0.24
CCDC40-202ENST00000374876 A0A0U1RQV5 110 aa13.54□□□□□ -0.24
CCDC40-202ENST00000374876 C5orf63A6NC05 138 aa13.54□□□□□ -0.24
CCDC40-202ENST00000374876 DNPH1O43598 174 aa13.54□□□□□ -0.24
CCDC40-202ENST00000374876 APOC1P02654 83 aa13.54□□□□□ -0.24
CCDC40-202ENST00000374876 SUCLG1P53597 346 aaKnown RBP13.54□□□□□ -0.24
CCDC40-202ENST00000374876 RAC3P60763 192 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms