RNA–Protein interactions for RNA: ENST00000357179.9

TOP3B-201, Transcript of DNA topoisomerase III beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3B, Length 2,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-201ENST00000357179 DEFB110Q30KQ9 67 aa12.97□□□□□ -0.33
TOP3B-201ENST00000357179 COL13A1Q5TAT6 717 aaPredicted RBP12.97□□□□□ -0.33
TOP3B-201ENST00000357179 KCTD18Q6PI47 426 aaPredicted RBP12.97□□□□□ -0.33
TOP3B-201ENST00000357179 SLC22A25Q6T423 547 aa12.97□□□□□ -0.33
TOP3B-201ENST00000357179 FRZBQ92765 325 aa12.97□□□□□ -0.33
TOP3B-201ENST00000357179 DDA1Q9BW61 102 aa12.97□□□□□ -0.33
TOP3B-201ENST00000357179 TCEAL2Q9H3H9 227 aaPredicted RBP12.97□□□□□ -0.33
TOP3B-201ENST00000357179 UNKLQ9H9P5 680 aaKnown RBP12.97□□□□□ -0.33
TOP3B-201ENST00000357179 MARCH11A6NNE9 402 aa12.97□□□□□ -0.33
TOP3B-201ENST00000357179 PRH1P02810 166 aa12.97□□□□□ -0.33
TOP3B-201ENST00000357179 GZMBP10144 247 aa12.97□□□□□ -0.33
TOP3B-201ENST00000357179 G0S2P27469 103 aa12.97□□□□□ -0.33
TOP3B-201ENST00000357179 PPP1CCP36873 323 aaKnown RBP12.97□□□□□ -0.33
TOP3B-201ENST00000357179 LHFPL1Q86WI0 220 aa12.97□□□□□ -0.33
TOP3B-201ENST00000357179 RARRES2Q99969 163 aa12.97□□□□□ -0.33
TOP3B-201ENST00000357179 ATG101Q9BSB4 218 aa12.97□□□□□ -0.33
TOP3B-201ENST00000357179 PLEKHA2Q9HB19 425 aa12.97□□□□□ -0.33
TOP3B-201ENST00000357179 NSA2O95478 260 aaKnown RBP12.96□□□□□ -0.33
TOP3B-201ENST00000357179 TNFP01375 233 aa12.96□□□□□ -0.33
TOP3B-201ENST00000357179 MBP02144 154 aa12.96□□□□□ -0.33
TOP3B-201ENST00000357179 VSIG8P0DPA2 414 aa12.96□□□□□ -0.33
TOP3B-201ENST00000357179 NR2C1P13056 603 aa12.96□□□□□ -0.33
TOP3B-201ENST00000357179 UBE2KP61086 200 aa12.96□□□□□ -0.33
TOP3B-201ENST00000357179 PCK2Q16822 640 aa12.96□□□□□ -0.33
TOP3B-201ENST00000357179 PTCRAQ6ISU1 281 aaPredicted RBP12.96□□□□□ -0.33
TOP3B-201ENST00000357179 ARMC6Q6NXE6 501 aa12.96□□□□□ -0.33
TOP3B-201ENST00000357179 SNIP1Q8TAD8 396 aaKnown RBP12.96□□□□□ -0.33
TOP3B-201ENST00000357179 RNASEH2CQ8TDP1 164 aaKnown RBP12.96□□□□□ -0.33
TOP3B-201ENST00000357179 SLC37A2Q8TED4 501 aa12.96□□□□□ -0.33
TOP3B-201ENST00000357179 TUBD1Q9UJT1 453 aa12.96□□□□□ -0.33
TOP3B-201ENST00000357179 BORCS7-ASMTA0A0B4J1R7 106 aa12.96□□□□□ -0.34
TOP3B-201ENST00000357179 TMEM269A0A1B0GVZ9 245 aa12.96□□□□□ -0.34
TOP3B-201ENST00000357179 CYTIPO60759 359 aa12.96□□□□□ -0.34
TOP3B-201ENST00000357179 BPNT1O95861 308 aa12.96□□□□□ -0.34
TOP3B-201ENST00000357179 P2RY1P47900 373 aa12.96□□□□□ -0.34
TOP3B-201ENST00000357179 C8orf44Q96CB5 159 aa12.96□□□□□ -0.34
TOP3B-201ENST00000357179 C5orf34Q96MH7 638 aa12.96□□□□□ -0.34
TOP3B-201ENST00000357179 VSX1Q9NZR4 365 aaPredicted RBP12.96□□□□□ -0.34
TOP3B-201ENST00000357179 TCFL5Q9UL49 500 aa12.96□□□□□ -0.34
TOP3B-201ENST00000357179 LRP4O75096 1905 aa12.96□□□□□ -0.34
TOP3B-201ENST00000357179 TRAV36DV7A0A075B6V5 113 aa12.95□□□□□ -0.34
TOP3B-201ENST00000357179 PRSS37A4D1T9 235 aa12.95□□□□□ -0.34
TOP3B-201ENST00000357179 HSD17B6O14756 317 aa12.95□□□□□ -0.34
TOP3B-201ENST00000357179 UTS2O95399 124 aa12.95□□□□□ -0.34
TOP3B-201ENST00000357179 AKT2P31751 481 aa12.95□□□□□ -0.34
TOP3B-201ENST00000357179 PCP4P48539 62 aa12.95□□□□□ -0.34
TOP3B-201ENST00000357179 AADACL3Q5VUY0 350 aa12.95□□□□□ -0.34
TOP3B-201ENST00000357179 TMEM156Q8N614 296 aa12.95□□□□□ -0.34
TOP3B-201ENST00000357179 OR14K1Q8NGZ2 314 aa12.95□□□□□ -0.34
TOP3B-201ENST00000357179 ZNF519Q8TB69 540 aa12.95□□□□□ -0.34
TOP3B-201ENST00000357179 RHBDD1Q8TEB9 315 aa12.95□□□□□ -0.34
TOP3B-201ENST00000357179 BSCL2Q96G97 398 aaPredicted RBP12.95□□□□□ -0.34
TOP3B-201ENST00000357179 ACTR3CQ9C0K3 210 aaPredicted RBP12.95□□□□□ -0.34
TOP3B-201ENST00000357179 WFDC1Q9HC57 220 aa12.95□□□□□ -0.34
TOP3B-201ENST00000357179 A0A087WZY1 265 aa12.95□□□□□ -0.34
TOP3B-201ENST00000357179 LOC107986453A0A1B0GWG9 222 aa12.95□□□□□ -0.34
TOP3B-201ENST00000357179 MT-ATP6P00846 226 aa12.95□□□□□ -0.34
TOP3B-201ENST00000357179 HLA-DQA2P01906 255 aa12.95□□□□□ -0.34
TOP3B-201ENST00000357179 GLRA1P23415 457 aa12.95□□□□□ -0.34
TOP3B-201ENST00000357179 APOBEC1P41238 236 aaKnown RBP12.95□□□□□ -0.34
TOP3B-201ENST00000357179 GLIPR1P48060 266 aa12.95□□□□□ -0.34
TOP3B-201ENST00000357179 RPL27P61353 136 aaKnown RBP12.95□□□□□ -0.34
TOP3B-201ENST00000357179 DLK1P80370 383 aa12.95□□□□□ -0.34
TOP3B-201ENST00000357179 GPM6BQ13491 265 aa12.95□□□□□ -0.34
TOP3B-201ENST00000357179 METTL21AQ8WXB1 218 aa12.95□□□□□ -0.34
TOP3B-201ENST00000357179 ZNF524Q96C55 264 aa12.95□□□□□ -0.34
TOP3B-201ENST00000357179 R3HDM4Q96D70 268 aa12.95□□□□□ -0.34
TOP3B-201ENST00000357179 RCC1LQ96I51 464 aaKnown RBP12.95□□□□□ -0.34
TOP3B-201ENST00000357179 SUSD2Q9UGT4 822 aa12.95□□□□□ -0.34
TOP3B-201ENST00000357179 OSGIN2Q9Y236 505 aa12.95□□□□□ -0.34
TOP3B-201ENST00000357179 LRP12Q9Y561 859 aa12.95□□□□□ -0.34
TOP3B-201ENST00000357179 IGLV1-36A0A0B4J1U3 117 aa12.95□□□□□ -0.34
TOP3B-201ENST00000357179 LMX1BO60663 402 aa12.95□□□□□ -0.34
TOP3B-201ENST00000357179 OR6A2O95222 327 aa12.95□□□□□ -0.34
TOP3B-201ENST00000357179 IL18BPO95998 194 aa12.95□□□□□ -0.34
TOP3B-201ENST00000357179 SERPINA2P20848 420 aa12.95□□□□□ -0.34
TOP3B-201ENST00000357179 AFF3P51826 1226 aaKnown RBP12.95□□□□□ -0.34
TOP3B-201ENST00000357179 HNF4GQ14541 408 aa12.95□□□□□ -0.34
TOP3B-201ENST00000357179 SLC10A1Q14973 349 aa12.95□□□□□ -0.34
TOP3B-201ENST00000357179 SGCBQ16585 318 aa12.95□□□□□ -0.34
TOP3B-201ENST00000357179 OR13G1Q8NGZ3 307 aa12.95□□□□□ -0.34
TOP3B-201ENST00000357179 BADQ92934 168 aa12.95□□□□□ -0.34
TOP3B-201ENST00000357179 MRPL22Q9NWU5 206 aaKnown RBP12.95□□□□□ -0.34
TOP3B-201ENST00000357179 OR14J1Q9UGF5 321 aa12.95□□□□□ -0.34
TOP3B-201ENST00000357179 HS3ST3A1Q9Y663 406 aa12.95□□□□□ -0.34
TOP3B-201ENST00000357179 MTCH2Q9Y6C9 303 aa12.95□□□□□ -0.34
TOP3B-201ENST00000357179 SRSF10O75494 262 aaKnown RBP12.94□□□□□ -0.34
TOP3B-201ENST00000357179 KLF8O95600 359 aaPredicted RBP12.94□□□□□ -0.34
TOP3B-201ENST00000357179 ISG15P05161 165 aa12.94□□□□□ -0.34
TOP3B-201ENST00000357179 VEGFBP49765 207 aa12.94□□□□□ -0.34
TOP3B-201ENST00000357179 Q6ZSR6 202 aa12.94□□□□□ -0.34
TOP3B-201ENST00000357179 APCDD1LQ8NCL9 501 aa12.94□□□□□ -0.34
TOP3B-201ENST00000357179 SH3BGRL3Q9H299 93 aa12.94□□□□□ -0.34
TOP3B-201ENST00000357179 C1orf123Q9NWV4 160 aa12.94□□□□□ -0.34
TOP3B-201ENST00000357179 K7N7A8 449 aa12.94□□□□□ -0.34
TOP3B-201ENST00000357179 CD200P41217 278 aa12.94□□□□□ -0.34
TOP3B-201ENST00000357179 SQSTM1Q13501 440 aa12.94□□□□□ -0.34
TOP3B-201ENST00000357179 C1QL3Q5VWW1 255 aa12.94□□□□□ -0.34
TOP3B-201ENST00000357179 LANCL3Q6ZV70 420 aa12.94□□□□□ -0.34
TOP3B-201ENST00000357179 SLC46A1Q96NT5 459 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms