RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Phyhd1Q9DB26 291 aa14.08□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Lancl2Q9JJK2 450 aa14.08□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Tp53bp1P70399 1969 aa14.08□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Vmn1r122K7N726 305 aa14.08□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 GamtO35969 236 aa14.08□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 MyogP12979 224 aa14.08□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 PlgP20918 812 aa14.08□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Tgif1P70284 272 aa14.08□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Cuzd1P70412 606 aa14.08□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Eif4e1bQ3UTA9 244 aa14.08□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 BocQ6AZB0 1110 aa14.08□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Zfp157Q6PCM4 567 aa14.08□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Plcxd3Q8BLJ3 321 aa14.08□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Smim37Q8BT35 56 aa14.08□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Lrfn5Q8BXA0 719 aa14.08□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Pias2Q8C5D8 621 aa14.08□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Mmp21Q8K3F2 568 aa14.08□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Vmn1r59Q8R2B9 310 aa14.08□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Olfr361Q8VF16 322 aa14.08□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Olfr1389Q8VGX0 311 aa14.08□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Ackr4Q924I3 350 aa14.08□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Cnih4Q9CX13 139 aa14.08□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Bap18Q9DCT6 171 aa14.08□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 GlsD3Z7P3 674 aa14.08□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Ces2gE9PV38 560 aa14.08□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Psmb1O09061 240 aa14.08□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 FrzbP97401 323 aa14.08□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Prss57Q14B24 284 aa14.08□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 ZpbpQ62522 350 aa14.08□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Hbq1aQ8BYM1 145 aa14.08□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Slc38a2Q8CFE6 504 aa14.08□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Pom121Q8K3Z9 1200 aa14.08□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Olfr1347Q8VF33 319 aa14.08□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Glipr2Q9CYL5 154 aa14.08□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Pdcd1lg2Q9WUL5 247 aa14.08□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Oc90Q9Z0L3 485 aa14.08□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Trbc2A0A075B5J4 173 aa14.07□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Trbc1A0A0A6YWV4 173 aa14.07□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Vmn2r66K7N6R9 851 aa14.07□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 C1rlQ3UZ09 482 aa14.07□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Taar8cQ5QD05 344 aa14.07□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Cxcl3Q6W5C0 100 aa14.07□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Gal3st2Q6XQH0 394 aa14.07□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Ankrd33Q8BXP5 385 aa14.07□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Abhd17aQ99JW1 310 aa14.07□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Myo10F8VQB6 2062 aa14.07□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Malrd1A2AJX4 2123 aa14.07□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Chd3B1AR17 2055 aa14.07□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Vmn1r175K7N6T9 304 aa14.07□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 St8sia2O35696 375 aa14.07□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Mamld1P0C6A2 803 aa14.07□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Nol4lQ6DIB4 494 aa14.07□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Mindy2Q6PDI6 601 aa14.07□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Serinc5Q8BHJ6 461 aa14.07□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Lmf2Q8C3X8 702 aaKnown RBP14.07□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Ddah2Q99LD8 285 aa14.07□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Asah1Q9WV54 394 aa14.07□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Ralgapa2A3KGS3 1872 aa14.07□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Gm35315A0A1B0GRI2 571 aa14.07□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Gm15737D3YZR0 106 aa14.07□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 GzmdP11033 252 aa14.07□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Il7rP16872 459 aa14.07□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Olfr1031Q7TR87 336 aa14.07□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Dusp28Q8BTR5 163 aa14.07□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Srpx2Q8R054 468 aa14.07□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Tmprss11dQ8VHK8 417 aa14.07□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Emc4Q9CZX9 183 aa14.07□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Wnt9bO35468 359 aa14.06□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Selenbp1P17563 472 aa14.06□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Taf9bQ6NZA9 249 aa14.06□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Atg4dQ8BGV9 474 aa14.06□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Muc20Q8BUE7 656 aa14.06□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Znf574Q8BY46 900 aa14.06□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Ssxb2Q8C5Z3 165 aa14.06□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Sla2Q8R4L0 259 aa14.06□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Snx18Q91ZR2 614 aa14.06□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Med29Q9DB91 199 aa14.06□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Rhox3gB9EJQ9 160 aa14.06□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Olfr243E9PV96 316 aa14.06□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Adamts3E9Q287 1204 aa14.06□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Olfr628K7N6B2 316 aa14.06□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Fcer1aP20489 250 aa14.06□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Nxph2Q61199 261 aa14.06□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 F12Q80YC5 597 aa14.06□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Creb5Q8K1L0 357 aa14.06□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Olfr156Q8VGA9 318 aa14.06□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Zcchc10Q9CX48 178 aa14.06□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Eif1bQ9CXU9 113 aa14.06□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Olfr1150-ps1A0A1L1STL1 316 aa14.06□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Slc25a43A2A3V2 341 aa14.06□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Olfr623E9Q382 317 aa14.06□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 ScimpQ3UU41 150 aa14.06□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Olfr446Q8VEV0 308 aa14.06□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Olfr215Q8VF82 310 aa14.06□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Olfr1459Q8VFV9 307 aa14.06□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 B3galnt1Q920V1 331 aa14.06□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Cln8Q9QUK3 288 aa14.06□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Gm21761J3QK00 171 aa14.06□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 Wsb1O54927 421 aa14.06□□□□□ -0.16
Ccdc88b-201ENSMUST00000113440 AmbpQ07456 349 aa14.06□□□□□ -0.16
Retrieved 100 of 22,080 RNA–protein pairs in 102.7 ms