Protein–RNA interactions for Protein: O09061

Psmb1, Proteasome subunit beta type-1, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Psmb1O09061 Gm25239-201ENSMUST00000174915 86 ntBASIC34.41■■■■□ 3.1
Psmb1O09061 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
Psmb1O09061 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Psmb1O09061 Gm15042-201ENSMUST00000120212 883 ntBASIC30.14■■■□□ 2.42
Psmb1O09061 Gm24109-201ENSMUST00000175489 103 ntBASIC29.78■■■□□ 2.36
Psmb1O09061 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
Psmb1O09061 Gm15045-201ENSMUST00000117359 883 ntBASIC29.45■■■□□ 2.31
Psmb1O09061 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
Psmb1O09061 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
Psmb1O09061 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC29.06■■■□□ 2.24
Psmb1O09061 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC28.94■■■□□ 2.22
Psmb1O09061 Gm23366-201ENSMUST00000175022 89 ntBASIC28.79■■■□□ 2.2
Psmb1O09061 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC28.66■■■□□ 2.18
Psmb1O09061 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
Psmb1O09061 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Psmb1O09061 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Psmb1O09061 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC27.89■■■□□ 2.05
Psmb1O09061 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC27.85■■■□□ 2.05
Psmb1O09061 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC27.82■■■□□ 2.04
Psmb1O09061 AC153911.1-202ENSMUST00000218534 1034 ntBASIC27.72■■■□□ 2.03
Psmb1O09061 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Psmb1O09061 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Psmb1O09061 Psd-208ENSMUST00000224556 2034 ntBASIC27.6■■■□□ 2.01
Psmb1O09061 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC27.55■■■□□ 2
Psmb1O09061 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Psmb1O09061 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Psmb1O09061 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC27.46■■□□□ 1.99
Psmb1O09061 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC27.43■■□□□ 1.98
Psmb1O09061 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC27.42■■□□□ 1.98
Psmb1O09061 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC27.34■■□□□ 1.97
Psmb1O09061 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Psmb1O09061 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
Psmb1O09061 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Psmb1O09061 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
Psmb1O09061 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Psmb1O09061 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC27.19■■□□□ 1.94
Psmb1O09061 Gm25238-201ENSMUST00000174914 89 ntBASIC27.12■■□□□ 1.93
Psmb1O09061 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC27.09■■□□□ 1.93
Psmb1O09061 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Psmb1O09061 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC26.85■■□□□ 1.89
Psmb1O09061 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC26.7■■□□□ 1.86
Psmb1O09061 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Psmb1O09061 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Psmb1O09061 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC26.55■■□□□ 1.84
Psmb1O09061 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
Psmb1O09061 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Psmb1O09061 Gm27325-201ENSMUST00000175467 74 ntBASIC26.43■■□□□ 1.82
Psmb1O09061 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Psmb1O09061 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC26.41■■□□□ 1.82
Psmb1O09061 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC26.39■■□□□ 1.82
Psmb1O09061 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Psmb1O09061 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC26.35■■□□□ 1.81
Psmb1O09061 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Psmb1O09061 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC26.23■■□□□ 1.79
Psmb1O09061 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
Psmb1O09061 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC26.07■■□□□ 1.76
Psmb1O09061 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC26.07■■□□□ 1.76
Psmb1O09061 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC26.05■■□□□ 1.76
Psmb1O09061 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Psmb1O09061 Gm25262-201ENSMUST00000174934 133 ntBASIC26.02■■□□□ 1.76
Psmb1O09061 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Psmb1O09061 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Psmb1O09061 Rab21-202ENSMUST00000218831 843 ntBASIC25.94■■□□□ 1.74
Psmb1O09061 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Psmb1O09061 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Psmb1O09061 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC25.85■■□□□ 1.73
Psmb1O09061 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Psmb1O09061 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Psmb1O09061 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC25.82■■□□□ 1.72
Psmb1O09061 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
Psmb1O09061 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
Psmb1O09061 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
Psmb1O09061 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
Psmb1O09061 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Psmb1O09061 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Psmb1O09061 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
Psmb1O09061 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC25.66■■□□□ 1.7
Psmb1O09061 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC25.65■■□□□ 1.7
Psmb1O09061 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Psmb1O09061 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
Psmb1O09061 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
Psmb1O09061 Gm10524-201ENSMUST00000181931 1893 ntBASIC25.59■■□□□ 1.69
Psmb1O09061 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
Psmb1O09061 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
Psmb1O09061 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
Psmb1O09061 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
Psmb1O09061 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC25.49■■□□□ 1.67
Psmb1O09061 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC25.47■■□□□ 1.67
Psmb1O09061 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.66
Psmb1O09061 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Psmb1O09061 Gm26115-201ENSMUST00000175605 87 ntBASIC25.34■■□□□ 1.65
Psmb1O09061 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC25.34■■□□□ 1.65
Psmb1O09061 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Psmb1O09061 CT025624.2-201ENSMUST00000223609 1909 ntBASIC25.33■■□□□ 1.65
Psmb1O09061 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Psmb1O09061 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
Psmb1O09061 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
Psmb1O09061 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
Psmb1O09061 Gm42596-201ENSMUST00000196305 1958 ntBASIC25.25■■□□□ 1.63
Psmb1O09061 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms