RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 MAP2K3P46734 347 aa15.39■□□□□ 0.05
SHKBP1-202ENST00000593764 CDC42P60953 191 aa15.39■□□□□ 0.05
SHKBP1-202ENST00000593764 POU4F2Q12837 409 aa15.39■□□□□ 0.05
SHKBP1-202ENST00000593764 KCNJ8Q15842 424 aa15.39■□□□□ 0.05
SHKBP1-202ENST00000593764 ZIK1Q3SY52 487 aaPredicted RBP15.39■□□□□ 0.05
SHKBP1-202ENST00000593764 KLF17Q5JT82 389 aaPredicted RBP15.39■□□□□ 0.05
SHKBP1-202ENST00000593764 ZNF684Q5T5D7 378 aa15.39■□□□□ 0.05
SHKBP1-202ENST00000593764 TEX36Q5VZQ5 186 aa15.39■□□□□ 0.05
SHKBP1-202ENST00000593764 PLEKHG7Q6ZR37 379 aa15.39■□□□□ 0.05
SHKBP1-202ENST00000593764 FAM81AQ8TBF8 368 aa15.39■□□□□ 0.05
SHKBP1-202ENST00000593764 LRRC29Q8WV35 223 aa15.39■□□□□ 0.05
SHKBP1-202ENST00000593764 TRUB1Q8WWH5 349 aaKnown RBP15.39■□□□□ 0.05
SHKBP1-202ENST00000593764 RAB40AQ8WXH6 277 aa15.39■□□□□ 0.05
SHKBP1-202ENST00000593764 ITFG2Q969R8 447 aa15.39■□□□□ 0.05
SHKBP1-202ENST00000593764 TBX5Q99593 518 aa15.39■□□□□ 0.05
SHKBP1-202ENST00000593764 ABCB9Q9NP78 766 aa15.39■□□□□ 0.05
SHKBP1-202ENST00000593764 CLN8Q9UBY8 286 aa15.39■□□□□ 0.05
SHKBP1-202ENST00000593764 R4GMQ9 66 aa15.39■□□□□ 0.05
SHKBP1-202ENST00000593764 A0A0A6YYJ9 748 aa15.38■□□□□ 0.05
SHKBP1-202ENST00000593764 ZNF816-ZNF321PA0A0X1KG74 233 aa15.38■□□□□ 0.05
SHKBP1-202ENST00000593764 KIR2DS1A0A191URI9 304 aa15.38■□□□□ 0.05
SHKBP1-202ENST00000593764 NDUFA2O43678 99 aa15.38■□□□□ 0.05
SHKBP1-202ENST00000593764 FCN3O75636 299 aa15.38■□□□□ 0.05
SHKBP1-202ENST00000593764 GYPAP02724 150 aa15.38■□□□□ 0.05
SHKBP1-202ENST00000593764 OR2T7P0C7T2 308 aa15.38■□□□□ 0.05
SHKBP1-202ENST00000593764 ATP6V1B1P15313 513 aa15.38■□□□□ 0.05
SHKBP1-202ENST00000593764 SCGB2A2Q13296 93 aa15.38■□□□□ 0.05
SHKBP1-202ENST00000593764 TMED1Q13445 227 aa15.38■□□□□ 0.05
SHKBP1-202ENST00000593764 ELMOD2Q8IZ81 293 aa15.38■□□□□ 0.05
SHKBP1-202ENST00000593764 SEMA6DQ8NFY4 1073 aa15.38■□□□□ 0.05
SHKBP1-202ENST00000593764 OR2T27Q8NH04 317 aa15.38■□□□□ 0.05
SHKBP1-202ENST00000593764 SEH1LQ96EE3 360 aa15.38■□□□□ 0.05
SHKBP1-202ENST00000593764 RNF170Q96K19 258 aa15.38■□□□□ 0.05
SHKBP1-202ENST00000593764 FAM71F1Q96KD3 344 aaPredicted RBP15.38■□□□□ 0.05
SHKBP1-202ENST00000593764 MBOAT4Q96T53 435 aa15.38■□□□□ 0.05
SHKBP1-202ENST00000593764 SLC29A1Q99808 456 aa15.38■□□□□ 0.05
SHKBP1-202ENST00000593764 C19orf24Q9BVV8 132 aa15.38■□□□□ 0.05
SHKBP1-202ENST00000593764 RTL8AQ9BWD3 113 aa15.38■□□□□ 0.05
SHKBP1-202ENST00000593764 TRIM36Q9NQ86 728 aa15.38■□□□□ 0.05
SHKBP1-202ENST00000593764 ORC6Q9Y5N6 252 aa15.38■□□□□ 0.05
SHKBP1-202ENST00000593764 IGHV3OR15-7A0A075B7D8 119 aa15.37■□□□□ 0.05
SHKBP1-202ENST00000593764 A0A1B0GTI1 187 aa15.37■□□□□ 0.05
SHKBP1-202ENST00000593764 TMEM210A6NLX4 147 aa15.37■□□□□ 0.05
SHKBP1-202ENST00000593764 C22orf46C9J442 243 aa15.37■□□□□ 0.05
SHKBP1-202ENST00000593764 LOC110117498-PIK3R3F6TDL0 507 aa15.37■□□□□ 0.05
SHKBP1-202ENST00000593764 ADAM20O43506 726 aa15.37■□□□□ 0.05
SHKBP1-202ENST00000593764 RGS9O75916 674 aaPredicted RBP15.37■□□□□ 0.05
SHKBP1-202ENST00000593764 SNRPGP62308 76 aaKnown RBP15.37■□□□□ 0.05
SHKBP1-202ENST00000593764 TUSC1Q2TAM9 212 aa15.37■□□□□ 0.05
SHKBP1-202ENST00000593764 SLC25A30Q5SVS4 291 aa15.37■□□□□ 0.05
SHKBP1-202ENST00000593764 USP43Q70EL4 1123 aa15.37■□□□□ 0.05
SHKBP1-202ENST00000593764 ZDHHC23Q8IYP9 409 aa15.37■□□□□ 0.05
SHKBP1-202ENST00000593764 PQLC1Q8N2U9 271 aa15.37■□□□□ 0.05
SHKBP1-202ENST00000593764 SCCPDHQ8NBX0 429 aa15.37■□□□□ 0.05
SHKBP1-202ENST00000593764 RPL3LQ92901 407 aaKnown RBP15.37■□□□□ 0.05
SHKBP1-202ENST00000593764 RFKQ969G6 155 aa15.37■□□□□ 0.05
SHKBP1-202ENST00000593764 RAB3IPQ96QF0 476 aaPredicted RBP15.37■□□□□ 0.05
SHKBP1-202ENST00000593764 MRI1Q9BV20 369 aa15.37■□□□□ 0.05
SHKBP1-202ENST00000593764 RASSF4Q9H2L5 321 aa15.37■□□□□ 0.05
SHKBP1-202ENST00000593764 SMURF1Q9HCE7 757 aa15.37■□□□□ 0.05
SHKBP1-202ENST00000593764 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.37■□□□□ 0.05
SHKBP1-202ENST00000593764 OR52A1Q9UKL2 312 aa15.37■□□□□ 0.05
SHKBP1-202ENST00000593764 SRRM5B3KS81 715 aa15.36■□□□□ 0.05
SHKBP1-202ENST00000593764 ENTPD6O75354 484 aa15.36■□□□□ 0.05
SHKBP1-202ENST00000593764 DHRS3O75911 302 aa15.36■□□□□ 0.05
SHKBP1-202ENST00000593764 NPY4RP50391 375 aa15.36■□□□□ 0.05
SHKBP1-202ENST00000593764 ELF3P78545 371 aaPredicted RBP15.36■□□□□ 0.05
SHKBP1-202ENST00000593764 RIPPLY1Q0D2K3 151 aa15.36■□□□□ 0.05
SHKBP1-202ENST00000593764 DMRTC1Q5HYR2 192 aa15.36■□□□□ 0.05
SHKBP1-202ENST00000593764 CEP78Q5JTW2 689 aa15.36■□□□□ 0.05
SHKBP1-202ENST00000593764 BTNL3Q6UXE8 466 aa15.36■□□□□ 0.05
SHKBP1-202ENST00000593764 Q6ZSR3 168 aa15.36■□□□□ 0.05
SHKBP1-202ENST00000593764 COMMD2Q86X83 199 aa15.36■□□□□ 0.05
SHKBP1-202ENST00000593764 OR10H4Q8NGA5 316 aa15.36■□□□□ 0.05
SHKBP1-202ENST00000593764 ZNF418Q8TF45 676 aaPredicted RBP15.36■□□□□ 0.05
SHKBP1-202ENST00000593764 SLC6A7Q99884 636 aa15.36■□□□□ 0.05
SHKBP1-202ENST00000593764 NUDT16L1Q9BRJ7 211 aaKnown RBP15.36■□□□□ 0.05
SHKBP1-202ENST00000593764 MOB1AQ9H8S9 216 aa15.36■□□□□ 0.05
SHKBP1-202ENST00000593764 IMPAD1Q9NX62 359 aa15.36■□□□□ 0.05
SHKBP1-202ENST00000593764 ERVK-18Q9QC07 812 aa15.36■□□□□ 0.05
SHKBP1-202ENST00000593764 KAAG1Q9UBP8 84 aa15.36■□□□□ 0.05
SHKBP1-202ENST00000593764 SLC22A13Q9Y226 551 aa15.36■□□□□ 0.05
SHKBP1-202ENST00000593764 PIGLQ9Y2B2 252 aa15.36■□□□□ 0.05
SHKBP1-202ENST00000593764 SNX5Q9Y5X3 404 aa15.36■□□□□ 0.05
SHKBP1-202ENST00000593764 SULT1C4O75897 302 aa15.35■□□□□ 0.05
SHKBP1-202ENST00000593764 KRT8P05787 483 aa15.35■□□□□ 0.05
SHKBP1-202ENST00000593764 PPIAL4GP0DN37 164 aa15.35■□□□□ 0.05
SHKBP1-202ENST00000593764 MUC1P15941 1255 aaPredicted RBP15.35■□□□□ 0.05
SHKBP1-202ENST00000593764 FAHP16930 419 aa15.35■□□□□ 0.05
SHKBP1-202ENST00000593764 GPM6AP51674 278 aa15.35■□□□□ 0.05
SHKBP1-202ENST00000593764 ZNF85Q03923 595 aa15.35■□□□□ 0.05
SHKBP1-202ENST00000593764 OCLNQ16625 522 aa15.35■□□□□ 0.05
SHKBP1-202ENST00000593764 MICBQ29980 383 aa15.35■□□□□ 0.05
SHKBP1-202ENST00000593764 CEACAM21Q3KPI0 293 aa15.35■□□□□ 0.05
SHKBP1-202ENST00000593764 ARMCX4Q5H9R4 360 aa15.35■□□□□ 0.05
SHKBP1-202ENST00000593764 BCL2L15Q5TBC7 163 aa15.35■□□□□ 0.05
SHKBP1-202ENST00000593764 ZBTB37Q5TC79 503 aa15.35■□□□□ 0.05
SHKBP1-202ENST00000593764 KCTD8Q6ZWB6 473 aa15.35■□□□□ 0.05
SHKBP1-202ENST00000593764 YIPF7Q8N8F6 280 aa15.35■□□□□ 0.05
SHKBP1-202ENST00000593764 OR10Z1Q8NGY1 313 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms