RNA–Protein interactions for RNA: ENST00000565815.1

LINC00561-201, long intergenic non-protein coding RNA 561, humanhuman

BASIC

Gene LINC00561, Length 2,738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00561-201ENST00000565815 DAPL1A0PJW8 107 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 TRAPPC13A5PLN9 417 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 HMSDA8MTL9 139 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 SNURFLB1AK76 121 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 ZNF879B4DU55 563 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 M0R233 179 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 GPR171O14626 319 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 B3GALNT1O75752 331 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 F3P13726 295 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 RAB3BP20337 219 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 BTCP35070 178 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 FAUP35544 74 aaKnown RBP3.57□□□□□ -1.84
LINC00561-201ENST00000565815 ACTR1BP42025 376 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 RBM34P42696 430 aaKnown RBP3.57□□□□□ -1.84
LINC00561-201ENST00000565815 NCBP2P52298 156 aaKnown RBP eCLIP3.57□□□□□ -1.84
LINC00561-201ENST00000565815 CTBP2P56545 445 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 ACTR1AP61163 376 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 GGTLC2Q14390 218 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 SYPL1Q16563 259 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 CCSMST1Q4G0I0 132 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 BCL2L15Q5TBC7 163 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 RFLNAQ6ZTI6 216 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 OR4M2Q8NGB6 313 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 OR5T2Q8NGG2 359 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 OR8D4Q8NGM9 314 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 OR5W2Q8NH69 310 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 TRMT10AQ8TBZ6 339 aaKnown RBP3.57□□□□□ -1.84
LINC00561-201ENST00000565815 SLC41A3Q96GZ6 507 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 TMED9Q9BVK6 235 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 BEX2Q9BXY8 128 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 DNTTIP1Q9H147 329 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 CD84Q9UIB8 345 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 MOSPD1Q9UJG1 213 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 ZNF222Q9UK12 451 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 POMT2Q9UKY4 750 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 SLC35A3Q9Y2D2 325 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 USP9XQ93008 2570 aaPredicted RBP3.57□□□□□ -1.84
LINC00561-201ENST00000565815 PIKFYVEQ9Y2I7 2098 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 RIIAD1A6NNX1 92 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 A8MX80 341 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 GABARAPH6UMI1 98 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 I3L521 148 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 AKR7A2O43488 359 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 MTX2O75431 263 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 POP7O75817 140 aaKnown RBP3.57□□□□□ -1.84
LINC00561-201ENST00000565815 AQP8O94778 261 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 IGFBP1P08833 259 aaPredicted RBP3.57□□□□□ -1.84
LINC00561-201ENST00000565815 UCHL1P09936 223 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 CALCBP10092 127 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 PDHA2P29803 388 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 CA7P43166 264 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 SSR2P43308 183 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 GPR1P46091 355 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 ASCL1P50553 236 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 RGS8P57771 180 aaPredicted RBP3.57□□□□□ -1.84
LINC00561-201ENST00000565815 STXBP1P61764 594 aaKnown RBP3.57□□□□□ -1.84
LINC00561-201ENST00000565815 SNTB2Q13425 540 aaKnown RBP3.57□□□□□ -1.84
LINC00561-201ENST00000565815 SLC36A2Q495M3 483 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 SLC35D3Q5M8T2 416 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 DMKNQ6E0U4 476 aaPredicted RBP3.57□□□□□ -1.84
LINC00561-201ENST00000565815 SLC48A1Q6P1K1 146 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 ARHGAP11AQ6P4F7 1023 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 RPL22L1Q6P5R6 122 aaKnown RBP3.57□□□□□ -1.84
LINC00561-201ENST00000565815 C16orf62Q7Z3J2 963 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 HSD17B13Q7Z5P4 300 aaPredicted RBP3.57□□□□□ -1.84
LINC00561-201ENST00000565815 LHFPL3Q86UP9 236 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 AMZ2Q86W34 360 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 TRAPPC5Q8IUR0 188 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 GRAMD2AQ8IUY3 354 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 STPG4Q8N801 248 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 SAMD12Q8N8I0 201 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 FDCSPQ8NFU4 85 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 OR11H7Q8NGC8 314 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 OR4Q3Q8NH05 313 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 RAB8BQ92930 207 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 RBPMSQ93062 196 aaKnown RBP3.57□□□□□ -1.84
LINC00561-201ENST00000565815 YIPF5Q969M3 257 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 EXOSC8Q96B26 276 aaKnown RBP3.57□□□□□ -1.84
LINC00561-201ENST00000565815 COX14Q96I36 57 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 SGK494Q96LW2 274 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 MS4A4EQ96PG1 132 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 MCHR1Q99705 422 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 DPH7Q9BTV6 452 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 PLA2G12AQ9BZM1 189 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 SLC38A1Q9H2H9 487 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 UBQLN3Q9H347 655 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 EGLN3Q9H6Z9 239 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 SCRT2Q9NQ03 307 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 NUDT15Q9NV35 164 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 TAS2R8Q9NYW2 309 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 ASF1AQ9Y294 204 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 C2CD3Q4AC94 2353 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 A0A1W2PS18 150 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 PRR23D1E9PI22 279 aaPredicted RBP3.57□□□□□ -1.84
LINC00561-201ENST00000565815 EEF1E1O43324 174 aaKnown RBP3.57□□□□□ -1.84
LINC00561-201ENST00000565815 SSNA1O43805 119 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 B4GALT2O60909 372 aa3.57□□□□□ -1.84
LINC00561-201ENST00000565815 PRKRAO75569 313 aaKnown RBP3.57□□□□□ -1.84
LINC00561-201ENST00000565815 MTRF1O75570 445 aaKnown RBP3.57□□□□□ -1.84
LINC00561-201ENST00000565815 OR2A4O95047 310 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms