RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 BTNL3Q6UXE8 466 aa10.73□□□□□ -0.69
HDAC1-209ENST00000484305 PLEKHG7Q6ZR37 379 aa10.73□□□□□ -0.69
HDAC1-209ENST00000484305 USP43Q70EL4 1123 aa10.73□□□□□ -0.69
HDAC1-209ENST00000484305 SSX6Q7RTT6 188 aa10.73□□□□□ -0.69
HDAC1-209ENST00000484305 COMMD2Q86X83 199 aa10.73□□□□□ -0.69
HDAC1-209ENST00000484305 BPIFB2Q8N4F0 458 aa10.73□□□□□ -0.69
HDAC1-209ENST00000484305 OR8J1Q8NGP2 316 aa10.73□□□□□ -0.69
HDAC1-209ENST00000484305 HPSE2Q8WWQ2 592 aa10.73□□□□□ -0.69
HDAC1-209ENST00000484305 RPL3LQ92901 407 aaKnown RBP10.73□□□□□ -0.69
HDAC1-209ENST00000484305 UBE2FQ969M7 185 aa10.73□□□□□ -0.69
HDAC1-209ENST00000484305 SEH1LQ96EE3 360 aa10.73□□□□□ -0.69
HDAC1-209ENST00000484305 RNF170Q96K19 258 aa10.73□□□□□ -0.69
HDAC1-209ENST00000484305 MNTQ99583 582 aa10.73□□□□□ -0.69
HDAC1-209ENST00000484305 TBX5Q99593 518 aa10.73□□□□□ -0.69
HDAC1-209ENST00000484305 NUDT16L1Q9BRJ7 211 aaKnown RBP10.73□□□□□ -0.69
HDAC1-209ENST00000484305 RTL8AQ9BWD3 113 aa10.73□□□□□ -0.69
HDAC1-209ENST00000484305 RASSF4Q9H2L5 321 aa10.73□□□□□ -0.69
HDAC1-209ENST00000484305 SMURF1Q9HCE7 757 aa10.73□□□□□ -0.69
HDAC1-209ENST00000484305 TRIM36Q9NQ86 728 aa10.73□□□□□ -0.69
HDAC1-209ENST00000484305 GPR84Q9NQS5 396 aa10.73□□□□□ -0.69
HDAC1-209ENST00000484305 WARS2Q9UGM6 360 aaKnown RBP10.73□□□□□ -0.69
HDAC1-209ENST00000484305 NUFIP1Q9UHK0 495 aaKnown RBP10.73□□□□□ -0.69
HDAC1-209ENST00000484305 MRM2Q9UI43 246 aaKnown RBP10.73□□□□□ -0.69
HDAC1-209ENST00000484305 GTF2A1LQ9UNN4 478 aa10.73□□□□□ -0.69
HDAC1-209ENST00000484305 ZNF816-ZNF321PA0A0X1KG74 233 aa10.72□□□□□ -0.69
HDAC1-209ENST00000484305 KIR2DS1A0A191URI9 304 aa10.72□□□□□ -0.69
HDAC1-209ENST00000484305 C22orf46C9J442 243 aa10.72□□□□□ -0.69
HDAC1-209ENST00000484305 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.72□□□□□ -0.69
HDAC1-209ENST00000484305 EI24O14681 340 aa10.72□□□□□ -0.69
HDAC1-209ENST00000484305 NDUFA2O43678 99 aa10.72□□□□□ -0.69
HDAC1-209ENST00000484305 FCN3O75636 299 aa10.72□□□□□ -0.69
HDAC1-209ENST00000484305 IGLV3-1P01715 115 aa10.72□□□□□ -0.69
HDAC1-209ENST00000484305 TTRP02766 147 aa10.72□□□□□ -0.69
HDAC1-209ENST00000484305 HTR1FP30939 366 aa10.72□□□□□ -0.69
HDAC1-209ENST00000484305 CFHR2P36980 270 aa10.72□□□□□ -0.69
HDAC1-209ENST00000484305 NPY4RP50391 375 aa10.72□□□□□ -0.69
HDAC1-209ENST00000484305 EGR3Q06889 387 aa10.72□□□□□ -0.69
HDAC1-209ENST00000484305 FAM76BQ5HYJ3 339 aa10.72□□□□□ -0.69
HDAC1-209ENST00000484305 KCTD8Q6ZWB6 473 aa10.72□□□□□ -0.69
HDAC1-209ENST00000484305 KRT74Q7RTS7 529 aa10.72□□□□□ -0.69
HDAC1-209ENST00000484305 ZDHHC23Q8IYP9 409 aa10.72□□□□□ -0.69
HDAC1-209ENST00000484305 BCL6BQ8N143 479 aaPredicted RBP10.72□□□□□ -0.69
HDAC1-209ENST00000484305 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.72□□□□□ -0.69
HDAC1-209ENST00000484305 SCCPDHQ8NBX0 429 aa10.72□□□□□ -0.69
HDAC1-209ENST00000484305 FAM81AQ8TBF8 368 aa10.72□□□□□ -0.69
HDAC1-209ENST00000484305 EME1Q96AY2 570 aa10.72□□□□□ -0.69
HDAC1-209ENST00000484305 FAM71F1Q96KD3 344 aaPredicted RBP10.72□□□□□ -0.69
HDAC1-209ENST00000484305 TECTBQ96PL2 329 aa10.72□□□□□ -0.69
HDAC1-209ENST00000484305 SUCNR1Q9BXA5 334 aa10.72□□□□□ -0.69
HDAC1-209ENST00000484305 ABCB9Q9NP78 766 aa10.72□□□□□ -0.69
HDAC1-209ENST00000484305 USE1Q9NZ43 259 aa10.72□□□□□ -0.69
HDAC1-209ENST00000484305 ERVK-18Q9QC07 812 aa10.72□□□□□ -0.69
HDAC1-209ENST00000484305 ZNF69Q9UC07 566 aa10.72□□□□□ -0.69
HDAC1-209ENST00000484305 NUP50Q9UKX7 468 aa10.72□□□□□ -0.69
HDAC1-209ENST00000484305 BOLA1Q9Y3E2 137 aa10.72□□□□□ -0.69
HDAC1-209ENST00000484305 IGHV3OR16-10A0A075B7F0 116 aa10.71□□□□□ -0.69
HDAC1-209ENST00000484305 A0A1B0GW55 424 aa10.71□□□□□ -0.69
HDAC1-209ENST00000484305 A0A1W2PQL4 384 aaPredicted RBP10.71□□□□□ -0.69
HDAC1-209ENST00000484305 TMEM210A6NLX4 147 aa10.71□□□□□ -0.69
HDAC1-209ENST00000484305 SRRM5B3KS81 715 aa10.71□□□□□ -0.69
HDAC1-209ENST00000484305 LOC110117498-PIK3R3F6TDL0 507 aa10.71□□□□□ -0.69
HDAC1-209ENST00000484305 DUX4L2P0CJ85 424 aa10.71□□□□□ -0.69
HDAC1-209ENST00000484305 DUX4L3P0CJ86 424 aa10.71□□□□□ -0.69
HDAC1-209ENST00000484305 DUX4L4P0CJ87 422 aa10.71□□□□□ -0.69
HDAC1-209ENST00000484305 DUX4L5P0CJ88 424 aa10.71□□□□□ -0.69
HDAC1-209ENST00000484305 DUX4L6P0CJ89 424 aa10.71□□□□□ -0.69
HDAC1-209ENST00000484305 DUX4L7P0CJ90 424 aa10.71□□□□□ -0.69
HDAC1-209ENST00000484305 PPIAL4GP0DN37 164 aa10.71□□□□□ -0.69
HDAC1-209ENST00000484305 IGHV4-38-2P0DP08 117 aa10.71□□□□□ -0.69
HDAC1-209ENST00000484305 MUC1P15941 1255 aaPredicted RBP10.71□□□□□ -0.69
HDAC1-209ENST00000484305 FAHP16930 419 aa10.71□□□□□ -0.69
HDAC1-209ENST00000484305 FPR2P25090 351 aa10.71□□□□□ -0.69
HDAC1-209ENST00000484305 GPM6AP51674 278 aa10.71□□□□□ -0.69
HDAC1-209ENST00000484305 CDC42P60953 191 aa10.71□□□□□ -0.69
HDAC1-209ENST00000484305 GMFBP60983 142 aa10.71□□□□□ -0.69
HDAC1-209ENST00000484305 RIPPLY1Q0D2K3 151 aa10.71□□□□□ -0.69
HDAC1-209ENST00000484305 MICBQ29980 383 aa10.71□□□□□ -0.69
HDAC1-209ENST00000484305 TUSC1Q2TAM9 212 aa10.71□□□□□ -0.69
HDAC1-209ENST00000484305 ZIK1Q3SY52 487 aaPredicted RBP10.71□□□□□ -0.69
HDAC1-209ENST00000484305 CEP78Q5JTW2 689 aa10.71□□□□□ -0.69
HDAC1-209ENST00000484305 DUX4L9Q6RFH8 374 aaPredicted RBP10.71□□□□□ -0.69
HDAC1-209ENST00000484305 ELMOD2Q8IZ81 293 aa10.71□□□□□ -0.69
HDAC1-209ENST00000484305 UPRTQ96BW1 309 aa10.71□□□□□ -0.69
HDAC1-209ENST00000484305 HRASLS5Q96KN8 279 aa10.71□□□□□ -0.69
HDAC1-209ENST00000484305 CCL13Q99616 98 aa10.71□□□□□ -0.69
HDAC1-209ENST00000484305 DUX4Q9UBX2 424 aa10.71□□□□□ -0.69
HDAC1-209ENST00000484305 PIGLQ9Y2B2 252 aa10.71□□□□□ -0.69
HDAC1-209ENST00000484305 R4GMQ9 66 aa10.71□□□□□ -0.69
HDAC1-209ENST00000484305 E9PQ18 207 aa10.7□□□□□ -0.7
HDAC1-209ENST00000484305 DVL1O14640 695 aa10.7□□□□□ -0.7
HDAC1-209ENST00000484305 TMPRSS2O15393 492 aa10.7□□□□□ -0.7
HDAC1-209ENST00000484305 ENSAO43768 121 aaKnown RBP10.7□□□□□ -0.7
HDAC1-209ENST00000484305 RPP14O95059 124 aaKnown RBP10.7□□□□□ -0.7
HDAC1-209ENST00000484305 OR2T7P0C7T2 308 aa10.7□□□□□ -0.7
HDAC1-209ENST00000484305 ATP6V1B1P15313 513 aa10.7□□□□□ -0.7
HDAC1-209ENST00000484305 ALDH3A2P51648 485 aa10.7□□□□□ -0.7
HDAC1-209ENST00000484305 CEACAM21Q3KPI0 293 aa10.7□□□□□ -0.7
HDAC1-209ENST00000484305 WDR38Q5JTN6 314 aa10.7□□□□□ -0.7
HDAC1-209ENST00000484305 ZNF684Q5T5D7 378 aa10.7□□□□□ -0.7
HDAC1-209ENST00000484305 BCL2L15Q5TBC7 163 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms